RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 NXPE4Q6UWF7 544 aa24.75■■□□□ 1.55
COL13A1-213ENST00000520267 DCP2Q8IU60 420 aaKnown RBP24.75■■□□□ 1.55
COL13A1-213ENST00000520267 C2orf73Q8N5S3 287 aaPredicted RBP24.75■■□□□ 1.55
COL13A1-213ENST00000520267 ARL10Q8N8L6 244 aa24.75■■□□□ 1.55
COL13A1-213ENST00000520267 VPS37AQ8NEZ2 397 aa24.75■■□□□ 1.55
COL13A1-213ENST00000520267 CHST8Q9H2A9 424 aa24.75■■□□□ 1.55
COL13A1-213ENST00000520267 OR52A5Q9H2C5 316 aa24.75■■□□□ 1.55
COL13A1-213ENST00000520267 CCDC177Q9NQR7 707 aaPredicted RBP24.75■■□□□ 1.55
COL13A1-213ENST00000520267 RPS6KA6Q9UK32 745 aa24.75■■□□□ 1.55
COL13A1-213ENST00000520267 hCG_2039718K7EN88 272 aa24.75■■□□□ 1.55
COL13A1-213ENST00000520267 FCARP24071 287 aa24.75■■□□□ 1.55
COL13A1-213ENST00000520267 RAB39AQ14964 217 aa24.75■■□□□ 1.55
COL13A1-213ENST00000520267 PAGE2BQ5JRK9 111 aa24.75■■□□□ 1.55
COL13A1-213ENST00000520267 TANGO2Q6ICL3 276 aa24.75■■□□□ 1.55
COL13A1-213ENST00000520267 ERI1Q8IV48 349 aaKnown RBP24.75■■□□□ 1.55
COL13A1-213ENST00000520267 ZNF740Q8NDX6 193 aa24.75■■□□□ 1.55
COL13A1-213ENST00000520267 WDR48Q8TAF3 677 aa24.75■■□□□ 1.55
COL13A1-213ENST00000520267 ZFP90Q8TF47 636 aa24.75■■□□□ 1.55
COL13A1-213ENST00000520267 ISOC1Q96CN7 298 aa24.75■■□□□ 1.55
COL13A1-213ENST00000520267 CDC14AQ9UNH5 594 aa24.75■■□□□ 1.55
COL13A1-213ENST00000520267 MAPRE3Q9UPY8 281 aa24.75■■□□□ 1.55
COL13A1-213ENST00000520267 ZNF763Q0D2J5 394 aa24.74■■□□□ 1.55
COL13A1-213ENST00000520267 LAPTM4AQ15012 233 aa24.74■■□□□ 1.55
COL13A1-213ENST00000520267 IER5LQ5T953 404 aa24.74■■□□□ 1.55
COL13A1-213ENST00000520267 SHQ1Q6PI26 577 aaKnown RBP24.74■■□□□ 1.55
COL13A1-213ENST00000520267 CBLL1Q75N03 491 aa24.74■■□□□ 1.55
COL13A1-213ENST00000520267 CEP68Q76N32 757 aa24.74■■□□□ 1.55
COL13A1-213ENST00000520267 OR5AR1Q8NGP9 310 aa24.74■■□□□ 1.55
COL13A1-213ENST00000520267 PUM2Q8TB72 1066 aaKnown RBP eCLIP24.74■■□□□ 1.55
COL13A1-213ENST00000520267 EHD1Q9H4M9 534 aa24.74■■□□□ 1.55
COL13A1-213ENST00000520267 CXorf21Q9HAI6 301 aa24.74■■□□□ 1.55
COL13A1-213ENST00000520267 SLC23A2Q9UGH3 650 aa24.74■■□□□ 1.55
COL13A1-213ENST00000520267 ATP6V1HQ9UI12 483 aa24.74■■□□□ 1.55
COL13A1-213ENST00000520267 C3orf18Q9UK00 162 aa24.74■■□□□ 1.55
COL13A1-213ENST00000520267 ASF1AQ9Y294 204 aa24.74■■□□□ 1.55
COL13A1-213ENST00000520267 C1QTNF3-AMACRE9PGA6 284 aa24.74■■□□□ 1.55
COL13A1-213ENST00000520267 DIRAS1O95057 198 aa24.74■■□□□ 1.55
COL13A1-213ENST00000520267 ABCB1P08183 1280 aaPredicted RBP24.74■■□□□ 1.55
COL13A1-213ENST00000520267 EEF1B2P24534 225 aaKnown RBP24.74■■□□□ 1.55
COL13A1-213ENST00000520267 TPD52P55327 224 aaPredicted RBP24.74■■□□□ 1.55
COL13A1-213ENST00000520267 VLDLRP98155 873 aa24.74■■□□□ 1.55
COL13A1-213ENST00000520267 HIST2H2ACQ16777 129 aaPredicted RBP24.74■■□□□ 1.55
COL13A1-213ENST00000520267 TMEM259Q4ZIN3 620 aa24.74■■□□□ 1.55
COL13A1-213ENST00000520267 HIST2H2AA3Q6FI13 130 aa24.74■■□□□ 1.55
COL13A1-213ENST00000520267 OR2T5Q6IEZ7 315 aa24.74■■□□□ 1.55
COL13A1-213ENST00000520267 ZNF773Q6PK81 442 aa24.74■■□□□ 1.55
COL13A1-213ENST00000520267 TMEM26Q6ZUK4 368 aa24.74■■□□□ 1.55
COL13A1-213ENST00000520267 EIF3MQ7L2H7 374 aaKnown RBP24.74■■□□□ 1.55
COL13A1-213ENST00000520267 OR4K1Q8NGD4 311 aa24.74■■□□□ 1.55
COL13A1-213ENST00000520267 OR4A15Q8NGL6 344 aa24.74■■□□□ 1.55
COL13A1-213ENST00000520267 OR2T29Q8NH02 315 aa24.74■■□□□ 1.55
COL13A1-213ENST00000520267 COX14Q96I36 57 aa24.74■■□□□ 1.55
COL13A1-213ENST00000520267 HSH2DQ96JZ2 352 aa24.74■■□□□ 1.55
COL13A1-213ENST00000520267 HDAC8Q9BY41 377 aa24.74■■□□□ 1.55
COL13A1-213ENST00000520267 MTIF3Q9H2K0 278 aaKnown RBP24.74■■□□□ 1.55
COL13A1-213ENST00000520267 ADNPQ9H2P0 1102 aa24.74■■□□□ 1.55
COL13A1-213ENST00000520267 SIRT5Q9NXA8 310 aa24.74■■□□□ 1.55
COL13A1-213ENST00000520267 KLHL18O94889 574 aa24.73■■□□□ 1.55
COL13A1-213ENST00000520267 NTRK1P04629 796 aa24.73■■□□□ 1.55
COL13A1-213ENST00000520267 MC1RQ01726 317 aa24.73■■□□□ 1.55
COL13A1-213ENST00000520267 PDGFRLQ15198 375 aa24.73■■□□□ 1.55
COL13A1-213ENST00000520267 RGNQ15493 299 aa24.73■■□□□ 1.55
COL13A1-213ENST00000520267 NEDD8Q15843 81 aa24.73■■□□□ 1.55
COL13A1-213ENST00000520267 MEP1AQ16819 746 aa24.73■■□□□ 1.55
COL13A1-213ENST00000520267 CTU2Q2VPK5 515 aaKnown RBP24.73■■□□□ 1.55
COL13A1-213ENST00000520267 PIP5KL1Q5T9C9 394 aa24.73■■□□□ 1.55
COL13A1-213ENST00000520267 CPA6Q8N4T0 437 aa24.73■■□□□ 1.55
COL13A1-213ENST00000520267 TBC1D20Q96BZ9 403 aa24.73■■□□□ 1.55
COL13A1-213ENST00000520267 NRTNQ99748 197 aa24.73■■□□□ 1.55
COL13A1-213ENST00000520267 REEP4Q9H6H4 257 aa24.73■■□□□ 1.55
COL13A1-213ENST00000520267 SFXN1Q9H9B4 322 aa24.73■■□□□ 1.55
COL13A1-213ENST00000520267 TM9SF3Q9HD45 589 aa24.73■■□□□ 1.55
COL13A1-213ENST00000520267 LOC100130705A0A1B0GUX0 176 aa24.73■■□□□ 1.55
COL13A1-213ENST00000520267 RNASET2O00584 256 aaKnown RBP24.73■■□□□ 1.55
COL13A1-213ENST00000520267 FABP3P05413 133 aa24.73■■□□□ 1.55
COL13A1-213ENST00000520267 CRHBPP24387 322 aa24.73■■□□□ 1.55
COL13A1-213ENST00000520267 VEZF1Q14119 521 aa24.73■■□□□ 1.55
COL13A1-213ENST00000520267 DUSP6Q16828 381 aa24.73■■□□□ 1.55
COL13A1-213ENST00000520267 RBM48Q5RL73 367 aaKnown RBP24.73■■□□□ 1.55
COL13A1-213ENST00000520267 VITQ6UXI7 678 aa24.73■■□□□ 1.55
COL13A1-213ENST00000520267 UNC5DQ6UXZ4 953 aa24.73■■□□□ 1.55
COL13A1-213ENST00000520267 DSG4Q86SJ6 1040 aa24.73■■□□□ 1.55
COL13A1-213ENST00000520267 HEATR4Q86WZ0 1026 aa24.73■■□□□ 1.55
COL13A1-213ENST00000520267 CACUL1Q86Y37 369 aa24.73■■□□□ 1.55
COL13A1-213ENST00000520267 CHDHQ8NE62 594 aaPredicted RBP24.73■■□□□ 1.55
COL13A1-213ENST00000520267 THAP10Q9P2Z0 257 aaPredicted RBP24.73■■□□□ 1.55
COL13A1-213ENST00000520267 VPS4AQ9UN37 437 aa24.73■■□□□ 1.55
COL13A1-213ENST00000520267 MITFO75030 526 aaPredicted RBP24.72■■□□□ 1.55
COL13A1-213ENST00000520267 PCCBP05166 539 aa24.72■■□□□ 1.55
COL13A1-213ENST00000520267 DDX59Q5T1V6 619 aaKnown RBP eCLIP24.72■■□□□ 1.55
COL13A1-213ENST00000520267 EGFLAMQ63HQ2 1017 aa24.72■■□□□ 1.55
COL13A1-213ENST00000520267 R3HCC1LQ7Z5L2 792 aaKnown RBP24.72■■□□□ 1.55
COL13A1-213ENST00000520267 CYP4Z1Q86W10 505 aa24.72■■□□□ 1.55
COL13A1-213ENST00000520267 SGCDQ92629 289 aa24.72■■□□□ 1.55
COL13A1-213ENST00000520267 MAL2Q969L2 176 aa24.72■■□□□ 1.55
COL13A1-213ENST00000520267 C12orf43Q96C57 262 aaKnown RBP24.72■■□□□ 1.55
COL13A1-213ENST00000520267 LGR4Q9BXB1 951 aa24.72■■□□□ 1.55
COL13A1-213ENST00000520267 BHLHE41Q9C0J9 482 aaPredicted RBP24.72■■□□□ 1.55
COL13A1-213ENST00000520267 HEMK1Q9Y5R4 338 aaPredicted RBP24.72■■□□□ 1.55
COL13A1-213ENST00000520267 FKBP9O95302 570 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms