RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 TDHQ8IZJ6 230 aa4.78□□□□□ -1.64
HMGB1P46-201ENST00000520062 ZNF444Q8N0Y2 327 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P46-201ENST00000520062 LRTM2Q8N967 370 aa4.78□□□□□ -1.64
HMGB1P46-201ENST00000520062 Q8N9P0 234 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P46-201ENST00000520062 OR7A2PQ8NGA2 310 aa4.78□□□□□ -1.64
HMGB1P46-201ENST00000520062 LMO3Q8TAP4 145 aa4.78□□□□□ -1.64
HMGB1P46-201ENST00000520062 KIAA1524Q8TCG1 905 aa4.78□□□□□ -1.64
HMGB1P46-201ENST00000520062 FCAMRQ8WWV6 532 aa4.78□□□□□ -1.64
HMGB1P46-201ENST00000520062 GGHQ92820 318 aa4.78□□□□□ -1.64
HMGB1P46-201ENST00000520062 ZBTB9Q96C00 473 aa4.78□□□□□ -1.64
HMGB1P46-201ENST00000520062 LMLNQ96KR4 655 aa4.78□□□□□ -1.64
HMGB1P46-201ENST00000520062 ZNF354BQ96LW1 612 aa4.78□□□□□ -1.64
HMGB1P46-201ENST00000520062 TRMT61BQ9BVS5 477 aaKnown RBP4.78□□□□□ -1.64
HMGB1P46-201ENST00000520062 TEX13AQ9BXU3 409 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P46-201ENST00000520062 C5orf66Q9H5L9 145 aa4.78□□□□□ -1.64
HMGB1P46-201ENST00000520062 PPANQ9NQ55 473 aaKnown RBP4.78□□□□□ -1.64
HMGB1P46-201ENST00000520062 EPS15L1Q9UBC2 864 aa4.78□□□□□ -1.64
HMGB1P46-201ENST00000520062 ISY1Q9ULR0 285 aaKnown RBP4.78□□□□□ -1.64
HMGB1P46-201ENST00000520062 KCNJ14Q9UNX9 436 aa4.78□□□□□ -1.64
HMGB1P46-201ENST00000520062 PIN4Q9Y237 131 aaKnown RBP4.78□□□□□ -1.64
HMGB1P46-201ENST00000520062 KCNK6Q9Y257 313 aa4.78□□□□□ -1.64
HMGB1P46-201ENST00000520062 MTF2Q9Y483 593 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P46-201ENST00000520062 NPHP3Q7Z494 1330 aa4.77□□□□□ -1.65
HMGB1P46-201ENST00000520062 E5RGE8 158 aa4.77□□□□□ -1.65
HMGB1P46-201ENST00000520062 M0R296 226 aa4.77□□□□□ -1.65
HMGB1P46-201ENST00000520062 EPHB6O15197 1021 aa4.77□□□□□ -1.65
HMGB1P46-201ENST00000520062 CLN5O75503 358 aa4.77□□□□□ -1.65
HMGB1P46-201ENST00000520062 B3GALNT1O75752 331 aa4.77□□□□□ -1.65
HMGB1P46-201ENST00000520062 EDN1P05305 212 aa4.77□□□□□ -1.65
HMGB1P46-201ENST00000520062 CPA3P15088 417 aa4.77□□□□□ -1.65
HMGB1P46-201ENST00000520062 GOT1P17174 413 aa4.77□□□□□ -1.65
HMGB1P46-201ENST00000520062 RBMS1P29558 406 aaKnown RBP4.77□□□□□ -1.65
HMGB1P46-201ENST00000520062 ALDH1B1P30837 517 aa4.77□□□□□ -1.65
HMGB1P46-201ENST00000520062 CEACAM8P31997 349 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P46-201ENST00000520062 CD86P42081 329 aa4.77□□□□□ -1.65
HMGB1P46-201ENST00000520062 DNA2P51530 1060 aa4.77□□□□□ -1.65
HMGB1P46-201ENST00000520062 CLCN4P51793 760 aa4.77□□□□□ -1.65
HMGB1P46-201ENST00000520062 FKBP1BP68106 108 aa4.77□□□□□ -1.65
HMGB1P46-201ENST00000520062 TRIM29Q14134 588 aa4.77□□□□□ -1.65
HMGB1P46-201ENST00000520062 GAMTQ14353 236 aa4.77□□□□□ -1.65
HMGB1P46-201ENST00000520062 SLC25A53Q5H9E4 307 aa4.77□□□□□ -1.65
HMGB1P46-201ENST00000520062 CATSPER4Q7RTX7 472 aa4.77□□□□□ -1.65
HMGB1P46-201ENST00000520062 COX8CQ7Z4L0 72 aa4.77□□□□□ -1.65
HMGB1P46-201ENST00000520062 PIGZQ86VD9 579 aa4.77□□□□□ -1.65
HMGB1P46-201ENST00000520062 KIRREL3Q8IZU9 778 aa4.77□□□□□ -1.65
HMGB1P46-201ENST00000520062 FAM89BQ8N5H3 189 aa4.77□□□□□ -1.65
HMGB1P46-201ENST00000520062 TEX9Q8N6V9 391 aa4.77□□□□□ -1.65
HMGB1P46-201ENST00000520062 GBP7Q8N8V2 638 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P46-201ENST00000520062 OR4C15Q8NGM1 316 aa4.77□□□□□ -1.65
HMGB1P46-201ENST00000520062 EXOC6Q8TAG9 804 aa4.77□□□□□ -1.65
HMGB1P46-201ENST00000520062 RSPH1Q8WYR4 309 aa4.77□□□□□ -1.65
HMGB1P46-201ENST00000520062 TM9SF4Q92544 642 aa4.77□□□□□ -1.65
HMGB1P46-201ENST00000520062 TMEM143Q96AN5 459 aa4.77□□□□□ -1.65
HMGB1P46-201ENST00000520062 TMEM186Q96B77 213 aa4.77□□□□□ -1.65
HMGB1P46-201ENST00000520062 SLCO4A1Q96BD0 722 aa4.77□□□□□ -1.65
HMGB1P46-201ENST00000520062 ULK4Q96C45 1275 aa4.77□□□□□ -1.65
HMGB1P46-201ENST00000520062 TBC1D31Q96DN5 1066 aa4.77□□□□□ -1.65
HMGB1P46-201ENST00000520062 LGALS12Q96DT0 336 aa4.77□□□□□ -1.65
HMGB1P46-201ENST00000520062 ALG14Q96F25 216 aa4.77□□□□□ -1.65
HMGB1P46-201ENST00000520062 PKP2Q99959 881 aa4.77□□□□□ -1.65
HMGB1P46-201ENST00000520062 HSD3B7Q9H2F3 369 aa4.77□□□□□ -1.65
HMGB1P46-201ENST00000520062 BICC1Q9H694 974 aaKnown RBP4.77□□□□□ -1.65
HMGB1P46-201ENST00000520062 ZFP57Q9NU63 452 aa4.77□□□□□ -1.65
HMGB1P46-201ENST00000520062 NINJ2Q9NZG7 142 aa4.77□□□□□ -1.65
HMGB1P46-201ENST00000520062 UBQLN2Q9UHD9 624 aa4.77□□□□□ -1.65
HMGB1P46-201ENST00000520062 FBXL4Q9UKA2 621 aa4.77□□□□□ -1.65
HMGB1P46-201ENST00000520062 NSG2Q9Y328 171 aa4.77□□□□□ -1.65
HMGB1P46-201ENST00000520062 STRAPQ9Y3F4 350 aaKnown RBP4.77□□□□□ -1.65
HMGB1P46-201ENST00000520062 C2orf92A0A1B0GVN3 265 aa4.76□□□□□ -1.65
HMGB1P46-201ENST00000520062 H3BMM5 538 aa4.76□□□□□ -1.65
HMGB1P46-201ENST00000520062 KLF11O14901 512 aa4.76□□□□□ -1.65
HMGB1P46-201ENST00000520062 BUB3O43684 328 aa4.76□□□□□ -1.65
HMGB1P46-201ENST00000520062 STAM2O75886 525 aa4.76□□□□□ -1.65
HMGB1P46-201ENST00000520062 CAVIN2O95810 425 aa4.76□□□□□ -1.65
HMGB1P46-201ENST00000520062 GAS8O95995 478 aa4.76□□□□□ -1.65
HMGB1P46-201ENST00000520062 F7P08709 466 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P46-201ENST00000520062 FERP16591 822 aa4.76□□□□□ -1.65
HMGB1P46-201ENST00000520062 SRD5A2P31213 254 aa4.76□□□□□ -1.65
HMGB1P46-201ENST00000520062 SMSP52788 366 aa4.76□□□□□ -1.65
HMGB1P46-201ENST00000520062 RBM39Q14498 530 aaKnown RBP4.76□□□□□ -1.65
HMGB1P46-201ENST00000520062 SQLEQ14534 574 aa4.76□□□□□ -1.65
HMGB1P46-201ENST00000520062 PDK1Q15118 436 aa4.76□□□□□ -1.65
HMGB1P46-201ENST00000520062 ZNF542PQ5EBM4 170 aa4.76□□□□□ -1.65
HMGB1P46-201ENST00000520062 GDPD4Q6W3E5 623 aa4.76□□□□□ -1.65
HMGB1P46-201ENST00000520062 BATF2Q8N1L9 274 aa4.76□□□□□ -1.65
HMGB1P46-201ENST00000520062 SIDT2Q8NBJ9 832 aaKnown RBP4.76□□□□□ -1.65
HMGB1P46-201ENST00000520062 ANKRD20A12PQ8NF67 263 aa4.76□□□□□ -1.65
HMGB1P46-201ENST00000520062 RFT1Q96AA3 541 aa4.76□□□□□ -1.65
HMGB1P46-201ENST00000520062 ZNF560Q96MR9 790 aa4.76□□□□□ -1.65
HMGB1P46-201ENST00000520062 LPAR4Q99677 370 aa4.76□□□□□ -1.65
HMGB1P46-201ENST00000520062 LRRC2Q9BYS8 371 aa4.76□□□□□ -1.65
HMGB1P46-201ENST00000520062 WWTR1Q9GZV5 400 aa4.76□□□□□ -1.65
HMGB1P46-201ENST00000520062 THAP2Q9H0W7 228 aa4.76□□□□□ -1.65
HMGB1P46-201ENST00000520062 SYTL2Q9HCH5 934 aa4.76□□□□□ -1.65
HMGB1P46-201ENST00000520062 PANK4Q9NVE7 773 aa4.76□□□□□ -1.65
HMGB1P46-201ENST00000520062 HPF1Q9NWY4 346 aa4.76□□□□□ -1.65
HMGB1P46-201ENST00000520062 DONSONQ9NYP3 566 aa4.76□□□□□ -1.65
HMGB1P46-201ENST00000520062 OR6C2Q9NZP2 312 aa4.76□□□□□ -1.65
HMGB1P46-201ENST00000520062 PILRBQ9UKJ0 227 aa4.76□□□□□ -1.65
HMGB1P46-201ENST00000520062 PRDM4Q9UKN5 801 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms