RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 ZNF480Q8WV37 535 aa10.66□□□□□ -0.7
CTNNA1-205ENST00000517904 ASB5Q8WWX0 329 aa10.66□□□□□ -0.7
CTNNA1-205ENST00000517904 TSLPQ969D9 159 aa10.66□□□□□ -0.7
CTNNA1-205ENST00000517904 CCDC138Q96M89 665 aa10.66□□□□□ -0.7
CTNNA1-205ENST00000517904 FOXC2Q99958 501 aa10.66□□□□□ -0.7
CTNNA1-205ENST00000517904 RBCK1Q9BYM8 510 aa10.66□□□□□ -0.7
CTNNA1-205ENST00000517904 CDCP1Q9H5V8 836 aa10.66□□□□□ -0.7
CTNNA1-205ENST00000517904 LANCL2Q9NS86 450 aa10.66□□□□□ -0.7
CTNNA1-205ENST00000517904 TREX1Q9NSU2 369 aa10.66□□□□□ -0.7
CTNNA1-205ENST00000517904 CCM2LQ9NUG4 571 aaPredicted RBP10.66□□□□□ -0.7
CTNNA1-205ENST00000517904 ABCF3Q9NUQ8 709 aa10.66□□□□□ -0.7
CTNNA1-205ENST00000517904 ZNF407Q9C0G0 2248 aa10.66□□□□□ -0.7
CTNNA1-205ENST00000517904 GOLGA6L9A6NEM1 432 aa10.65□□□□□ -0.7
CTNNA1-205ENST00000517904 H7BY64 318 aa10.65□□□□□ -0.7
CTNNA1-205ENST00000517904 NDC80O14777 642 aa10.65□□□□□ -0.7
CTNNA1-205ENST00000517904 RDH16O75452 317 aa10.65□□□□□ -0.7
CTNNA1-205ENST00000517904 NDUFS3O75489 264 aa10.65□□□□□ -0.7
CTNNA1-205ENST00000517904 CDC123O75794 336 aaPredicted RBP10.65□□□□□ -0.7
CTNNA1-205ENST00000517904 CCNDBP1O95273 360 aa10.65□□□□□ -0.7
CTNNA1-205ENST00000517904 HOXD4P09016 255 aaPredicted RBP10.65□□□□□ -0.7
CTNNA1-205ENST00000517904 ARNTP27540 789 aa10.65□□□□□ -0.7
CTNNA1-205ENST00000517904 FMO4P31512 558 aa10.65□□□□□ -0.7
CTNNA1-205ENST00000517904 CETN2P41208 172 aa10.65□□□□□ -0.7
CTNNA1-205ENST00000517904 CRADDP78560 199 aa10.65□□□□□ -0.7
CTNNA1-205ENST00000517904 ABATP80404 500 aa10.65□□□□□ -0.7
CTNNA1-205ENST00000517904 KCNJ11Q14654 390 aa10.65□□□□□ -0.7
CTNNA1-205ENST00000517904 NSDHLQ15738 373 aa10.65□□□□□ -0.7
CTNNA1-205ENST00000517904 KLHL38Q2WGJ6 581 aa10.65□□□□□ -0.7
CTNNA1-205ENST00000517904 CMPK2Q5EBM0 449 aa10.65□□□□□ -0.7
CTNNA1-205ENST00000517904 ACSBG2Q5FVE4 666 aa10.65□□□□□ -0.7
CTNNA1-205ENST00000517904 EMC4Q5J8M3 183 aa10.65□□□□□ -0.7
CTNNA1-205ENST00000517904 TMEM214Q6NUQ4 689 aaKnown RBP10.65□□□□□ -0.7
CTNNA1-205ENST00000517904 PRUNE1Q86TP1 453 aa10.65□□□□□ -0.7
CTNNA1-205ENST00000517904 RPS19BP1Q86WX3 136 aaKnown RBP10.65□□□□□ -0.7
CTNNA1-205ENST00000517904 MPP5Q8N3R9 675 aa10.65□□□□□ -0.7
CTNNA1-205ENST00000517904 LRRC57Q8N9N7 239 aa10.65□□□□□ -0.7
CTNNA1-205ENST00000517904 PPHLN1Q8NEY8 458 aaKnown RBP10.65□□□□□ -0.7
CTNNA1-205ENST00000517904 ZCCHC10Q8TBK6 192 aa10.65□□□□□ -0.7
CTNNA1-205ENST00000517904 ATG4AQ8WYN0 398 aa10.65□□□□□ -0.7
CTNNA1-205ENST00000517904 LPGAT1Q92604 370 aa10.65□□□□□ -0.7
CTNNA1-205ENST00000517904 PRAP1Q96NZ9 151 aa10.65□□□□□ -0.7
CTNNA1-205ENST00000517904 LPAR4Q99677 370 aa10.65□□□□□ -0.7
CTNNA1-205ENST00000517904 LIME1Q9H400 295 aa10.65□□□□□ -0.7
CTNNA1-205ENST00000517904 TRIM45Q9H8W5 580 aaPredicted RBP10.65□□□□□ -0.7
CTNNA1-205ENST00000517904 KCNJ16Q9NPI9 418 aa10.65□□□□□ -0.7
CTNNA1-205ENST00000517904 DLL4Q9NR61 685 aa10.65□□□□□ -0.7
CTNNA1-205ENST00000517904 UTP6Q9NYH9 597 aaKnown RBP10.65□□□□□ -0.7
CTNNA1-205ENST00000517904 KCNN3Q9UGI6 736 aa10.65□□□□□ -0.7
CTNNA1-205ENST00000517904 PHF3Q92576 2039 aaKnown RBP10.65□□□□□ -0.71
CTNNA1-205ENST00000517904 SMAPO00193 183 aa10.64□□□□□ -0.71
CTNNA1-205ENST00000517904 TFECO14948 347 aaPredicted RBP10.64□□□□□ -0.71
CTNNA1-205ENST00000517904 HS6ST1O60243 411 aa10.64□□□□□ -0.71
CTNNA1-205ENST00000517904 CDC40O60508 579 aaKnown RBP eCLIP10.64□□□□□ -0.71
CTNNA1-205ENST00000517904 FAM155BO75949 473 aa10.64□□□□□ -0.71
CTNNA1-205ENST00000517904 PTMAP06454 111 aaKnown RBP10.64□□□□□ -0.71
CTNNA1-205ENST00000517904 NMBRP28336 390 aa10.64□□□□□ -0.71
CTNNA1-205ENST00000517904 FDFT1P37268 417 aa10.64□□□□□ -0.71
CTNNA1-205ENST00000517904 CYB561P49447 251 aa10.64□□□□□ -0.71
CTNNA1-205ENST00000517904 MEOX1P50221 254 aa10.64□□□□□ -0.71
CTNNA1-205ENST00000517904 ITGA8P53708 1063 aa10.64□□□□□ -0.71
CTNNA1-205ENST00000517904 TAS2R50P59544 299 aa10.64□□□□□ -0.71
CTNNA1-205ENST00000517904 ACTN3Q08043 901 aaPredicted RBP10.64□□□□□ -0.71
CTNNA1-205ENST00000517904 FOXD4Q12950 439 aaPredicted RBP10.64□□□□□ -0.71
CTNNA1-205ENST00000517904 MYBPHQ13203 477 aa10.64□□□□□ -0.71
CTNNA1-205ENST00000517904 PCID2Q5JVF3 399 aa10.64□□□□□ -0.71
CTNNA1-205ENST00000517904 TC2NQ8N9U0 490 aa10.64□□□□□ -0.71
CTNNA1-205ENST00000517904 KCT2Q8NC54 265 aa10.64□□□□□ -0.71
CTNNA1-205ENST00000517904 CHDHQ8NE62 594 aaPredicted RBP10.64□□□□□ -0.71
CTNNA1-205ENST00000517904 PLPP5Q8NEB5 264 aa10.64□□□□□ -0.71
CTNNA1-205ENST00000517904 MCOLN3Q8TDD5 553 aa10.64□□□□□ -0.71
CTNNA1-205ENST00000517904 SEC16BQ96JE7 1060 aa10.64□□□□□ -0.71
CTNNA1-205ENST00000517904 FAM114A2Q9NRY5 505 aa10.64□□□□□ -0.71
CTNNA1-205ENST00000517904 PLSCR2Q9NRY7 297 aa10.64□□□□□ -0.71
CTNNA1-205ENST00000517904 PACSIN2Q9UNF0 486 aaPredicted RBP10.64□□□□□ -0.71
CTNNA1-205ENST00000517904 JMJD1CQ15652 2540 aa10.63□□□□□ -0.71
CTNNA1-205ENST00000517904 KCNE1BA0A087WTH5 132 aa10.63□□□□□ -0.71
CTNNA1-205ENST00000517904 GRID2IPA4D2P6 1211 aa10.63□□□□□ -0.71
CTNNA1-205ENST00000517904 ZNF860A6NHJ4 632 aa10.63□□□□□ -0.71
CTNNA1-205ENST00000517904 MAGEB17A8MXT2 336 aa10.63□□□□□ -0.71
CTNNA1-205ENST00000517904 GOLGA8KD6RF30 607 aa10.63□□□□□ -0.71
CTNNA1-205ENST00000517904 E7EVH7 732 aa10.63□□□□□ -0.71
CTNNA1-205ENST00000517904 GOLGA8TH3BQL2 631 aa10.63□□□□□ -0.71
CTNNA1-205ENST00000517904 KIF5CO60282 957 aa10.63□□□□□ -0.71
CTNNA1-205ENST00000517904 DNAJB6O75190 326 aa10.63□□□□□ -0.71
CTNNA1-205ENST00000517904 ZWINTO95229 277 aa10.63□□□□□ -0.71
CTNNA1-205ENST00000517904 IFNB1P01574 187 aa10.63□□□□□ -0.71
CTNNA1-205ENST00000517904 CATP04040 527 aaKnown RBP10.63□□□□□ -0.71
CTNNA1-205ENST00000517904 APRTP07741 180 aa10.63□□□□□ -0.71
CTNNA1-205ENST00000517904 DRD2P14416 443 aa10.63□□□□□ -0.71
CTNNA1-205ENST00000517904 ETS1P14921 441 aa10.63□□□□□ -0.71
CTNNA1-205ENST00000517904 TFEBP19484 476 aa10.63□□□□□ -0.71
CTNNA1-205ENST00000517904 TRHRP34981 398 aaPredicted RBP10.63□□□□□ -0.71
CTNNA1-205ENST00000517904 HSD17B2P37059 387 aa10.63□□□□□ -0.71
CTNNA1-205ENST00000517904 NUP107P57740 925 aa10.63□□□□□ -0.71
CTNNA1-205ENST00000517904 SESN2P58004 480 aaPredicted RBP10.63□□□□□ -0.71
CTNNA1-205ENST00000517904 OR4D2P58180 307 aa10.63□□□□□ -0.71
CTNNA1-205ENST00000517904 MLF1P58340 268 aa10.63□□□□□ -0.71
CTNNA1-205ENST00000517904 PPP2R2AP63151 447 aa10.63□□□□□ -0.71
CTNNA1-205ENST00000517904 SPA17Q15506 151 aa10.63□□□□□ -0.71
CTNNA1-205ENST00000517904 OASLQ15646 514 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms