RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 RD3Q7Z3Z2 195 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 HSD11B1LQ7Z5J1 315 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 FAM129CQ86XR2 697 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 FAM90A1Q86YD7 464 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 KLHL7Q8IXQ5 586 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 LILRA2Q8N149 483 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 RASGEF1CQ8N431 466 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 MINDY1Q8N5J2 469 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 PRELID2Q8N945 189 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 DNAAF3Q8N9W5 541 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 POC5Q8NA72 575 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 PLA2G15Q8NCC3 412 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 SLC35B2Q8TB61 432 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 IFI44Q8TCB0 444 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 AGR3Q8TD06 166 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 ACTRT1Q8TDG2 376 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 SETD7Q8WTS6 366 aaKnown RBP2.69□□□□□ -1.98
SKP1-204ENST00000517691 FAM131CQ96AQ9 280 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 VOPP1Q96AW1 172 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 NUS1Q96E22 293 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 ELP4Q96EB1 424 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 CFAP36Q96G28 342 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 CMTM3Q96MX0 182 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 PPP1R2P1Q96PQ5 205 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 TBL1YQ9BQ87 522 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 RIOK2Q9BVS4 552 aaKnown RBP2.69□□□□□ -1.98
SKP1-204ENST00000517691 SPATA16Q9BXB7 569 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 PITHD1Q9GZP4 211 aaPredicted RBP2.69□□□□□ -1.98
SKP1-204ENST00000517691 FAM83DQ9H4H8 585 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 LRRC40Q9H9A6 602 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 BPIFA1Q9NP55 256 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 SEMA4BQ9NPR2 832 aaPredicted RBP2.69□□□□□ -1.98
SKP1-204ENST00000517691 SLAMF7Q9NQ25 335 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 TMEM9BQ9NQ34 198 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 GDF3Q9NR23 364 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 SLC35D1Q9NTN3 355 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 PKD2L2Q9NZM6 624 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 PAK5Q9P286 719 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 TTC7AQ9ULT0 858 aaPredicted RBP2.69□□□□□ -1.98
SKP1-204ENST00000517691 RPL26L1Q9UNX3 145 aaKnown RBP2.69□□□□□ -1.98
SKP1-204ENST00000517691 DRG1Q9Y295 367 aaKnown RBP2.69□□□□□ -1.98
SKP1-204ENST00000517691 RPH3AQ9Y2J0 694 aaPredicted RBP2.69□□□□□ -1.98
SKP1-204ENST00000517691 PPIL1Q9Y3C6 166 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 OR1A2Q9Y585 309 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 HS3ST3A1Q9Y663 406 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 KCNE2Q9Y6J6 123 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 CLCA3PQ9Y6N3 262 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 KIAA1549LQ6ZVL6 1849 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 KMT2EQ8IZD2 1858 aa2.68□□□□□ -1.98
SKP1-204ENST00000517691 CACNA1HO95180 2353 aa2.68□□□□□ -1.98
SKP1-204ENST00000517691 USP34Q70CQ2 3546 aa2.68□□□□□ -1.98
SKP1-204ENST00000517691 A0A0A6YYJ9 748 aa2.68□□□□□ -1.98
SKP1-204ENST00000517691 RNF103-CHMP3A0A140T963 221 aa2.68□□□□□ -1.98
SKP1-204ENST00000517691 FAM237BA0A1B0GVD1 139 aa2.68□□□□□ -1.98
SKP1-204ENST00000517691 LOC285095A0A1B0GVY8 99 aa2.68□□□□□ -1.98
SKP1-204ENST00000517691 A0A1W2PR77 199 aa2.68□□□□□ -1.98
SKP1-204ENST00000517691 ZNF839A8K0R7 811 aa2.68□□□□□ -1.98
SKP1-204ENST00000517691 FOXO6A8MYZ6 492 aa2.68□□□□□ -1.98
SKP1-204ENST00000517691 MYO1GB0I1T2 1018 aa2.68□□□□□ -1.98
SKP1-204ENST00000517691 K7ESM1 405 aa2.68□□□□□ -1.98
SKP1-204ENST00000517691 F2RL2O00254 374 aa2.68□□□□□ -1.98
SKP1-204ENST00000517691 PEX12O00623 359 aa2.68□□□□□ -1.98
SKP1-204ENST00000517691 CES2O00748 559 aa2.68□□□□□ -1.98
SKP1-204ENST00000517691 INPP4BO15327 924 aa2.68□□□□□ -1.98
SKP1-204ENST00000517691 STX7O15400 261 aaKnown RBP2.68□□□□□ -1.98
SKP1-204ENST00000517691 MAGEB3O15480 346 aa2.68□□□□□ -1.98
SKP1-204ENST00000517691 DFNA5O60443 496 aa2.68□□□□□ -1.98
SKP1-204ENST00000517691 SDC3O75056 442 aa2.68□□□□□ -1.98
SKP1-204ENST00000517691 AP2A1O95782 977 aa2.68□□□□□ -1.98
SKP1-204ENST00000517691 EPOP01588 193 aa2.68□□□□□ -1.98
SKP1-204ENST00000517691 KRT14P02533 472 aa2.68□□□□□ -1.98
SKP1-204ENST00000517691 WNT1P04628 370 aa2.68□□□□□ -1.98
SKP1-204ENST00000517691 FGF1P05230 155 aa2.68□□□□□ -1.98
SKP1-204ENST00000517691 APRTP07741 180 aa2.68□□□□□ -1.98
SKP1-204ENST00000517691 RNASE1P07998 156 aaKnown RBP2.68□□□□□ -1.98
SKP1-204ENST00000517691 ANXA6P08133 673 aa2.68□□□□□ -1.98
SKP1-204ENST00000517691 ATXN1LP0C7T5 689 aaKnown RBP2.68□□□□□ -1.98
SKP1-204ENST00000517691 ZNF30P17039 623 aa2.68□□□□□ -1.98
SKP1-204ENST00000517691 MCM3P25205 808 aa2.68□□□□□ -1.98
SKP1-204ENST00000517691 FDFT1P37268 417 aa2.68□□□□□ -1.98
SKP1-204ENST00000517691 COILP38432 576 aaPredicted RBP2.68□□□□□ -1.98
SKP1-204ENST00000517691 ADCY8P40145 1251 aa2.68□□□□□ -1.98
SKP1-204ENST00000517691 GPR1P46091 355 aa2.68□□□□□ -1.98
SKP1-204ENST00000517691 CCR10P46092 362 aa2.68□□□□□ -1.98
SKP1-204ENST00000517691 ARRB1P49407 418 aaPredicted RBP2.68□□□□□ -1.98
SKP1-204ENST00000517691 STC1P52823 247 aa2.68□□□□□ -1.98
SKP1-204ENST00000517691 CASP9P55211 416 aa2.68□□□□□ -1.98
SKP1-204ENST00000517691 NXPH1P58417 271 aa2.68□□□□□ -1.98
SKP1-204ENST00000517691 YBX1P67809 324 aaKnown RBP2.68□□□□□ -1.98
SKP1-204ENST00000517691 BNC1Q01954 994 aa2.68□□□□□ -1.98
SKP1-204ENST00000517691 RUNX1T1Q06455 604 aa2.68□□□□□ -1.98
SKP1-204ENST00000517691 OVGP1Q12889 678 aa2.68□□□□□ -1.98
SKP1-204ENST00000517691 TMEM115Q12893 351 aaPredicted RBP2.68□□□□□ -1.98
SKP1-204ENST00000517691 NPRL3Q12980 569 aa2.68□□□□□ -1.98
SKP1-204ENST00000517691 GPS1Q13098 491 aa2.68□□□□□ -1.98
SKP1-204ENST00000517691 PTK6Q13882 451 aa2.68□□□□□ -1.98
SKP1-204ENST00000517691 KCNAB1Q14722 419 aa2.68□□□□□ -1.98
SKP1-204ENST00000517691 POU6F1Q14863 301 aa2.68□□□□□ -1.98
SKP1-204ENST00000517691 SIX1Q15475 284 aaPredicted RBP2.68□□□□□ -1.98
SKP1-204ENST00000517691 HS1BP3Q53T59 392 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms