RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 TMEM52Q8NDY8 209 aa7.78□□□□□ -1.16
SCARNA20.3-201ENST00000516913 NFAM1Q8NET5 270 aaPredicted RBP7.78□□□□□ -1.16
SCARNA20.3-201ENST00000516913 ZCCHC10Q8TBK6 192 aa7.78□□□□□ -1.16
SCARNA20.3-201ENST00000516913 EEF1AKMT1Q8WVE0 214 aa7.78□□□□□ -1.16
SCARNA20.3-201ENST00000516913 NRGNQ92686 78 aa7.78□□□□□ -1.16
SCARNA20.3-201ENST00000516913 MVB12AQ96EY5 273 aa7.78□□□□□ -1.16
SCARNA20.3-201ENST00000516913 GPR137Q96N19 417 aa7.78□□□□□ -1.16
SCARNA20.3-201ENST00000516913 PWWP2AQ96N64 755 aa7.78□□□□□ -1.16
SCARNA20.3-201ENST00000516913 PANX3Q96QZ0 392 aa7.78□□□□□ -1.16
SCARNA20.3-201ENST00000516913 NDNQ99608 321 aa7.78□□□□□ -1.16
SCARNA20.3-201ENST00000516913 TUBB6Q9BUF5 446 aa7.78□□□□□ -1.16
SCARNA20.3-201ENST00000516913 SGPP1Q9BX95 441 aa7.78□□□□□ -1.16
SCARNA20.3-201ENST00000516913 RAB11FIP5Q9BXF6 653 aa7.78□□□□□ -1.16
SCARNA20.3-201ENST00000516913 ATG10Q9H0Y0 220 aa7.78□□□□□ -1.16
SCARNA20.3-201ENST00000516913 KLHL31Q9H511 634 aa7.78□□□□□ -1.16
SCARNA20.3-201ENST00000516913 NPDC1Q9NQX5 325 aaPredicted RBP7.78□□□□□ -1.16
SCARNA20.3-201ENST00000516913 RIC8BQ9NVN3 520 aa7.78□□□□□ -1.16
SCARNA20.3-201ENST00000516913 BFARQ9NZS9 450 aa7.78□□□□□ -1.16
SCARNA20.3-201ENST00000516913 FAM169AQ9Y6X4 670 aa7.78□□□□□ -1.16
SCARNA20.3-201ENST00000516913 JMJD1CQ15652 2540 aa7.78□□□□□ -1.16
SCARNA20.3-201ENST00000516913 A0A0G2JMM0 328 aa7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 A0A1W2PPB8 328 aa7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 A0A1W2PRS3 328 aa7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 DYTNA2CJ06 578 aa7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 PINLYPA6NC86 204 aa7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 KIR3DP1A8MWS1 328 aa7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 NPIPA5E9PKD4 350 aa7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 KLHL41O60662 606 aa7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 ZNF354AO60765 605 aaPredicted RBP7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 PRAMEF4O60810 478 aa7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 RASAL1O95294 804 aa7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 NSA2O95478 260 aaKnown RBP7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 CDH1P12830 882 aa7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 EZRP15311 586 aaKnown RBP7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 OGNP20774 298 aaKnown RBP7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 PPP2R1BP30154 601 aa7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 PTGER1P34995 402 aa7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 HNRNPFP52597 415 aaKnown RBP7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 TBPL1P62380 186 aa7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 TFF3Q07654 80 aa7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 USP10Q14694 798 aaKnown RBP7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 OR1C1Q15619 314 aa7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 BTBD16Q32M84 506 aa7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 C18orf21Q32NC0 220 aaPredicted RBP7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 SFT2D3Q587I9 215 aa7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 CATSPEREQ5SY80 951 aa7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 PRAMEF9Q5VWM5 478 aa7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 GALNTL5Q7Z4T8 443 aa7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 SPPL2CQ8IUH8 684 aa7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 SYCE1Q8N0S2 351 aa7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 CCDC89Q8N998 374 aa7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 ANKRD53Q8N9V6 530 aa7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 PLPP5Q8NEB5 264 aa7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 OR4K1Q8NGD4 311 aa7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 DNAJB8Q8NHS0 232 aa7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 ELP5Q8TE02 316 aa7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 COG1Q8WTW3 980 aa7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 PYCR2Q96C36 320 aa7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 PEX11GQ96HA9 241 aa7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 SERPINB12Q96P63 405 aa7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 TCF12Q99081 682 aa7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 AARSD1Q9BTE6 412 aaKnown RBP7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 FRMD8P1Q9BZ68 369 aaPredicted RBP7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 DEPPQ9NTK1 212 aa7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 C14orf105Q9NVL8 296 aa7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 ANAPC5Q9UJX4 755 aa7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 NPIPA1Q9UND3 350 aa7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 MEMO1Q9Y316 297 aa7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 NAALAD2Q9Y3Q0 740 aa7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 NSD1Q96L73 2696 aaPredicted RBP7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 ABCA4P78363 2273 aa7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 INTS1Q8N201 2190 aaKnown RBP7.77□□□□□ -1.17
SCARNA20.3-201ENST00000516913 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.76□□□□□ -1.17
SCARNA20.3-201ENST00000516913 IGKV3D-11A0A0A0MRZ8 115 aa7.76□□□□□ -1.17
SCARNA20.3-201ENST00000516913 FAM237BA0A1B0GVD1 139 aa7.76□□□□□ -1.17
SCARNA20.3-201ENST00000516913 GABRR3A8MPY1 467 aa7.76□□□□□ -1.17
SCARNA20.3-201ENST00000516913 H0YIG0 161 aa7.76□□□□□ -1.17
SCARNA20.3-201ENST00000516913 KPNA5O15131 536 aa7.76□□□□□ -1.17
SCARNA20.3-201ENST00000516913 TP73O15350 636 aa7.76□□□□□ -1.17
SCARNA20.3-201ENST00000516913 CHST10O43529 356 aa7.76□□□□□ -1.17
SCARNA20.3-201ENST00000516913 ASNA1O43681 348 aa7.76□□□□□ -1.17
SCARNA20.3-201ENST00000516913 KDM1AO60341 852 aa7.76□□□□□ -1.17
SCARNA20.3-201ENST00000516913 SYF2O95926 243 aaKnown RBP7.76□□□□□ -1.17
SCARNA20.3-201ENST00000516913 PTMAP06454 111 aaKnown RBP7.76□□□□□ -1.17
SCARNA20.3-201ENST00000516913 MPC1LP0DKB6 136 aa7.76□□□□□ -1.17
SCARNA20.3-201ENST00000516913 SMIM10L1P0DMW3 83 aa7.76□□□□□ -1.17
SCARNA20.3-201ENST00000516913 ERVK-10P10266 1014 aa7.76□□□□□ -1.17
SCARNA20.3-201ENST00000516913 IGFBP2P18065 325 aa7.76□□□□□ -1.17
SCARNA20.3-201ENST00000516913 FDXRP22570 491 aa7.76□□□□□ -1.17
SCARNA20.3-201ENST00000516913 CXCR2P25025 360 aa7.76□□□□□ -1.17
SCARNA20.3-201ENST00000516913 GPR143P51810 404 aa7.76□□□□□ -1.17
SCARNA20.3-201ENST00000516913 PER3P56645 1201 aa7.76□□□□□ -1.17
SCARNA20.3-201ENST00000516913 SLC26A5P58743 744 aa7.76□□□□□ -1.17
SCARNA20.3-201ENST00000516913 ABATP80404 500 aa7.76□□□□□ -1.17
SCARNA20.3-201ENST00000516913 GPS1Q13098 491 aa7.76□□□□□ -1.17
SCARNA20.3-201ENST00000516913 NAE1Q13564 534 aa7.76□□□□□ -1.17
SCARNA20.3-201ENST00000516913 DHX34Q14147 1143 aaKnown RBP7.76□□□□□ -1.17
SCARNA20.3-201ENST00000516913 MINDY4Q4G0A6 757 aa7.76□□□□□ -1.17
SCARNA20.3-201ENST00000516913 HSP90AA5PQ58FG0 334 aa7.76□□□□□ -1.17
SCARNA20.3-201ENST00000516913 ABHD17BQ5VST6 288 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms