RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 CYC1P08574 325 aa19.08■□□□□ 0.64
SQSTM1-215ENST00000514093 HOXD4P09016 255 aaPredicted RBP19.08■□□□□ 0.64
SQSTM1-215ENST00000514093 DRD2P14416 443 aa19.08■□□□□ 0.64
SQSTM1-215ENST00000514093 MEOX1P50221 254 aa19.08■□□□□ 0.64
SQSTM1-215ENST00000514093 SLC26A5P58743 744 aa19.08■□□□□ 0.64
SQSTM1-215ENST00000514093 USP10Q14694 798 aaKnown RBP19.08■□□□□ 0.64
SQSTM1-215ENST00000514093 ABRAXAS2Q15018 415 aa19.08■□□□□ 0.64
SQSTM1-215ENST00000514093 TMEM211Q6ICI0 200 aa19.08■□□□□ 0.64
SQSTM1-215ENST00000514093 VN1R4Q7Z5H5 301 aa19.08■□□□□ 0.64
SQSTM1-215ENST00000514093 LRRC6Q86X45 466 aa19.08■□□□□ 0.64
SQSTM1-215ENST00000514093 CNGA4Q8IV77 575 aa19.08■□□□□ 0.64
SQSTM1-215ENST00000514093 OTUD6BQ8N6M0 293 aa19.08■□□□□ 0.64
SQSTM1-215ENST00000514093 CHDHQ8NE62 594 aaPredicted RBP19.08■□□□□ 0.64
SQSTM1-215ENST00000514093 ZNF480Q8WV37 535 aa19.08■□□□□ 0.64
SQSTM1-215ENST00000514093 RND1Q92730 232 aa19.08■□□□□ 0.64
SQSTM1-215ENST00000514093 LIME1Q9H400 295 aa19.08■□□□□ 0.64
SQSTM1-215ENST00000514093 KCNN3Q9UGI6 736 aa19.08■□□□□ 0.64
SQSTM1-215ENST00000514093 E7ENX8 843 aa19.07■□□□□ 0.64
SQSTM1-215ENST00000514093 SMAPO00193 183 aa19.07■□□□□ 0.64
SQSTM1-215ENST00000514093 HS6ST1O60243 411 aa19.07■□□□□ 0.64
SQSTM1-215ENST00000514093 RDH16O75452 317 aa19.07■□□□□ 0.64
SQSTM1-215ENST00000514093 PSIP1O75475 530 aaKnown RBP19.07■□□□□ 0.64
SQSTM1-215ENST00000514093 SLC16A8O95907 504 aa19.07■□□□□ 0.64
SQSTM1-215ENST00000514093 CYB561P49447 251 aa19.07■□□□□ 0.64
SQSTM1-215ENST00000514093 NR0B1P51843 470 aaKnown RBP19.07■□□□□ 0.64
SQSTM1-215ENST00000514093 ITGA8P53708 1063 aa19.07■□□□□ 0.64
SQSTM1-215ENST00000514093 CRADDP78560 199 aa19.07■□□□□ 0.64
SQSTM1-215ENST00000514093 RHAGQ02094 409 aa19.07■□□□□ 0.64
SQSTM1-215ENST00000514093 TAP2Q03519 686 aa19.07■□□□□ 0.64
SQSTM1-215ENST00000514093 RELAQ04206 551 aa19.07■□□□□ 0.64
SQSTM1-215ENST00000514093 GBX1Q14549 363 aa19.07■□□□□ 0.64
SQSTM1-215ENST00000514093 KCNJ11Q14654 390 aa19.07■□□□□ 0.64
SQSTM1-215ENST00000514093 ARHGAP19Q14CB8 494 aa19.07■□□□□ 0.64
SQSTM1-215ENST00000514093 KLHL38Q2WGJ6 581 aa19.07■□□□□ 0.64
SQSTM1-215ENST00000514093 THEMIS2Q5TEJ8 643 aa19.07■□□□□ 0.64
SQSTM1-215ENST00000514093 PDSS2Q86YH6 399 aa19.07■□□□□ 0.64
SQSTM1-215ENST00000514093 ATG4AQ8WYN0 398 aa19.07■□□□□ 0.64
SQSTM1-215ENST00000514093 PEX11GQ96HA9 241 aa19.07■□□□□ 0.64
SQSTM1-215ENST00000514093 GOLGA8KD6RF30 607 aa19.06■□□□□ 0.64
SQSTM1-215ENST00000514093 GOLGA8TH3BQL2 631 aa19.06■□□□□ 0.64
SQSTM1-215ENST00000514093 SYF2O95926 243 aaKnown RBP19.06■□□□□ 0.64
SQSTM1-215ENST00000514093 ETS1P14921 441 aa19.06■□□□□ 0.64
SQSTM1-215ENST00000514093 TFEBP19484 476 aa19.06■□□□□ 0.64
SQSTM1-215ENST00000514093 CHRM3P20309 590 aa19.06■□□□□ 0.64
SQSTM1-215ENST00000514093 NMBRP28336 390 aa19.06■□□□□ 0.64
SQSTM1-215ENST00000514093 SESN2P58004 480 aaPredicted RBP19.06■□□□□ 0.64
SQSTM1-215ENST00000514093 OR4D2P58180 307 aa19.06■□□□□ 0.64
SQSTM1-215ENST00000514093 ABATP80404 500 aa19.06■□□□□ 0.64
SQSTM1-215ENST00000514093 PMPCAQ10713 525 aa19.06■□□□□ 0.64
SQSTM1-215ENST00000514093 FOXD4Q12950 439 aaPredicted RBP19.06■□□□□ 0.64
SQSTM1-215ENST00000514093 KLF1Q13351 362 aaPredicted RBP19.06■□□□□ 0.64
SQSTM1-215ENST00000514093 SPA17Q15506 151 aa19.06■□□□□ 0.64
SQSTM1-215ENST00000514093 CEBPEQ15744 281 aa19.06■□□□□ 0.64
SQSTM1-215ENST00000514093 TMEM214Q6NUQ4 689 aaKnown RBP19.06■□□□□ 0.64
SQSTM1-215ENST00000514093 SULF2Q8IWU5 870 aa19.06■□□□□ 0.64
SQSTM1-215ENST00000514093 KCT2Q8NC54 265 aa19.06■□□□□ 0.64
SQSTM1-215ENST00000514093 PLPP5Q8NEB5 264 aa19.06■□□□□ 0.64
SQSTM1-215ENST00000514093 ELP5Q8TE02 316 aa19.06■□□□□ 0.64
SQSTM1-215ENST00000514093 PEX13Q92968 403 aa19.06■□□□□ 0.64
SQSTM1-215ENST00000514093 FAM114A2Q9NRY5 505 aa19.06■□□□□ 0.64
SQSTM1-215ENST00000514093 DNAJB12Q9NXW2 375 aaKnown RBP19.06■□□□□ 0.64
SQSTM1-215ENST00000514093 ZNF860A6NHJ4 632 aa19.05■□□□□ 0.64
SQSTM1-215ENST00000514093 USP27XA6NNY8 438 aa19.05■□□□□ 0.64
SQSTM1-215ENST00000514093 FAM155BO75949 473 aa19.05■□□□□ 0.64
SQSTM1-215ENST00000514093 IFNB1P01574 187 aa19.05■□□□□ 0.64
SQSTM1-215ENST00000514093 FDFT1P37268 417 aa19.05■□□□□ 0.64
SQSTM1-215ENST00000514093 NUP107P57740 925 aa19.05■□□□□ 0.64
SQSTM1-215ENST00000514093 FOLH1Q04609 750 aa19.05■□□□□ 0.64
SQSTM1-215ENST00000514093 CMPK2Q5EBM0 449 aa19.05■□□□□ 0.64
SQSTM1-215ENST00000514093 PCID2Q5JVF3 399 aa19.05■□□□□ 0.64
SQSTM1-215ENST00000514093 LGI4Q8N135 537 aa19.05■□□□□ 0.64
SQSTM1-215ENST00000514093 OR5T3Q8NGG3 340 aa19.05■□□□□ 0.64
SQSTM1-215ENST00000514093 TMEM125Q96AQ2 219 aa19.05■□□□□ 0.64
SQSTM1-215ENST00000514093 SEC16BQ96JE7 1060 aa19.05■□□□□ 0.64
SQSTM1-215ENST00000514093 EBNA1BP2Q99848 306 aaKnown RBP19.05■□□□□ 0.64
SQSTM1-215ENST00000514093 TP63Q9H3D4 680 aaPredicted RBP19.05■□□□□ 0.64
SQSTM1-215ENST00000514093 ANKHQ9HCJ1 492 aa19.05■□□□□ 0.64
SQSTM1-215ENST00000514093 RAB6BQ9NRW1 208 aa19.05■□□□□ 0.64
SQSTM1-215ENST00000514093 LANCL2Q9NS86 450 aa19.05■□□□□ 0.64
SQSTM1-215ENST00000514093 TREX1Q9NSU2 369 aa19.05■□□□□ 0.64
SQSTM1-215ENST00000514093 PACSIN2Q9UNF0 486 aaPredicted RBP19.05■□□□□ 0.64
SQSTM1-215ENST00000514093 CRYL1Q9Y2S2 319 aa19.05■□□□□ 0.64
SQSTM1-215ENST00000514093 ZNF839A8K0R7 811 aa19.04■□□□□ 0.64
SQSTM1-215ENST00000514093 PRMT3O60678 531 aa19.04■□□□□ 0.64
SQSTM1-215ENST00000514093 CATP04040 527 aaKnown RBP19.04■□□□□ 0.64
SQSTM1-215ENST00000514093 ATP5DP30049 168 aa19.04■□□□□ 0.64
SQSTM1-215ENST00000514093 HSD17B2P37059 387 aa19.04■□□□□ 0.64
SQSTM1-215ENST00000514093 ANP32AP39687 249 aaKnown RBP19.04■□□□□ 0.64
SQSTM1-215ENST00000514093 EMC4Q5J8M3 183 aa19.04■□□□□ 0.64
SQSTM1-215ENST00000514093 CES3Q6UWW8 571 aa19.04■□□□□ 0.64
SQSTM1-215ENST00000514093 LRRC56Q8IYG6 542 aaPredicted RBP19.04■□□□□ 0.64
SQSTM1-215ENST00000514093 CYP4X1Q8N118 509 aa19.04■□□□□ 0.64
SQSTM1-215ENST00000514093 MPP5Q8N3R9 675 aa19.04■□□□□ 0.64
SQSTM1-215ENST00000514093 OR52N2Q8NGI0 321 aa19.04■□□□□ 0.64
SQSTM1-215ENST00000514093 LPGAT1Q92604 370 aa19.04■□□□□ 0.64
SQSTM1-215ENST00000514093 NAALAD2Q9Y3Q0 740 aa19.04■□□□□ 0.64
SQSTM1-215ENST00000514093 AKAP6Q13023 2319 aa19.03■□□□□ 0.64
SQSTM1-215ENST00000514093 ABCA4P78363 2273 aa19.03■□□□□ 0.64
SQSTM1-215ENST00000514093 FEZF1A0PJY2 475 aa19.03■□□□□ 0.64
SQSTM1-215ENST00000514093 MAGEB17A8MXT2 336 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms