RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 FAM220BPB1ANY3 271 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 RNASET2O00584 256 aaKnown RBP8.03□□□□□ -1.12
RNF4-220ENST00000513578 PCDH7O60245 1069 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 DFNA5O60443 496 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 CLEC3AO75596 197 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 KLHL18O94889 574 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 SCELO95171 688 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 FKBP9O95302 570 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 TBX6O95947 436 aaPredicted RBP8.03□□□□□ -1.12
RNF4-220ENST00000513578 ABCB1P08183 1280 aaPredicted RBP8.03□□□□□ -1.12
RNF4-220ENST00000513578 FCGR1AP12314 374 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 DDX5P17844 614 aaKnown RBP8.03□□□□□ -1.12
RNF4-220ENST00000513578 IL1RNP18510 177 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 GGT1P19440 569 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 IL10P22301 178 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 PPIBP23284 216 aaKnown RBP8.03□□□□□ -1.12
RNF4-220ENST00000513578 CD6P30203 668 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 HPCAL1P37235 193 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 CLDN2P57739 230 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 SRP54P61011 504 aaKnown RBP8.03□□□□□ -1.12
RNF4-220ENST00000513578 TRA2BP62995 288 aaKnown RBP8.03□□□□□ -1.12
RNF4-220ENST00000513578 CSNK1G2P78368 415 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 RELAQ04206 551 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 ZNF763Q0D2J5 394 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 ABHD18Q0P651 414 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 DDX39BQ13838 428 aaKnown RBP8.03□□□□□ -1.12
RNF4-220ENST00000513578 ZIC1Q15915 447 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 ALG11Q2TAA5 492 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 TPRG1LQ5T0D9 272 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 KHDRBS2Q5VWX1 349 aaKnown RBP8.03□□□□□ -1.12
RNF4-220ENST00000513578 FAM71E1Q6IPT2 247 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 ADNP2Q6IQ32 1131 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 PTCRAQ6ISU1 281 aaPredicted RBP8.03□□□□□ -1.12
RNF4-220ENST00000513578 DUS1LQ6P1R4 473 aaKnown RBP8.03□□□□□ -1.12
RNF4-220ENST00000513578 GPR155Q7Z3F1 870 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 COMMD6Q7Z4G1 85 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 SERPINA11Q86U17 422 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 SLC9B2Q86UD5 537 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 PDSS2Q86YH6 399 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 GJD3Q8N144 294 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 LILRA2Q8N149 483 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 RNF175Q8N4F7 328 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 TRPV3Q8NET8 790 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 VPS37AQ8NEZ2 397 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 GOT1L1Q8NHS2 421 aaPredicted RBP8.03□□□□□ -1.12
RNF4-220ENST00000513578 GPBAR1Q8TDU6 330 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 NUDT8Q8WV74 236 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 HMGB4Q8WW32 186 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 SH3KBP1Q96B97 665 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 PDXPQ96GD0 296 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 PPM1MQ96MI6 270 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 QRFPRQ96P65 431 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 GBP5Q96PP8 586 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 BTBD9Q96Q07 612 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 ECSITQ9BQ95 431 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 DUSP26Q9BV47 211 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 SPATA9Q9BWV2 254 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 REXO4Q9GZR2 422 aaKnown RBP8.03□□□□□ -1.12
RNF4-220ENST00000513578 OSGEPL1Q9H4B0 414 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 REEP4Q9H6H4 257 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 KAT8Q9H7Z6 458 aaKnown RBP8.03□□□□□ -1.12
RNF4-220ENST00000513578 LMAN1LQ9HAT1 526 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 CD93Q9NPY3 652 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 PRDM8Q9NQV8 689 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 C8orf4Q9NR00 106 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 IMP3Q9NV31 184 aaKnown RBP8.03□□□□□ -1.12
RNF4-220ENST00000513578 ATAD3AQ9NVI7 634 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 KLF15Q9UIH9 416 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 MOSPD1Q9UJG1 213 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 NDRG2Q9UN36 371 aaKnown RBP8.03□□□□□ -1.12
RNF4-220ENST00000513578 ICKQ9UPZ9 632 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 LRCH1Q9Y2L9 728 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 PCDHB14Q9Y5E9 798 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 A0A1W2PPC4 97 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 DHRS12A0PJE2 317 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 GABRR3A8MPY1 467 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 RFXANKO14593 260 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 RASGRP1O95267 797 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 TGFB1P01137 390 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 TNFP01375 233 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 RETP07949 1114 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 ANXA6P08133 673 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 FURINP09958 794 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 PIM1P11309 404 aaPredicted RBP8.02□□□□□ -1.13
RNF4-220ENST00000513578 BMP2P12643 396 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 F3P13726 295 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 COX7A2P14406 83 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 GPX2P18283 190 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 CD72P21854 359 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 PSMA4P25789 261 aaKnown RBP8.02□□□□□ -1.13
RNF4-220ENST00000513578 CMPK1P30085 196 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 AHRP35869 848 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 GRIA3P42263 894 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 CLCN2P51788 898 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 POLE2P56282 527 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 OR4D2P58180 307 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 MTPNP58546 118 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 TSTA3Q13630 321 aaPredicted RBP8.02□□□□□ -1.13
RNF4-220ENST00000513578 SELPLGQ14242 412 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 KRT33BQ14525 404 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms