RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 EPB41L4BQ9H329 900 aa6.18□□□□□ -1.42
KDM3B-208ENST00000512928 ANKHQ9HCJ1 492 aa6.18□□□□□ -1.42
KDM3B-208ENST00000512928 MKKSQ9NPJ1 570 aaPredicted RBP6.18□□□□□ -1.42
KDM3B-208ENST00000512928 RRAGDQ9NQL2 400 aaPredicted RBP6.18□□□□□ -1.42
KDM3B-208ENST00000512928 SMYD2Q9NRG4 433 aa6.18□□□□□ -1.42
KDM3B-208ENST00000512928 C14orf105Q9NVL8 296 aa6.18□□□□□ -1.42
KDM3B-208ENST00000512928 WWOXQ9NZC7 414 aa6.18□□□□□ -1.42
KDM3B-208ENST00000512928 RAB21Q9UL25 225 aa6.18□□□□□ -1.42
KDM3B-208ENST00000512928 MKL2Q9ULH7 1088 aa6.18□□□□□ -1.42
KDM3B-208ENST00000512928 MTO1Q9Y2Z2 717 aaKnown RBP6.18□□□□□ -1.42
KDM3B-208ENST00000512928 MRPS2Q9Y399 296 aaKnown RBP6.18□□□□□ -1.42
KDM3B-208ENST00000512928 HS3ST3B1Q9Y662 390 aa6.18□□□□□ -1.42
KDM3B-208ENST00000512928 TNRC6AQ8NDV7 1962 aaKnown RBP6.17□□□□□ -1.42
KDM3B-208ENST00000512928 KCNE1BA0A087WTH5 132 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 NSG1A0A0A6YYJ2 146 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 VSTM2BA6NLU5 285 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 CLGNO14967 610 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 CTIFO43310 598 aaKnown RBP6.17□□□□□ -1.42
KDM3B-208ENST00000512928 FOXS1O43638 330 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 LCMT2O60294 686 aaKnown RBP6.17□□□□□ -1.42
KDM3B-208ENST00000512928 VPS4BO75351 444 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 RDH16O75452 317 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 CDC123O75794 336 aaPredicted RBP6.17□□□□□ -1.42
KDM3B-208ENST00000512928 CEACAM4O75871 244 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 FAM155BO75949 473 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 IPO13O94829 963 aaKnown RBP6.17□□□□□ -1.42
KDM3B-208ENST00000512928 WISP3O95389 354 aaPredicted RBP6.17□□□□□ -1.42
KDM3B-208ENST00000512928 SLU7O95391 586 aaKnown RBP6.17□□□□□ -1.42
KDM3B-208ENST00000512928 GSTA2P09210 222 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 CCDC166P0CW27 439 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 SPRP35270 261 aaPredicted RBP6.17□□□□□ -1.42
KDM3B-208ENST00000512928 GP5P40197 560 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 SLC26A3P40879 764 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 GDF5P43026 501 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 XCR1P46094 333 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 CD97P48960 835 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 EMP3P54852 163 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 GPX6P59796 221 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 POU4F1Q01851 419 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 RGS1Q08116 209 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 EFTUD2Q15029 972 aaKnown RBP eCLIP6.17□□□□□ -1.429e-9■■□□□ 14.5
KDM3B-208ENST00000512928 PPP1R3AQ16821 1122 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 C18orf21Q32NC0 220 aaPredicted RBP6.17□□□□□ -1.42
KDM3B-208ENST00000512928 KBTBD12Q3ZCT8 623 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 PRR30Q53SZ7 412 aaPredicted RBP6.17□□□□□ -1.42
KDM3B-208ENST00000512928 FBXO48Q5FWF7 155 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 AGAP7PQ5VUJ5 663 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 SLC6A19Q695T7 634 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 JMJD6Q6NYC1 403 aaPredicted RBP6.17□□□□□ -1.42
KDM3B-208ENST00000512928 LINC00696Q6ZRV3 163 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 PRSS41Q7RTY9 318 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 VN1R4Q7Z5H5 301 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 LAPTM4BQ86VI4 370 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 GPSM1Q86YR5 675 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 ZC3H7AQ8IWR0 971 aaKnown RBP6.17□□□□□ -1.42
KDM3B-208ENST00000512928 ZADH2Q8N4Q0 377 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 AMER3Q8N944 861 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 SNX31Q8N9S9 440 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 MFSD9Q8NBP5 474 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 KCT2Q8NC54 265 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 OR11G2Q8NGC1 345 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 OR56A3Q8NH54 315 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 OR51Q1Q8NH59 317 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 FBF1Q8TES7 1133 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 METTL21AQ8WXB1 218 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 IFT81Q8WYA0 676 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 CCT6BQ92526 530 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 NEIL2Q969S2 332 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 NACC2Q96BF6 587 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 THAP11Q96EK4 314 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 PDLIM5Q96HC4 596 aaKnown RBP6.17□□□□□ -1.42
KDM3B-208ENST00000512928 AGAP4Q96P64 663 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 OR4K3Q96R72 315 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 SMAD5Q99717 465 aaKnown RBP6.17□□□□□ -1.42
KDM3B-208ENST00000512928 POPDC3Q9HBV1 291 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 MLXIPLQ9NP71 852 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 CD274Q9NZQ7 290 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 RNF112Q9ULX5 631 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 VPS4AQ9UN37 437 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 NOVA2Q9UNW9 492 aaKnown RBP6.17□□□□□ -1.42
KDM3B-208ENST00000512928 SLC22A14Q9Y267 594 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 NAALAD2Q9Y3Q0 740 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 MAP4K5Q9Y4K4 846 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 OARD1Q9Y530 152 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 PCDHGB7Q9Y5F8 929 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 KCNE2Q9Y6J6 123 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 SPTBP11277 2137 aa6.17□□□□□ -1.42
KDM3B-208ENST00000512928 PTPN13Q12923 2485 aa6.16□□□□□ -1.42
KDM3B-208ENST00000512928 IGHV3-20A0A0C4DH32 117 aa6.16□□□□□ -1.42
KDM3B-208ENST00000512928 TRBC2A0A5B9 178 aa6.16□□□□□ -1.42
KDM3B-208ENST00000512928 FAM159BA6NKW6 160 aa6.16□□□□□ -1.42
KDM3B-208ENST00000512928 SUPT3HB4E1H0 165 aa6.16□□□□□ -1.42
KDM3B-208ENST00000512928 H0YIG0 161 aa6.16□□□□□ -1.42
KDM3B-208ENST00000512928 H2AFYO75367 372 aaKnown RBP6.16□□□□□ -1.42
KDM3B-208ENST00000512928 SUPT3HO75486 399 aa6.16□□□□□ -1.42
KDM3B-208ENST00000512928 JRKO75564 520 aa6.16□□□□□ -1.42
KDM3B-208ENST00000512928 SEC24DO94855 1032 aaPredicted RBP6.16□□□□□ -1.42
KDM3B-208ENST00000512928 KLHL18O94889 574 aa6.16□□□□□ -1.42
KDM3B-208ENST00000512928 NSA2O95478 260 aaKnown RBP6.16□□□□□ -1.42
KDM3B-208ENST00000512928 ONECUT2O95948 504 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms