RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 GSDMBQ8TAX9 411 aa17.83■□□□□ 0.44
HMGCS1-206ENST00000511774 BIRC8Q96P09 236 aa17.83■□□□□ 0.44
HMGCS1-206ENST00000511774 ABCF3Q9NUQ8 709 aa17.83■□□□□ 0.44
HMGCS1-206ENST00000511774 TCAF1Q9Y4C2 921 aa17.83■□□□□ 0.44
HMGCS1-206ENST00000511774 GTF3C3Q9Y5Q9 886 aa17.83■□□□□ 0.44
HMGCS1-206ENST00000511774 STAB1Q9NY15 2570 aa17.82■□□□□ 0.44
HMGCS1-206ENST00000511774 PSMD3O43242 534 aa17.82■□□□□ 0.44
HMGCS1-206ENST00000511774 DNAJB6O75190 326 aa17.82■□□□□ 0.44
HMGCS1-206ENST00000511774 NIPSNAP2O75323 286 aa17.82■□□□□ 0.44
HMGCS1-206ENST00000511774 PDE9AO76083 593 aa17.82■□□□□ 0.44
HMGCS1-206ENST00000511774 PKMP14618 531 aaKnown RBP17.82■□□□□ 0.44
HMGCS1-206ENST00000511774 ADRA1DP25100 572 aa17.82■□□□□ 0.44
HMGCS1-206ENST00000511774 MAGEA1P43355 309 aa17.82■□□□□ 0.44
HMGCS1-206ENST00000511774 PNLIPRP1P54315 467 aa17.82■□□□□ 0.44
HMGCS1-206ENST00000511774 NDUFA9Q16795 377 aa17.82■□□□□ 0.44
HMGCS1-206ENST00000511774 P3H1Q32P28 736 aa17.82■□□□□ 0.44
HMGCS1-206ENST00000511774 ACSBG2Q5FVE4 666 aa17.82■□□□□ 0.44
HMGCS1-206ENST00000511774 ADCK2Q7Z695 626 aa17.82■□□□□ 0.44
HMGCS1-206ENST00000511774 LINC00523Q86TU6 105 aa17.82■□□□□ 0.44
HMGCS1-206ENST00000511774 LRRC56Q8IYG6 542 aaPredicted RBP17.82■□□□□ 0.44
HMGCS1-206ENST00000511774 ZNF480Q8WV37 535 aa17.82■□□□□ 0.44
HMGCS1-206ENST00000511774 FOPNLQ96NB1 174 aa17.82■□□□□ 0.44
HMGCS1-206ENST00000511774 PANX3Q96QZ0 392 aa17.82■□□□□ 0.44
HMGCS1-206ENST00000511774 LPAR4Q99677 370 aa17.82■□□□□ 0.44
HMGCS1-206ENST00000511774 MDFIQ99750 246 aa17.82■□□□□ 0.44
HMGCS1-206ENST00000511774 GPATCH1Q9BRR8 931 aaKnown RBP17.82■□□□□ 0.44
HMGCS1-206ENST00000511774 MRFAP1Q9Y605 127 aa17.82■□□□□ 0.44
HMGCS1-206ENST00000511774 MPDZO75970 2070 aa17.82■□□□□ 0.44
HMGCS1-206ENST00000511774 ZANQ9Y493 2812 aa17.82■□□□□ 0.44
HMGCS1-206ENST00000511774 EML6Q6ZMW3 1958 aa17.82■□□□□ 0.44
HMGCS1-206ENST00000511774 E7ENX8 843 aa17.81■□□□□ 0.44
HMGCS1-206ENST00000511774 H7BY64 318 aa17.81■□□□□ 0.44
HMGCS1-206ENST00000511774 TXNDC9O14530 226 aa17.81■□□□□ 0.44
HMGCS1-206ENST00000511774 CD3EAPO15446 510 aaKnown RBP17.81■□□□□ 0.44
HMGCS1-206ENST00000511774 PSIP1O75475 530 aaKnown RBP17.81■□□□□ 0.44
HMGCS1-206ENST00000511774 SLC16A8O95907 504 aa17.81■□□□□ 0.44
HMGCS1-206ENST00000511774 FOSL1P15407 271 aa17.81■□□□□ 0.44
HMGCS1-206ENST00000511774 RPS3P23396 243 aaKnown RBP eCLIP17.81■□□□□ 0.449e-13■■■■□ 20.9
HMGCS1-206ENST00000511774 EIF3BP55884 814 aaKnown RBP17.81■□□□□ 0.44
HMGCS1-206ENST00000511774 MLF1P58340 268 aa17.81■□□□□ 0.44
HMGCS1-206ENST00000511774 TAP2Q03519 686 aa17.81■□□□□ 0.44
HMGCS1-206ENST00000511774 ACTN3Q08043 901 aaPredicted RBP17.81■□□□□ 0.44
HMGCS1-206ENST00000511774 TRIM14Q14142 442 aa17.81■□□□□ 0.44
HMGCS1-206ENST00000511774 KCNJ11Q14654 390 aa17.81■□□□□ 0.44
HMGCS1-206ENST00000511774 NSDHLQ15738 373 aa17.81■□□□□ 0.44
HMGCS1-206ENST00000511774 ANKRD20A4Q4UJ75 823 aa17.81■□□□□ 0.44
HMGCS1-206ENST00000511774 TMEM214Q6NUQ4 689 aaKnown RBP17.81■□□□□ 0.44
HMGCS1-206ENST00000511774 PCGF5Q86SE9 256 aa17.81■□□□□ 0.44
HMGCS1-206ENST00000511774 LIX1LQ8IVB5 337 aa17.81■□□□□ 0.44
HMGCS1-206ENST00000511774 KCT2Q8NC54 265 aa17.81■□□□□ 0.44
HMGCS1-206ENST00000511774 PLPP5Q8NEB5 264 aa17.81■□□□□ 0.44
HMGCS1-206ENST00000511774 OR5T3Q8NGG3 340 aa17.81■□□□□ 0.44
HMGCS1-206ENST00000511774 C16orf52Q8NHV5 167 aa17.81■□□□□ 0.44
HMGCS1-206ENST00000511774 ZCCHC10Q8TBK6 192 aa17.81■□□□□ 0.44
HMGCS1-206ENST00000511774 MAGEC3Q8TD91 643 aa17.81■□□□□ 0.44
HMGCS1-206ENST00000511774 PRAP1Q96NZ9 151 aa17.81■□□□□ 0.44
HMGCS1-206ENST00000511774 POLDIP3Q9BY77 421 aaKnown RBP17.81■□□□□ 0.44
HMGCS1-206ENST00000511774 TP63Q9H3D4 680 aaPredicted RBP17.81■□□□□ 0.44
HMGCS1-206ENST00000511774 ETNK1Q9HBU6 452 aa17.81■□□□□ 0.44
HMGCS1-206ENST00000511774 CHRAC1Q9NRG0 131 aa17.81■□□□□ 0.44
HMGCS1-206ENST00000511774 FAM237BA0A1B0GVD1 139 aa17.8■□□□□ 0.44
HMGCS1-206ENST00000511774 TCRBV7S2A1N4TA0A589 114 aa17.8■□□□□ 0.44
HMGCS1-206ENST00000511774 SYCE3A1L190 88 aa17.8■□□□□ 0.44
HMGCS1-206ENST00000511774 ZNF860A6NHJ4 632 aa17.8■□□□□ 0.44
HMGCS1-206ENST00000511774 TJP3O95049 919 aa17.8■□□□□ 0.44
HMGCS1-206ENST00000511774 TRHRP34981 398 aaPredicted RBP17.8■□□□□ 0.44
HMGCS1-206ENST00000511774 PPARGP37231 505 aaPredicted RBP17.8■□□□□ 0.44
HMGCS1-206ENST00000511774 CYB561P49447 251 aa17.8■□□□□ 0.44
HMGCS1-206ENST00000511774 TTPAP49638 278 aa17.8■□□□□ 0.44
HMGCS1-206ENST00000511774 HLCSP50747 726 aa17.8■□□□□ 0.44
HMGCS1-206ENST00000511774 AARS2Q5JTZ9 985 aaKnown RBP17.8■□□□□ 0.44
HMGCS1-206ENST00000511774 PRUNE1Q86TP1 453 aa17.8■□□□□ 0.44
HMGCS1-206ENST00000511774 ZZZ3Q8IYH5 903 aa17.8■□□□□ 0.44
HMGCS1-206ENST00000511774 POGLUT1Q8NBL1 392 aa17.8■□□□□ 0.44
HMGCS1-206ENST00000511774 SLC35B2Q8TB61 432 aa17.8■□□□□ 0.44
HMGCS1-206ENST00000511774 PEX11GQ96HA9 241 aa17.8■□□□□ 0.44
HMGCS1-206ENST00000511774 PWWP2AQ96N64 755 aa17.8■□□□□ 0.44
HMGCS1-206ENST00000511774 SH2B3Q9UQQ2 575 aa17.8■□□□□ 0.44
HMGCS1-206ENST00000511774 FBN1P35555 2871 aaKnown RBP17.8■□□□□ 0.44
HMGCS1-206ENST00000511774 ATRQ13535 2644 aa17.8■□□□□ 0.44
HMGCS1-206ENST00000511774 GOLGA6L22H0YM25 854 aa17.79■□□□□ 0.44
HMGCS1-206ENST00000511774 SMAPO00193 183 aa17.79■□□□□ 0.44
HMGCS1-206ENST00000511774 KPNA5O15131 536 aa17.79■□□□□ 0.44
HMGCS1-206ENST00000511774 PEX1O43933 1283 aa17.79■□□□□ 0.44
HMGCS1-206ENST00000511774 ARNTP27540 789 aa17.79■□□□□ 0.44
HMGCS1-206ENST00000511774 OR4D2P58180 307 aa17.79■□□□□ 0.44
HMGCS1-206ENST00000511774 TAS2R50P59544 299 aa17.79■□□□□ 0.44
HMGCS1-206ENST00000511774 GPR85P60893 370 aa17.79■□□□□ 0.44
HMGCS1-206ENST00000511774 CRADDP78560 199 aa17.79■□□□□ 0.44
HMGCS1-206ENST00000511774 ARHGAP19Q14CB8 494 aa17.79■□□□□ 0.44
HMGCS1-206ENST00000511774 TYSND1Q2T9J0 566 aa17.79■□□□□ 0.44
HMGCS1-206ENST00000511774 MDGA2Q7Z553 956 aa17.79■□□□□ 0.44
HMGCS1-206ENST00000511774 PRIMA1Q86XR5 153 aa17.79■□□□□ 0.44
HMGCS1-206ENST00000511774 VSTM4Q8IW00 320 aa17.79■□□□□ 0.44
HMGCS1-206ENST00000511774 WFDC11Q8NEX6 87 aa17.79■□□□□ 0.44
HMGCS1-206ENST00000511774 SLC30A3Q99726 388 aa17.79■□□□□ 0.44
HMGCS1-206ENST00000511774 KIAA1324LA8MWY0 1029 aaPredicted RBP17.78■□□□□ 0.44
HMGCS1-206ENST00000511774 MAGEB17A8MXT2 336 aa17.78■□□□□ 0.44
HMGCS1-206ENST00000511774 GOLGA6L19H0YKK7 550 aa17.78■□□□□ 0.44
HMGCS1-206ENST00000511774 CCNDBP1O95273 360 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms