RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 ATP13A3Q9H7F0 1226 aa2.8□□□□□ -1.96
CHD1-207ENST00000511628 PKD2L2Q9NZM6 624 aa2.8□□□□□ -1.96
CHD1-207ENST00000511628 OR6C2Q9NZP2 312 aa2.8□□□□□ -1.96
CHD1-207ENST00000511628 VPS18Q9P253 973 aa2.8□□□□□ -1.96
CHD1-207ENST00000511628 CHKBQ9Y259 395 aa2.8□□□□□ -1.96
CHD1-207ENST00000511628 EXOGQ9Y2C4 368 aaKnown RBP2.8□□□□□ -1.96
CHD1-207ENST00000511628 LRRD1A4D1F6 860 aa2.79□□□□□ -1.96
CHD1-207ENST00000511628 SDR42E2A6NKP2 422 aa2.79□□□□□ -1.96
CHD1-207ENST00000511628 SLCO1B7G3V0H7 640 aa2.79□□□□□ -1.96
CHD1-207ENST00000511628 O00370 1275 aa2.79□□□□□ -1.96
CHD1-207ENST00000511628 GLCEO94923 617 aa2.79□□□□□ -1.96
CHD1-207ENST00000511628 MOCS2O96007 188 aaPredicted RBP2.79□□□□□ -1.96
CHD1-207ENST00000511628 ATP1B1P05026 303 aa2.79□□□□□ -1.96
CHD1-207ENST00000511628 HMOX1P09601 288 aa2.79□□□□□ -1.96
CHD1-207ENST00000511628 SP9P0CG40 484 aa2.79□□□□□ -1.96
CHD1-207ENST00000511628 FAM157CP0CG43 387 aa2.79□□□□□ -1.96
CHD1-207ENST00000511628 DPEP1P16444 411 aa2.79□□□□□ -1.96
CHD1-207ENST00000511628 PIK3R1P27986 724 aa2.79□□□□□ -1.96
CHD1-207ENST00000511628 KRTAP10-12P60413 245 aa2.79□□□□□ -1.96
CHD1-207ENST00000511628 SULT2A1Q06520 285 aa2.79□□□□□ -1.96
CHD1-207ENST00000511628 IL10RBQ08334 325 aa2.79□□□□□ -1.96
CHD1-207ENST00000511628 AP1B1Q10567 949 aa2.79□□□□□ -1.96
CHD1-207ENST00000511628 HNRNPDQ14103 355 aaKnown RBP2.79□□□□□ -1.96
CHD1-207ENST00000511628 SGSM1Q2NKQ1 1148 aa2.79□□□□□ -1.96
CHD1-207ENST00000511628 C20orf194Q5TEA3 1177 aa2.79□□□□□ -1.96
CHD1-207ENST00000511628 PRAMEF8Q5VWM4 474 aa2.79□□□□□ -1.96
CHD1-207ENST00000511628 PWWP2BQ6NUJ5 590 aa2.79□□□□□ -1.96
CHD1-207ENST00000511628 TTC27Q6P3X3 843 aa2.79□□□□□ -1.96
CHD1-207ENST00000511628 TRIM65Q6PJ69 517 aa2.79□□□□□ -1.96
CHD1-207ENST00000511628 NOTCH2NLQ7Z3S9 236 aa2.79□□□□□ -1.96
CHD1-207ENST00000511628 CPEB2Q7Z5Q1 589 aaKnown RBP2.79□□□□□ -1.96
CHD1-207ENST00000511628 KRTAP7-1Q8IUC3 87 aa2.79□□□□□ -1.96
CHD1-207ENST00000511628 CLYBLQ8N0X4 340 aa2.79□□□□□ -1.96
CHD1-207ENST00000511628 LYG1Q8N1E2 194 aa2.79□□□□□ -1.96
CHD1-207ENST00000511628 SPEM1Q8N4L4 309 aa2.79□□□□□ -1.96
CHD1-207ENST00000511628 RAB42Q8N4Z0 105 aa2.79□□□□□ -1.96
CHD1-207ENST00000511628 TMEM178AQ8NBL3 297 aa2.79□□□□□ -1.96
CHD1-207ENST00000511628 MSANTD4Q8NCY6 345 aa2.79□□□□□ -1.96
CHD1-207ENST00000511628 OR13C3Q8NGS6 347 aa2.79□□□□□ -1.96
CHD1-207ENST00000511628 MGARPQ8TDB4 240 aa2.79□□□□□ -1.96
CHD1-207ENST00000511628 RNASE8Q8TDE3 154 aaKnown RBP2.79□□□□□ -1.96
CHD1-207ENST00000511628 SNX21Q969T3 373 aa2.79□□□□□ -1.96
CHD1-207ENST00000511628 GMPPAQ96IJ6 420 aaPredicted RBP2.79□□□□□ -1.96
CHD1-207ENST00000511628 EPSTI1Q96J88 318 aa2.79□□□□□ -1.96
CHD1-207ENST00000511628 AK8Q96MA6 479 aa2.79□□□□□ -1.96
CHD1-207ENST00000511628 PANX3Q96QZ0 392 aa2.79□□□□□ -1.96
CHD1-207ENST00000511628 IWS1Q96ST2 819 aa2.79□□□□□ -1.96
CHD1-207ENST00000511628 SYT15Q9BQS2 421 aa2.79□□□□□ -1.96
CHD1-207ENST00000511628 ZNF559Q9BR84 538 aa2.79□□□□□ -1.96
CHD1-207ENST00000511628 ATG101Q9BSB4 218 aa2.79□□□□□ -1.96
CHD1-207ENST00000511628 SLC5A7Q9GZV3 580 aa2.79□□□□□ -1.96
CHD1-207ENST00000511628 SDCBP2Q9H190 292 aa2.79□□□□□ -1.96
CHD1-207ENST00000511628 P2RY12Q9H244 342 aa2.79□□□□□ -1.96
CHD1-207ENST00000511628 C5orf66Q9H5L9 145 aa2.79□□□□□ -1.96
CHD1-207ENST00000511628 IL1RAPL2Q9NP60 686 aa2.79□□□□□ -1.96
CHD1-207ENST00000511628 ZNF71Q9NQZ8 489 aaPredicted RBP2.79□□□□□ -1.96
CHD1-207ENST00000511628 MRPL17Q9NRX2 175 aaKnown RBP2.79□□□□□ -1.96
CHD1-207ENST00000511628 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.79□□□□□ -1.96
CHD1-207ENST00000511628 ATAD3AQ9NVI7 634 aa2.79□□□□□ -1.96
CHD1-207ENST00000511628 C2orf42Q9NWW7 574 aa2.79□□□□□ -1.96
CHD1-207ENST00000511628 KLHL8Q9P2G9 620 aaPredicted RBP2.79□□□□□ -1.96
CHD1-207ENST00000511628 LEF1Q9UJU2 399 aaPredicted RBP2.79□□□□□ -1.96
CHD1-207ENST00000511628 GMEB2Q9UKD1 530 aa2.79□□□□□ -1.96
CHD1-207ENST00000511628 PA2G4Q9UQ80 394 aaKnown RBP2.79□□□□□ -1.96
CHD1-207ENST00000511628 RUVBL2Q9Y230 463 aaKnown RBP2.79□□□□□ -1.96
CHD1-207ENST00000511628 SMAD5-AS1Q9Y6J3 95 aa2.79□□□□□ -1.96
CHD1-207ENST00000511628 IGHV4-4A0A075B6R2 117 aa2.78□□□□□ -1.96
CHD1-207ENST00000511628 A0A0B4J203 849 aa2.78□□□□□ -1.96
CHD1-207ENST00000511628 ILVBLA1L0T0 632 aa2.78□□□□□ -1.96
CHD1-207ENST00000511628 MEIOCA2RUB1 952 aa2.78□□□□□ -1.96
CHD1-207ENST00000511628 C5orf51A6NDU8 294 aa2.78□□□□□ -1.96
CHD1-207ENST00000511628 GLTPD2A6NH11 291 aa2.78□□□□□ -1.96
CHD1-207ENST00000511628 ANKDD1BA6NHY2 528 aa2.78□□□□□ -1.96
CHD1-207ENST00000511628 MSGN1A6NI15 193 aa2.78□□□□□ -1.96
CHD1-207ENST00000511628 TMEM150CB9EJG8 249 aa2.78□□□□□ -1.96
CHD1-207ENST00000511628 H7C423 109 aa2.78□□□□□ -1.96
CHD1-207ENST00000511628 AKAP3O75969 853 aa2.78□□□□□ -1.96
CHD1-207ENST00000511628 SORBS2O94875 1100 aaKnown RBP2.78□□□□□ -1.96
CHD1-207ENST00000511628 C9P02748 559 aa2.78□□□□□ -1.96
CHD1-207ENST00000511628 GOT1P17174 413 aa2.78□□□□□ -1.96
CHD1-207ENST00000511628 SP100P23497 879 aaPredicted RBP2.78□□□□□ -1.96
CHD1-207ENST00000511628 SLC6A12P48065 614 aa2.78□□□□□ -1.96
CHD1-207ENST00000511628 NPBWR1P48145 328 aa2.78□□□□□ -1.96
CHD1-207ENST00000511628 KHKP50053 298 aa2.78□□□□□ -1.96
CHD1-207ENST00000511628 DNA2P51530 1060 aa2.78□□□□□ -1.96
CHD1-207ENST00000511628 SNU13P55769 128 aaKnown RBP2.78□□□□□ -1.96
CHD1-207ENST00000511628 YBEYP58557 167 aaPredicted RBP2.78□□□□□ -1.96
CHD1-207ENST00000511628 STX1BP61266 288 aa2.78□□□□□ -1.96
CHD1-207ENST00000511628 SP3Q02447 781 aa2.78□□□□□ -1.96
CHD1-207ENST00000511628 MORF4L2Q15014 288 aa2.78□□□□□ -1.96
CHD1-207ENST00000511628 HFEQ30201 348 aa2.78□□□□□ -1.96
CHD1-207ENST00000511628 SPOUT1Q5T280 376 aaKnown RBP2.78□□□□□ -1.96
CHD1-207ENST00000511628 PM20D1Q6GTS8 502 aa2.78□□□□□ -1.96
CHD1-207ENST00000511628 KLHL10Q6JEL2 608 aa2.78□□□□□ -1.96
CHD1-207ENST00000511628 FAAP20Q6NZ36 180 aa2.78□□□□□ -1.96
CHD1-207ENST00000511628 BHLHB9Q6PI77 547 aa2.78□□□□□ -1.96
CHD1-207ENST00000511628 SIGLEC15Q6ZMC9 328 aa2.78□□□□□ -1.96
CHD1-207ENST00000511628 BTN2A1Q7KYR7 527 aa2.78□□□□□ -1.96
CHD1-207ENST00000511628 GPR141Q7Z602 305 aa2.78□□□□□ -1.96
CHD1-207ENST00000511628 ANKRD46Q86W74 232 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms