RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 FASNP49327 2511 aaKnown RBP12.87□□□□□ -0.35
SNF8-206ENST00000509989 A0A087WUV0 522 aaPredicted RBP12.87□□□□□ -0.35
SNF8-206ENST00000509989 TRBC2A0A5B9 178 aa12.87□□□□□ -0.35
SNF8-206ENST00000509989 PABPN1LA6NDY0 278 aaKnown RBP12.87□□□□□ -0.35
SNF8-206ENST00000509989 SUPT3HB4E1H0 165 aa12.87□□□□□ -0.35
SNF8-206ENST00000509989 TK2O00142 265 aa12.87□□□□□ -0.35
SNF8-206ENST00000509989 ZNF500O60304 480 aaPredicted RBP12.87□□□□□ -0.35
SNF8-206ENST00000509989 KERAO60938 352 aa12.87□□□□□ -0.35
SNF8-206ENST00000509989 RDH16O75452 317 aa12.87□□□□□ -0.35
SNF8-206ENST00000509989 SUPT3HO75486 399 aa12.87□□□□□ -0.35
SNF8-206ENST00000509989 SERPIND1P05546 499 aa12.87□□□□□ -0.35
SNF8-206ENST00000509989 SBK3P0C264 359 aa12.87□□□□□ -0.35
SNF8-206ENST00000509989 ZGLP1P0C6A0 271 aa12.87□□□□□ -0.35
SNF8-206ENST00000509989 FBLP22087 321 aaKnown RBP12.87□□□□□ -0.35
SNF8-206ENST00000509989 TYK2P29597 1187 aa12.87□□□□□ -0.35
SNF8-206ENST00000509989 GGT5P36269 586 aa12.87□□□□□ -0.35
SNF8-206ENST00000509989 SLC26A3P40879 764 aa12.87□□□□□ -0.35
SNF8-206ENST00000509989 HNF4AP41235 474 aa12.87□□□□□ -0.35
SNF8-206ENST00000509989 MSH2P43246 934 aa12.87□□□□□ -0.35
SNF8-206ENST00000509989 NAA25Q14CX7 972 aa12.87□□□□□ -0.35
SNF8-206ENST00000509989 FAAH2Q6GMR7 532 aa12.87□□□□□ -0.35
SNF8-206ENST00000509989 TBC1D1Q86TI0 1168 aaPredicted RBP12.87□□□□□ -0.35
SNF8-206ENST00000509989 ZC3H7AQ8IWR0 971 aaKnown RBP12.87□□□□□ -0.35
SNF8-206ENST00000509989 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.87□□□□□ -0.35
SNF8-206ENST00000509989 RNF175Q8N4F7 328 aa12.87□□□□□ -0.35
SNF8-206ENST00000509989 LSM14AQ8ND56 463 aaKnown RBP12.87□□□□□ -0.35
SNF8-206ENST00000509989 CREB3L4Q8TEY5 395 aa12.87□□□□□ -0.35
SNF8-206ENST00000509989 ISL2Q96A47 359 aa12.87□□□□□ -0.35
SNF8-206ENST00000509989 FKBP10Q96AY3 582 aa12.87□□□□□ -0.35
SNF8-206ENST00000509989 SARGQ9BW04 601 aa12.87□□□□□ -0.35
SNF8-206ENST00000509989 YIPF2Q9BWQ6 316 aa12.87□□□□□ -0.35
SNF8-206ENST00000509989 ING2Q9H160 280 aa12.87□□□□□ -0.35
SNF8-206ENST00000509989 SLC26A1Q9H2B4 701 aa12.87□□□□□ -0.35
SNF8-206ENST00000509989 PELI2Q9HAT8 420 aa12.87□□□□□ -0.35
SNF8-206ENST00000509989 NMRAL1Q9HBL8 299 aa12.87□□□□□ -0.35
SNF8-206ENST00000509989 P4HTMQ9NXG6 502 aa12.87□□□□□ -0.35
SNF8-206ENST00000509989 TRPC4Q9UBN4 977 aa12.87□□□□□ -0.35
SNF8-206ENST00000509989 ZNF490Q9ULM2 529 aaPredicted RBP12.87□□□□□ -0.35
SNF8-206ENST00000509989 IGLV3-12A0A075B6K2 115 aa12.86□□□□□ -0.35
SNF8-206ENST00000509989 A0A087X1B8 175 aa12.86□□□□□ -0.35
SNF8-206ENST00000509989 A0A0G2JN53 185 aa12.86□□□□□ -0.35
SNF8-206ENST00000509989 MAP2K7O14733 419 aa12.86□□□□□ -0.35
SNF8-206ENST00000509989 NDUFS4O43181 175 aa12.86□□□□□ -0.35
SNF8-206ENST00000509989 CCNT2O60583 730 aaKnown RBP12.86□□□□□ -0.35
SNF8-206ENST00000509989 RFPL1O75677 317 aa12.86□□□□□ -0.35
SNF8-206ENST00000509989 KLHL2O95198 593 aa12.86□□□□□ -0.35
SNF8-206ENST00000509989 SIX3O95343 332 aaPredicted RBP12.86□□□□□ -0.35
SNF8-206ENST00000509989 INHBAP08476 426 aa12.86□□□□□ -0.35
SNF8-206ENST00000509989 ZNF888P0CJ79 500 aaPredicted RBP12.86□□□□□ -0.35
SNF8-206ENST00000509989 C1GALT1C1LP0DN25 315 aa12.86□□□□□ -0.35
SNF8-206ENST00000509989 HRH2P25021 359 aa12.86□□□□□ -0.35
SNF8-206ENST00000509989 SERPINB8P50452 374 aa12.86□□□□□ -0.35
SNF8-206ENST00000509989 EMP3P54852 163 aa12.86□□□□□ -0.35
SNF8-206ENST00000509989 Q0VFX4 171 aa12.86□□□□□ -0.35
SNF8-206ENST00000509989 CDC16Q13042 620 aa12.86□□□□□ -0.35
SNF8-206ENST00000509989 DOC2AQ14183 400 aa12.86□□□□□ -0.35
SNF8-206ENST00000509989 SLBPQ14493 270 aaKnown RBP eCLIP12.86□□□□□ -0.35
SNF8-206ENST00000509989 SSPNQ14714 243 aa12.86□□□□□ -0.35
SNF8-206ENST00000509989 RBBP5Q15291 538 aaKnown RBP12.86□□□□□ -0.35
SNF8-206ENST00000509989 TECRLQ5HYJ1 363 aa12.86□□□□□ -0.35
SNF8-206ENST00000509989 SULT1C3Q6IMI6 304 aa12.86□□□□□ -0.35
SNF8-206ENST00000509989 KIRREL2Q6UWL6 708 aa12.86□□□□□ -0.35
SNF8-206ENST00000509989 RPS27LQ71UM5 84 aaKnown RBP12.86□□□□□ -0.35
SNF8-206ENST00000509989 APLFQ8IW19 511 aaPredicted RBP12.86□□□□□ -0.35
SNF8-206ENST00000509989 SNX31Q8N9S9 440 aa12.86□□□□□ -0.35
SNF8-206ENST00000509989 FDCSPQ8NFU4 85 aa12.86□□□□□ -0.35
SNF8-206ENST00000509989 NUDT9Q9BW91 350 aa12.86□□□□□ -0.35
SNF8-206ENST00000509989 RBCK1Q9BYM8 510 aa12.86□□□□□ -0.35
SNF8-206ENST00000509989 CD244Q9BZW8 370 aa12.86□□□□□ -0.35
SNF8-206ENST00000509989 DRC3Q9H069 523 aa12.86□□□□□ -0.35
SNF8-206ENST00000509989 DNAJC11Q9NVH1 559 aa12.86□□□□□ -0.35
SNF8-206ENST00000509989 NUDT4Q9NZJ9 180 aa12.86□□□□□ -0.35
SNF8-206ENST00000509989 NAALAD2Q9Y3Q0 740 aa12.86□□□□□ -0.35
SNF8-206ENST00000509989 SPENQ96T58 3664 aaKnown RBP12.85□□□□□ -0.35
SNF8-206ENST00000509989 EXOC1LA0A1B0GW35 172 aa12.85□□□□□ -0.35
SNF8-206ENST00000509989 EIF4E1BA6NMX2 242 aaKnown RBP12.85□□□□□ -0.35
SNF8-206ENST00000509989 STK16O75716 305 aa12.85□□□□□ -0.35
SNF8-206ENST00000509989 ALBP02768 609 aa12.85□□□□□ -0.35
SNF8-206ENST00000509989 CELA2AP08217 269 aa12.85□□□□□ -0.35
SNF8-206ENST00000509989 ABHD2P08910 425 aa12.85□□□□□ -0.35
SNF8-206ENST00000509989 HNRNPH1P31943 449 aaKnown RBP12.85□□□□□ -0.35
SNF8-206ENST00000509989 HNMTP50135 292 aa12.85□□□□□ -0.35
SNF8-206ENST00000509989 RAB8AP61006 207 aa12.85□□□□□ -0.35
SNF8-206ENST00000509989 VSNL1P62760 191 aa12.85□□□□□ -0.35
SNF8-206ENST00000509989 DSG2Q14126 1118 aa12.85□□□□□ -0.35
SNF8-206ENST00000509989 NAA30Q147X3 362 aaPredicted RBP12.85□□□□□ -0.35
SNF8-206ENST00000509989 GARNL3Q5VVW2 1013 aa12.85□□□□□ -0.35
SNF8-206ENST00000509989 PRMT9Q6P2P2 845 aa12.85□□□□□ -0.35
SNF8-206ENST00000509989 CEP128Q6ZU80 1094 aa12.85□□□□□ -0.35
SNF8-206ENST00000509989 TRMT10CQ7L0Y3 403 aaKnown RBP12.85□□□□□ -0.35
SNF8-206ENST00000509989 CYP4X1Q8N118 509 aa12.85□□□□□ -0.35
SNF8-206ENST00000509989 TMEM151AQ8N4L1 468 aa12.85□□□□□ -0.35
SNF8-206ENST00000509989 C9orf43Q8TAL5 461 aaPredicted RBP12.85□□□□□ -0.35
SNF8-206ENST00000509989 STAG3L4Q8TBR4 150 aa12.85□□□□□ -0.35
SNF8-206ENST00000509989 MZB1Q8WU39 189 aa12.85□□□□□ -0.35
SNF8-206ENST00000509989 THAP4Q8WY91 577 aa12.85□□□□□ -0.35
SNF8-206ENST00000509989 MIEF2Q96C03 454 aa12.85□□□□□ -0.35
SNF8-206ENST00000509989 TSPYL1Q9H0U9 437 aa12.85□□□□□ -0.35
SNF8-206ENST00000509989 SLC25A18Q9H1K4 315 aa12.85□□□□□ -0.35
SNF8-206ENST00000509989 WDR54Q9H977 334 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms