RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 HAUS8Q9BT25 410 aa14.54□□□□□ -0.08
TPM3-219ENST00000509409 FAM129AQ9BZQ8 928 aa14.54□□□□□ -0.08
TPM3-219ENST00000509409 DDX47Q9H0S4 455 aaKnown RBP14.54□□□□□ -0.08
TPM3-219ENST00000509409 TRMT1Q9NXH9 659 aaKnown RBP14.54□□□□□ -0.08
TPM3-219ENST00000509409 ARL15Q9NXU5 204 aa14.54□□□□□ -0.08
TPM3-219ENST00000509409 SH2B3Q9UQQ2 575 aa14.54□□□□□ -0.08
TPM3-219ENST00000509409 OR5H15A6NDH6 313 aa14.53□□□□□ -0.08
TPM3-219ENST00000509409 OR1F1O43749 312 aa14.53□□□□□ -0.08
TPM3-219ENST00000509409 PRAMEF2O60811 474 aa14.53□□□□□ -0.08
TPM3-219ENST00000509409 ZG16O60844 167 aa14.53□□□□□ -0.08
TPM3-219ENST00000509409 RDH16O75452 317 aa14.53□□□□□ -0.08
TPM3-219ENST00000509409 CRYABP02511 175 aaKnown RBP14.53□□□□□ -0.08
TPM3-219ENST00000509409 STSP08842 583 aa14.53□□□□□ -0.08
TPM3-219ENST00000509409 SLC35G6P0C7Q6 338 aa14.53□□□□□ -0.08
TPM3-219ENST00000509409 NPPBP16860 134 aa14.53□□□□□ -0.08
TPM3-219ENST00000509409 AGTR2P50052 363 aa14.53□□□□□ -0.08
TPM3-219ENST00000509409 CCR8P51685 355 aa14.53□□□□□ -0.08
TPM3-219ENST00000509409 EFNA3P52797 238 aa14.53□□□□□ -0.08
TPM3-219ENST00000509409 ZRSR2Q15696 482 aaKnown RBP14.53□□□□□ -0.08
TPM3-219ENST00000509409 INAQ16352 499 aa14.53□□□□□ -0.08
TPM3-219ENST00000509409 PHKG1Q16816 387 aa14.53□□□□□ -0.08
TPM3-219ENST00000509409 MSS51Q4VC12 460 aa14.53□□□□□ -0.08
TPM3-219ENST00000509409 HP1BP3Q5SSJ5 553 aaPredicted RBP14.53□□□□□ -0.08
TPM3-219ENST00000509409 HECTD2Q5U5R9 776 aa14.53□□□□□ -0.08
TPM3-219ENST00000509409 C1QL3Q5VWW1 255 aa14.53□□□□□ -0.08
TPM3-219ENST00000509409 DUPD1Q68J44 220 aa14.53□□□□□ -0.08
TPM3-219ENST00000509409 FCRLBQ6BAA4 426 aa14.53□□□□□ -0.08
TPM3-219ENST00000509409 KIAA0408Q6ZU52 694 aa14.53□□□□□ -0.08
TPM3-219ENST00000509409 ANKRD37Q7Z713 158 aa14.53□□□□□ -0.08
TPM3-219ENST00000509409 SHISA5Q8N114 240 aa14.53□□□□□ -0.08
TPM3-219ENST00000509409 TBC1D19Q8N5T2 526 aa14.53□□□□□ -0.08
TPM3-219ENST00000509409 MFSD9Q8NBP5 474 aa14.53□□□□□ -0.08
TPM3-219ENST00000509409 DNAJB8Q8NHS0 232 aa14.53□□□□□ -0.08
TPM3-219ENST00000509409 NR4A3Q92570 626 aa14.53□□□□□ -0.08
TPM3-219ENST00000509409 PYCR2Q96C36 320 aa14.53□□□□□ -0.08
TPM3-219ENST00000509409 CFAP36Q96G28 342 aa14.53□□□□□ -0.08
TPM3-219ENST00000509409 PEX11GQ96HA9 241 aa14.53□□□□□ -0.08
TPM3-219ENST00000509409 ZNF354BQ96LW1 612 aa14.53□□□□□ -0.08
TPM3-219ENST00000509409 SGPP1Q9BX95 441 aa14.53□□□□□ -0.08
TPM3-219ENST00000509409 KCNK13Q9HB14 408 aa14.53□□□□□ -0.08
TPM3-219ENST00000509409 SNX12Q9UMY4 172 aa14.53□□□□□ -0.08
TPM3-219ENST00000509409 VWA7Q9Y334 891 aa14.53□□□□□ -0.08
TPM3-219ENST00000509409 NAALAD2Q9Y3Q0 740 aa14.53□□□□□ -0.08
TPM3-219ENST00000509409 TEX15Q9BXT5 2789 aa14.52□□□□□ -0.08
TPM3-219ENST00000509409 CES2O00748 559 aa14.52□□□□□ -0.09
TPM3-219ENST00000509409 CDC123O75794 336 aaPredicted RBP14.52□□□□□ -0.09
TPM3-219ENST00000509409 GUCA1CO95843 209 aa14.52□□□□□ -0.09
TPM3-219ENST00000509409 CYC1P08574 325 aa14.52□□□□□ -0.09
TPM3-219ENST00000509409 MEF2AQ02078 507 aaPredicted RBP14.52□□□□□ -0.09
TPM3-219ENST00000509409 SRSF11Q05519 484 aaKnown RBP14.52□□□□□ -0.09
TPM3-219ENST00000509409 HERC3Q15034 1050 aa14.52□□□□□ -0.09
TPM3-219ENST00000509409 NSDHLQ15738 373 aa14.52□□□□□ -0.09
TPM3-219ENST00000509409 TEDDM1Q5T9Z0 273 aa14.52□□□□□ -0.09
TPM3-219ENST00000509409 ZNF324BQ6AW86 544 aaPredicted RBP14.52□□□□□ -0.09
TPM3-219ENST00000509409 PLAG1Q6DJT9 500 aa14.52□□□□□ -0.09
TPM3-219ENST00000509409 TMEM207Q6UWW9 146 aa14.52□□□□□ -0.09
TPM3-219ENST00000509409 IGDCC3Q8IVU1 814 aa14.52□□□□□ -0.09
TPM3-219ENST00000509409 PDIK1LQ8N165 341 aa14.52□□□□□ -0.09
TPM3-219ENST00000509409 ATL1Q8WXF7 558 aa14.52□□□□□ -0.09
TPM3-219ENST00000509409 CERS2Q96G23 380 aa14.52□□□□□ -0.09
TPM3-219ENST00000509409 SNF8Q96H20 258 aa14.52□□□□□ -0.09
TPM3-219ENST00000509409 RBCK1Q9BYM8 510 aa14.52□□□□□ -0.09
TPM3-219ENST00000509409 RNF32Q9H0A6 362 aa14.52□□□□□ -0.09
TPM3-219ENST00000509409 ABI3Q9P2A4 366 aa14.52□□□□□ -0.09
TPM3-219ENST00000509409 SLC17A6Q9P2U8 582 aa14.52□□□□□ -0.09
TPM3-219ENST00000509409 SLC22A7Q9Y694 548 aa14.52□□□□□ -0.09
TPM3-219ENST00000509409 NUP210LQ5VU65 1888 aa14.52□□□□□ -0.09
TPM3-219ENST00000509409 POLEQ07864 2286 aa14.52□□□□□ -0.09
TPM3-219ENST00000509409 TRGV8A0A0C4DH27 118 aa14.51□□□□□ -0.09
TPM3-219ENST00000509409 ZNF860A6NHJ4 632 aa14.51□□□□□ -0.09
TPM3-219ENST00000509409 NDUFS4O43181 175 aa14.51□□□□□ -0.09
TPM3-219ENST00000509409 SAT1P21673 171 aa14.51□□□□□ -0.09
TPM3-219ENST00000509409 ELK3P41970 407 aa14.51□□□□□ -0.09
TPM3-219ENST00000509409 PGGT1BP53609 377 aa14.51□□□□□ -0.09
TPM3-219ENST00000509409 AP1S2P56377 157 aa14.51□□□□□ -0.09
TPM3-219ENST00000509409 OR4D2P58180 307 aa14.51□□□□□ -0.09
TPM3-219ENST00000509409 CSHL1Q14406 222 aa14.51□□□□□ -0.09
TPM3-219ENST00000509409 EXT1Q16394 746 aa14.51□□□□□ -0.09
TPM3-219ENST00000509409 SFT2D3Q587I9 215 aa14.51□□□□□ -0.09
TPM3-219ENST00000509409 ZNF766Q5HY98 468 aa14.51□□□□□ -0.09
TPM3-219ENST00000509409 ACER2Q5QJU3 275 aa14.51□□□□□ -0.09
TPM3-219ENST00000509409 FAM45BPQ6NSW5 357 aa14.51□□□□□ -0.09
TPM3-219ENST00000509409 PDSS2Q86YH6 399 aa14.51□□□□□ -0.09
TPM3-219ENST00000509409 CNTN4Q8IWV2 1026 aa14.51□□□□□ -0.09
TPM3-219ENST00000509409 OR56A3Q8NH54 315 aa14.51□□□□□ -0.09
TPM3-219ENST00000509409 M1APQ8TC57 530 aa14.51□□□□□ -0.09
TPM3-219ENST00000509409 FAM45AQ8TCE6 357 aa14.51□□□□□ -0.09
TPM3-219ENST00000509409 SEC14L3Q9UDX4 400 aa14.51□□□□□ -0.09
TPM3-219ENST00000509409 UNC79Q9P2D8 2635 aa14.51□□□□□ -0.09
TPM3-219ENST00000509409 HEATR5BQ9P2D3 2071 aa14.51□□□□□ -0.09
TPM3-219ENST00000509409 DOPEY1Q5JWR5 2465 aa14.5□□□□□ -0.09
TPM3-219ENST00000509409 UNC5CO95185 931 aa14.5□□□□□ -0.09
TPM3-219ENST00000509409 IL10P22301 178 aa14.5□□□□□ -0.09
TPM3-219ENST00000509409 ST13P50502 369 aaKnown RBP14.5□□□□□ -0.09
TPM3-219ENST00000509409 TDGF1P3P51864 188 aa14.5□□□□□ -0.09
TPM3-219ENST00000509409 SKP1P63208 163 aa14.5□□□□□ -0.09
TPM3-219ENST00000509409 RBPJQ06330 500 aa14.5□□□□□ -0.09
TPM3-219ENST00000509409 RGS1Q08116 209 aa14.5□□□□□ -0.09
TPM3-219ENST00000509409 ABRAXAS2Q15018 415 aa14.5□□□□□ -0.09
TPM3-219ENST00000509409 MEP1AQ16819 746 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms