RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 ZNF462Q96JM2 2506 aa6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 NCF1BA6NI72 391 aaPredicted RBP6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 NCF1CA8MVU1 366 aaPredicted RBP6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 TARM1B6A8C7 271 aa6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 TRIM49D1C9J1S8 452 aa6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 H7BY64 318 aa6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 RRP8O43159 456 aaKnown RBP6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 OIP5O43482 229 aa6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 OR2B3O76000 313 aa6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 ONECUT2O95948 504 aa6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 ENO2P09104 434 aaPredicted RBP6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 NCF1P14598 390 aaPredicted RBP6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 STMN1P16949 149 aa6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 TFEBP19484 476 aa6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 NR1D1P20393 614 aa6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 CYP2A7P20853 494 aa6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 MAP4P27816 1152 aaKnown RBP6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 RPA3P35244 121 aaPredicted RBP6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 SOX18P35713 384 aa6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 GLRBP48167 497 aa6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 HSPA7P48741 367 aa6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 PMS2P54278 862 aa6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 AP1S2P56377 157 aa6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 MAT1AQ00266 395 aaKnown RBP6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 CDKL1Q00532 357 aa6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 CHAF1BQ13112 559 aa6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 E2F2Q14209 437 aa6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 TBR1Q16650 682 aa6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 SYT16Q17RD7 645 aa6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 WASHC2DQ5SRD0 308 aa6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 LRRC8EQ6NSJ5 796 aa6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 SH2D5Q6ZV89 423 aa6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 RPS27LQ71UM5 84 aaKnown RBP6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 ADAMTSL2Q86TH1 951 aa6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 NKAPQ8N5F7 415 aaKnown RBP6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 ABHD11Q8NFV4 315 aa6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 OR4K1Q8NGD4 311 aa6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 OR2W6PQ8NHA6 318 aa6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 UBTD2Q8WUN7 234 aa6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 CDKL2Q92772 493 aa6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 EXTL1Q92935 676 aa6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 EXT2Q93063 718 aa6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 KIAA1191Q96A73 305 aa6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 MED8Q96G25 268 aa6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 PRAP1Q96NZ9 151 aa6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 CYTH2Q99418 400 aa6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 ZFYVE21Q9BQ24 234 aa6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 SELENOSQ9BQE4 189 aa6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 C12orf65Q9H3J6 166 aaKnown RBP6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 GPN2Q9H9Y4 310 aaPredicted RBP6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 ACSS2Q9NR19 701 aa6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 ARL15Q9NXU5 204 aa6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 ANKMY1Q9P2S6 941 aa6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 MTRF1LQ9UGC7 380 aaKnown RBP6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 EMCNQ9ULC0 261 aa6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 SEC16AO15027 2179 aa6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 MED13Q9UHV7 2174 aa6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 CCDC88CQ9P219 2028 aa6.86□□□□□ -1.31
TOPBP1-207ENST00000509162 TENM4Q6N022 2769 aa6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 A0A096LPK6 155 aa6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 KRTAP9-6A0A140TA67 174 aa6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 A0A1B0GX78 115 aa6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 POC1B-GALNT4F8VUJ3 575 aa6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 DSCR3O14972 297 aa6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 KLK8O60259 260 aa6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 KERAO60938 352 aa6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 ALOX12BO75342 701 aa6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 DNAJB5O75953 348 aa6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 SASH3O75995 380 aa6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 FKBP9O95302 570 aa6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 SIX3O95343 332 aaPredicted RBP6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 FAM87AP0C7U9 286 aa6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 EZRP15311 586 aaKnown RBP6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 CMPK1P30085 196 aa6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 SPRP35270 261 aaPredicted RBP6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 GGT5P36269 586 aa6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 OR1D4P47884 311 aa6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 ARL4DP49703 201 aa6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 SERPINB8P50452 374 aa6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 SLC29A2Q14542 456 aa6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 TMTC4Q5T4D3 741 aa6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 CCDC81Q6ZN84 652 aa6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 SLCO4C1Q6ZQN7 724 aa6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 GPR155Q7Z3F1 870 aa6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 PPP1R32Q7Z5V6 425 aa6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 TMPRSS11BQ86T26 416 aa6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 THOC6Q86W42 341 aaKnown RBP6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 ZC3H7AQ8IWR0 971 aaKnown RBP6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 IFT20Q8IY31 132 aa6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 RNF175Q8N4F7 328 aa6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 AFAP1L2Q8N4X5 818 aa6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 IL22RA1Q8N6P7 574 aa6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 CSNK1A1LQ8N752 337 aa6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 KCT2Q8NC54 265 aa6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 OR8K5Q8NH50 307 aa6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 ZCCHC10Q8TBK6 192 aa6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 MAGEC3Q8TD91 643 aa6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 CREB3L4Q8TEY5 395 aa6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 SLC5A11Q8WWX8 675 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms