RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 RPL15P61313 204 aaKnown RBP3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 AP1S1P61966 158 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 HNRNPKP61978 463 aaKnown RBP eCLIP3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 SEMG2Q02383 582 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 IL10RBQ08334 325 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 SLC10A7Q0GE19 358 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 ELP6Q0PNE2 266 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 RALGDSQ12967 914 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 KLF9Q13886 244 aaPredicted RBP3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 MESDQ14696 234 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 NFATC4Q14934 902 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 PAFAH1B3Q15102 231 aaKnown RBP3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 PDK2Q15119 407 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 IRF4Q15306 451 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 SPA17Q15506 151 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 ETFDHQ16134 617 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 CDKN3Q16667 212 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 TIGD6Q17RP2 521 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 SMTNL2Q2TAL5 461 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 WSCD2Q2TBF2 565 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 DEFB133Q30KQ1 61 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 ATPAF1Q5TC12 328 aaPredicted RBP3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 TXNRD3NBQ6F5E7 133 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 LIN54Q6MZP7 749 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 ERAP2Q6P179 960 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 WDR93Q6P2C0 686 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 BRAT1Q6PJG6 821 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 C19orf48Q6RUI8 117 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 KLHL17Q6TDP4 642 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 TMCO3Q6UWJ1 677 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 MACC1Q6ZN28 852 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 DPPA4Q7L190 304 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 VSIG1Q86XK7 387 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 RFX6Q8HWS3 928 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 LRRC49Q8IUZ0 686 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 LRRC8AQ8IWT6 810 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 UEVLDQ8IX04 471 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 RBFAQ8N0V3 343 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 OR4N4Q8N0Y3 316 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 PGBD5Q8N414 524 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 RNF10Q8N5U6 811 aaKnown RBP3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 TEX26Q8N6G2 289 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 ZNF548Q8NEK5 533 aaPredicted RBP3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 ZNF564Q8TBZ8 553 aaPredicted RBP3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 LMX1AQ8TE12 382 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 CTNNBL1Q8WYA6 563 aaPredicted RBP3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 RAPGEF5Q92565 580 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 HSPH1Q92598 858 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 FAF2Q96CS3 445 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 ECHDC3Q96DC8 303 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 NXPE2Q96DL1 559 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 TRMT61AQ96FX7 289 aaKnown RBP3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 TBATAQ96M53 351 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 NSMCE3Q96MG7 304 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 ZNF778Q96MU6 729 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 ZNF599Q96NL3 588 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 TSGA13Q96PP4 275 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 CSPG4P5Q96PW8 444 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 PSKH2Q96QS6 385 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 ABHD14AQ9BUJ0 271 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 WRAP53Q9BUR4 548 aaKnown RBP3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 C1QTNF7Q9BXJ2 289 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 TRIM2Q9C040 744 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 SPRTNQ9H040 489 aaPredicted RBP3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 TCEAL2Q9H3H9 227 aaPredicted RBP3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 GRPEL1Q9HAV7 217 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 TMEM184CQ9NVA4 438 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 RCOR3Q9P2K3 495 aaPredicted RBP3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 SPASTQ9UBP0 616 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 GRHPRQ9UBQ7 328 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 DAPP1Q9UN19 280 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 ALG6Q9Y672 507 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 GOLGA4Q13439 2230 aaKnown RBP3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 SPTBN2O15020 2390 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 LRRK1Q38SD2 2015 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 FREM2Q5SZK8 3169 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 TDRD6O60522 2096 aaKnown RBP3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 PTPRBP23467 1997 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 A0A1W2PQ67 120 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 CPED1A4D0V7 1026 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 EME2A4GXA9 379 aaPredicted RBP3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 FAM90A18PA6NE21 464 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 FAM90A16PA6NEW6 464 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 HMX3A6NHT5 357 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 FAM90A9PA6NNJ1 464 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 A8MX80 341 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 FAM90A5PA8MXJ8 464 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 LMO7DNF2Z398 122 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 CASC3O15234 703 aaKnown RBP3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 TLX3O43711 291 aaPredicted RBP3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 RECQL5O94762 991 aaPredicted RBP3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 HOXC4P09017 264 aaPredicted RBP3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 CD48P09326 243 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 FAM90A15PP0C7V4 464 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 FAM90A14PP0C7W9 464 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 TGM2P21980 687 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 KDELR1P24390 212 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 GRK5P34947 590 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 TRIM23P36406 574 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 HSPA9P38646 679 aaKnown RBP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms