RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 MRPS22P82650 360 aaKnown RBP4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 OTUD4Q01804 1114 aaKnown RBP4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 GNA12Q03113 381 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 GAD2Q05329 585 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 ZNF33BQ06732 778 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 BST1Q10588 318 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 TROAPQ12815 778 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 MERTKQ12866 999 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 SEMA3BQ13214 749 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 CAMK1Q14012 370 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 CLCA4Q14CN2 919 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 SIX1Q15475 284 aaPredicted RBP4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 TAF5Q15542 800 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 IL17AQ16552 155 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 KNOP1Q1ED39 458 aaKnown RBP4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 FBXO43Q4G163 708 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 PIGGQ5H8A4 983 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 FGD3Q5JSP0 725 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 KCNT1Q5JUK3 1230 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 ZNF484Q5JVG2 852 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 SAMD4BQ5PRF9 694 aaKnown RBP4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 MANEAQ5SRI9 462 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 HYIQ5T013 277 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 UBAP2Q5T6F2 1119 aaKnown RBP4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 MANEALQ5VSG8 457 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 LRRC38Q5VT99 294 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 SHEQ5VZ18 495 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 FAM205BPQ63HN1 556 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 RINT1Q6NUQ1 792 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 KCTD8Q6ZWB6 473 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 FAM57BQ71RH2 274 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 ENOSF1Q7L5Y1 443 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 LINC00523Q86TU6 105 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 TLK2Q86UE8 772 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 STX12Q86Y82 276 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 WDR49Q8IV35 697 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 AQP12AQ8IXF9 295 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 RAVER1Q8IY67 606 aaKnown RBP4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 RCOR2Q8IZ40 523 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 SLC38A6Q8IZM9 456 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 LGI2Q8N0V4 545 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 SCML4Q8N228 414 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 UBE2J2Q8N2K1 259 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 FSTL5Q8N475 847 aaPredicted RBP4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 FNDC5Q8NAU1 212 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 TTLQ8NG68 377 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 OR5T2Q8NGG2 359 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 SLC44A1Q8WWI5 657 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 LRTOMTQ8WZ04 291 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 PIGKQ92643 395 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 SGK3Q96BR1 496 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 C11orf24Q96F05 449 aaPredicted RBP4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 PDXPQ96GD0 296 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 TMEM80Q96HE8 168 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 FAM111AQ96PZ2 611 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 CPXM1Q96SM3 734 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 TMEM246Q9BRR3 403 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 SYT11Q9BT88 431 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 CCDC32Q9BV29 185 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 APOL5Q9BWW9 433 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 C8orf33Q9H7E9 229 aaPredicted RBP4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 NIPAL2Q9H841 368 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 COPS7BQ9H9Q2 264 aaPredicted RBP4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 NANOGQ9H9S0 305 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 AGO4Q9HCK5 861 aaKnown RBP4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 MYOZ2Q9NPC6 264 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 HPS4Q9NQG7 708 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 PRDM8Q9NQV8 689 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 C1orf112Q9NSG2 853 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 MAP3K20Q9NYL2 800 aaKnown RBP4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 DCDC2Q9UHG0 476 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 AGO2Q9UKV8 859 aaKnown RBP4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 CDC14AQ9UNH5 594 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 PROCRQ9UNN8 238 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 TMEM5Q9Y2B1 443 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 ASB4Q9Y574 426 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 SESN1Q9Y6P5 492 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 RIC1Q4ADV7 1423 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 SIPA1L3O60292 1781 aaPredicted RBP4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 CACNA1AO00555 2505 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 PLIN4Q96Q06 1357 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 TYW5A2RUC4 315 aaKnown RBP4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 HMX3A6NHT5 357 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 FOXO6A8MYZ6 492 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 KPNA7A9QM74 516 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 ZNF487B1APH4 448 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 PRSS44E7EML9 344 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 J3QRK9 145 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 TNPO2O14787 897 aaKnown RBP4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 ZBTB5O15062 677 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 KPNA5O15131 536 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 GATCO43716 136 aaKnown RBP4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 PDE9AO76083 593 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 WDR47O94967 919 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 INMTO95050 263 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 LYPLA2O95372 231 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 SGPL1O95470 568 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 SEC24AO95486 1093 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 OLFM2O95897 454 aa4.42□□□□□ -1.7
PDLIM5-211ENST00000508531 HPRP00739 348 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms