RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 RP9Q8TA86 221 aaKnown RBP3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 TAS1R2Q8TE23 839 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 TNFRSF14Q92956 283 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 TMIGD2Q96BF3 282 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 PPP1R14BQ96C90 147 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 MSI2Q96DH6 328 aaKnown RBP3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 LINC00615Q96LM1 132 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 FOXN4Q96NZ1 517 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 PTDSS2Q9BVG9 487 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 IDI2Q9BXS1 227 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 DRC3Q9H069 523 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 OR52A5Q9H2C5 316 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 PDZD7Q9H5P4 517 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 RANBP3Q9H6Z4 567 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 ROPN1Q9HAT0 212 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 MAGEF1Q9HAY2 307 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 SGK2Q9HBY8 427 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 NT5MQ9NPB1 228 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 SLC6A13Q9NSD5 602 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 TXLNGQ9NUQ3 528 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 SETD4Q9NVD3 440 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 RBAKQ9NYW8 714 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 IFNKQ9P0W0 207 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 ERVK-18Q9QC07 812 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 ATXN10Q9UBB4 475 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 HACL1Q9UJ83 578 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 MRPS33Q9Y291 106 aaKnown RBP3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 IFT52Q9Y366 437 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 FAM96BQ9Y3D0 163 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 OR10H1Q9Y4A9 318 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 ROCK1Q13464 1354 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 A0A1W2PQF6 199 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 GXYLT2A0PJZ3 443 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 POC1B-GALNT4F8VUJ3 575 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 H7C1Q1 480 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 TLR4O00206 839 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 NDUFAB1O14561 156 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 MDM4O15151 490 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 LDLRAD4O15165 306 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 CALUO43852 315 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 CBFA2T3O75081 653 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 CSO75390 466 aaKnown RBP3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 CSDE1O75534 798 aaKnown RBP3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 DDNO94850 711 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 TMCC1O94876 653 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 KDM4BO94953 1096 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 WDR47O94967 919 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 SEC31AO94979 1220 aaKnown RBP3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 NKX2-2O95096 273 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 PIGNO95427 931 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 IGHEP01854 428 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 SERPIND1P05546 499 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 CAPN1P07384 714 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 KRT7P08729 469 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 OR8G3PP0DMU2 310 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 SPP1P10451 314 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 SLC2A4P14672 509 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 DARSP14868 501 aaKnown RBP3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 ZNF44P15621 663 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 UGT1A6P19224 532 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 EIF2S2P20042 333 aaKnown RBP3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 PSMA2P25787 234 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 ITGB8P26012 769 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 SLC6A6P31641 620 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 GJC1P36383 396 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 MAP2K2P36507 400 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 PRCPP42785 496 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 SLC1A3P43003 542 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 HSPA13P48723 471 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 FNTAP49354 379 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 DGKEP52429 567 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 MVDP53602 400 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 CDH4P55283 916 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 CLDN8P56748 225 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 TNNC1P63316 161 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 CCZ1BP86790 482 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 CCZ1P86791 482 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 SORDQ00796 357 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 CACNG1Q06432 222 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 SLC34A1Q06495 639 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 FADDQ13158 208 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 STIM1Q13586 685 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 SHBQ15464 509 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 SLC18A3Q16572 532 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 MAPK6Q16659 721 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 ZNF829Q3KNS6 432 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 AMZ1Q400G9 498 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 GXYLT1Q4G148 440 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 Q5PR19 223 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 SAPCD1Q5SSQ6 148 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 LDLRAP1Q5SW96 308 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 NDUFAF5Q5TEU4 345 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 TXNRD3NBQ6F5E7 133 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 TMEM225Q6GV28 225 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 RGS7BPQ6MZT1 257 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 C1orf94Q6P1W5 598 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 TTC27Q6P3X3 843 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 Q6ZPB1 254 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 TRPM8Q7Z2W7 1104 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 GPR142Q7Z601 462 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms