RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 A0A1B0GUH1 482 aa13.64□□□□□ -0.23
HMGCS1-203ENST00000507004 TRBC2A0A5B9 178 aa13.64□□□□□ -0.23
HMGCS1-203ENST00000507004 JAK1P23458 1154 aa13.64□□□□□ -0.23
HMGCS1-203ENST00000507004 AHRP35869 848 aa13.64□□□□□ -0.23
HMGCS1-203ENST00000507004 ELK3P41970 407 aa13.64□□□□□ -0.23
HMGCS1-203ENST00000507004 XCR1P46094 333 aa13.64□□□□□ -0.23
HMGCS1-203ENST00000507004 CDKN2DP55273 166 aa13.64□□□□□ -0.23
HMGCS1-203ENST00000507004 TIAL1Q01085 375 aaKnown RBP eCLIP13.64□□□□□ -0.23
HMGCS1-203ENST00000507004 MGAT5Q09328 741 aa13.64□□□□□ -0.23
HMGCS1-203ENST00000507004 CBLBQ13191 982 aa13.64□□□□□ -0.23
HMGCS1-203ENST00000507004 CSHL1Q14406 222 aa13.64□□□□□ -0.23
HMGCS1-203ENST00000507004 KCTD19Q17RG1 926 aaPredicted RBP13.64□□□□□ -0.23
HMGCS1-203ENST00000507004 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.64□□□□□ -0.233e-9■■□□□ 13.4
HMGCS1-203ENST00000507004 RBM20Q5T481 1227 aaKnown RBP13.64□□□□□ -0.23
HMGCS1-203ENST00000507004 MFSD4BQ5TF39 518 aa13.64□□□□□ -0.23
HMGCS1-203ENST00000507004 HIBCHQ6NVY1 386 aaPredicted RBP13.64□□□□□ -0.23
HMGCS1-203ENST00000507004 PLPP5Q8NEB5 264 aa13.64□□□□□ -0.23
HMGCS1-203ENST00000507004 ALKBH8Q96BT7 664 aaKnown RBP13.64□□□□□ -0.23
HMGCS1-203ENST00000507004 SNF8Q96H20 258 aa13.64□□□□□ -0.23
HMGCS1-203ENST00000507004 ZNF354BQ96LW1 612 aa13.64□□□□□ -0.23
HMGCS1-203ENST00000507004 CYTH2Q99418 400 aa13.64□□□□□ -0.23
HMGCS1-203ENST00000507004 NAPGQ99747 312 aaPredicted RBP13.64□□□□□ -0.23
HMGCS1-203ENST00000507004 SLX1AQ9BQ83 275 aa13.64□□□□□ -0.23
HMGCS1-203ENST00000507004 VN1R1Q9GZP7 353 aa13.64□□□□□ -0.23
HMGCS1-203ENST00000507004 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.64□□□□□ -0.23
HMGCS1-203ENST00000507004 TRMT1Q9NXH9 659 aaKnown RBP13.64□□□□□ -0.23
HMGCS1-203ENST00000507004 CHMP2BQ9UQN3 213 aa13.64□□□□□ -0.23
HMGCS1-203ENST00000507004 NTNG1Q9Y2I2 539 aa13.64□□□□□ -0.23
HMGCS1-203ENST00000507004 DYRK1BQ9Y463 629 aa13.64□□□□□ -0.23
HMGCS1-203ENST00000507004 PCDHGB6Q9Y5F9 930 aa13.64□□□□□ -0.23
HMGCS1-203ENST00000507004 CSAG2Q9Y5P2 127 aa13.64□□□□□ -0.23
HMGCS1-203ENST00000507004 TEX264Q9Y6I9 313 aa13.64□□□□□ -0.23
HMGCS1-203ENST00000507004 OR5H15A6NDH6 313 aa13.63□□□□□ -0.23
HMGCS1-203ENST00000507004 SEC31AO94979 1220 aaKnown RBP13.63□□□□□ -0.23
HMGCS1-203ENST00000507004 MLYCDO95822 493 aa13.63□□□□□ -0.23
HMGCS1-203ENST00000507004 TSPAN12O95859 305 aa13.63□□□□□ -0.23
HMGCS1-203ENST00000507004 F7P08709 466 aaPredicted RBP13.63□□□□□ -0.23
HMGCS1-203ENST00000507004 CDH1P12830 882 aa13.63□□□□□ -0.23
HMGCS1-203ENST00000507004 IL1RNP18510 177 aa13.63□□□□□ -0.23
HMGCS1-203ENST00000507004 GSTM2P28161 218 aa13.63□□□□□ -0.23
HMGCS1-203ENST00000507004 HNMTP50135 292 aa13.63□□□□□ -0.23
HMGCS1-203ENST00000507004 GNG11P61952 73 aa13.63□□□□□ -0.23
HMGCS1-203ENST00000507004 MAT1AQ00266 395 aaKnown RBP13.63□□□□□ -0.23
HMGCS1-203ENST00000507004 CDKL1Q00532 357 aa13.63□□□□□ -0.23
HMGCS1-203ENST00000507004 PHKG1Q16816 387 aa13.63□□□□□ -0.23
HMGCS1-203ENST00000507004 SYT16Q17RD7 645 aa13.63□□□□□ -0.23
HMGCS1-203ENST00000507004 MSS51Q4VC12 460 aa13.63□□□□□ -0.23
HMGCS1-203ENST00000507004 FAAH2Q6GMR7 532 aa13.63□□□□□ -0.23
HMGCS1-203ENST00000507004 ABHD13Q7L211 337 aa13.63□□□□□ -0.23
HMGCS1-203ENST00000507004 LGI4Q8N135 537 aa13.63□□□□□ -0.23
HMGCS1-203ENST00000507004 TRPV3Q8NET8 790 aa13.63□□□□□ -0.23
HMGCS1-203ENST00000507004 M1APQ8TC57 530 aa13.63□□□□□ -0.23
HMGCS1-203ENST00000507004 SLC5A11Q8WWX8 675 aa13.63□□□□□ -0.23
HMGCS1-203ENST00000507004 CFAP36Q96G28 342 aa13.63□□□□□ -0.23
HMGCS1-203ENST00000507004 LPAR4Q99677 370 aa13.63□□□□□ -0.23
HMGCS1-203ENST00000507004 AIF1LQ9BQI0 150 aa13.63□□□□□ -0.23
HMGCS1-203ENST00000507004 SYNPO2LQ9H987 977 aa13.63□□□□□ -0.23
HMGCS1-203ENST00000507004 PELI2Q9HAT8 420 aa13.63□□□□□ -0.23
HMGCS1-203ENST00000507004 POPDC3Q9HBV1 291 aa13.63□□□□□ -0.23
HMGCS1-203ENST00000507004 ZFP69BQ9UJL9 534 aa13.63□□□□□ -0.23
HMGCS1-203ENST00000507004 KCNE2Q9Y6J6 123 aa13.63□□□□□ -0.23
HMGCS1-203ENST00000507004 DOPEY1Q5JWR5 2465 aa13.63□□□□□ -0.23
HMGCS1-203ENST00000507004 SYNDIG1LA6NDD5 238 aa13.62□□□□□ -0.23
HMGCS1-203ENST00000507004 MAGEB17A8MXT2 336 aa13.62□□□□□ -0.23
HMGCS1-203ENST00000507004 E2F3O00716 465 aa13.62□□□□□ -0.23
HMGCS1-203ENST00000507004 FFAR3O14843 346 aa13.62□□□□□ -0.23
HMGCS1-203ENST00000507004 GPR42O15529 346 aa13.62□□□□□ -0.23
HMGCS1-203ENST00000507004 OR1F1O43749 312 aa13.62□□□□□ -0.23
HMGCS1-203ENST00000507004 ZNF37AP17032 561 aaPredicted RBP13.62□□□□□ -0.23
HMGCS1-203ENST00000507004 ALOX12P18054 663 aa13.62□□□□□ -0.23
HMGCS1-203ENST00000507004 HPDP32754 393 aaPredicted RBP13.62□□□□□ -0.23
HMGCS1-203ENST00000507004 TAS2R50P59544 299 aa13.62□□□□□ -0.23
HMGCS1-203ENST00000507004 BTBD16Q32M84 506 aa13.62□□□□□ -0.23
HMGCS1-203ENST00000507004 ADAMTSL2Q86TH1 951 aa13.62□□□□□ -0.23
HMGCS1-203ENST00000507004 CREG2Q8IUH2 290 aa13.62□□□□□ -0.23
HMGCS1-203ENST00000507004 KLHL7Q8IXQ5 586 aa13.62□□□□□ -0.23
HMGCS1-203ENST00000507004 AFAP1L2Q8N4X5 818 aa13.62□□□□□ -0.23
HMGCS1-203ENST00000507004 SIRT6Q8N6T7 355 aa13.62□□□□□ -0.23
HMGCS1-203ENST00000507004 HORMAD2Q8N7B1 307 aa13.62□□□□□ -0.23
HMGCS1-203ENST00000507004 CATSPER1Q8NEC5 780 aa13.62□□□□□ -0.23
HMGCS1-203ENST00000507004 TTLQ8NG68 377 aa13.62□□□□□ -0.23
HMGCS1-203ENST00000507004 NT5CQ8TCD5 201 aa13.62□□□□□ -0.23
HMGCS1-203ENST00000507004 NR4A3Q92570 626 aa13.62□□□□□ -0.23
HMGCS1-203ENST00000507004 CDKL2Q92772 493 aa13.62□□□□□ -0.23
HMGCS1-203ENST00000507004 SEC16BQ96JE7 1060 aa13.62□□□□□ -0.23
HMGCS1-203ENST00000507004 MAGEB10Q96LZ2 347 aaPredicted RBP13.62□□□□□ -0.23
HMGCS1-203ENST00000507004 CAPS2Q9BXY5 557 aa13.62□□□□□ -0.23
HMGCS1-203ENST00000507004 MMP25Q9NPA2 562 aa13.62□□□□□ -0.23
HMGCS1-203ENST00000507004 STMN3Q9NZ72 180 aa13.62□□□□□ -0.23
HMGCS1-203ENST00000507004 FEZF1A0PJY2 475 aa13.61□□□□□ -0.23
HMGCS1-203ENST00000507004 EFCAB8A8MWE9 144 aa13.61□□□□□ -0.23
HMGCS1-203ENST00000507004 E7ESA3 106 aa13.61□□□□□ -0.23
HMGCS1-203ENST00000507004 SGK494L7N484 410 aa13.61□□□□□ -0.23
HMGCS1-203ENST00000507004 NDUFS4O43181 175 aa13.61□□□□□ -0.23
HMGCS1-203ENST00000507004 LCMT2O60294 686 aaKnown RBP13.61□□□□□ -0.23
HMGCS1-203ENST00000507004 PRAMEF2O60811 474 aa13.61□□□□□ -0.23
HMGCS1-203ENST00000507004 JRKO75564 520 aa13.61□□□□□ -0.23
HMGCS1-203ENST00000507004 RASAL1O95294 804 aa13.61□□□□□ -0.23
HMGCS1-203ENST00000507004 STSP08842 583 aa13.61□□□□□ -0.23
HMGCS1-203ENST00000507004 ITGAMP11215 1152 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms