RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 HIST2H2ACQ16777 129 aaPredicted RBP12.25□□□□□ -0.45
TCOF1-210ENST00000506767 HKDC1Q2TB90 917 aa12.25□□□□□ -0.45
TCOF1-210ENST00000506767 TBC1D25Q3MII6 688 aa12.25□□□□□ -0.45
TCOF1-210ENST00000506767 YOD1Q5VVQ6 348 aaPredicted RBP12.25□□□□□ -0.45
TCOF1-210ENST00000506767 HIST2H2AA3Q6FI13 130 aa12.25□□□□□ -0.45
TCOF1-210ENST00000506767 RHBDD2Q6NTF9 364 aa12.25□□□□□ -0.45
TCOF1-210ENST00000506767 LETMD1Q6P1Q0 360 aa12.25□□□□□ -0.45
TCOF1-210ENST00000506767 MED27Q6P2C8 311 aa12.25□□□□□ -0.45
TCOF1-210ENST00000506767 MILR1Q7Z6M3 343 aa12.25□□□□□ -0.45
TCOF1-210ENST00000506767 SYVN1Q86TM6 617 aa12.25□□□□□ -0.45
TCOF1-210ENST00000506767 ASPGQ86U10 573 aa12.25□□□□□ -0.45
TCOF1-210ENST00000506767 TMEM126BQ8IUX1 230 aa12.25□□□□□ -0.45
TCOF1-210ENST00000506767 NUDCD3Q8IVD9 361 aa12.25□□□□□ -0.45
TCOF1-210ENST00000506767 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.25□□□□□ -0.45
TCOF1-210ENST00000506767 ZNF655Q8N720 491 aaPredicted RBP12.25□□□□□ -0.45
TCOF1-210ENST00000506767 CSNK1A1LQ8N752 337 aa12.25□□□□□ -0.45
TCOF1-210ENST00000506767 ANKRD42Q8N9B4 389 aa12.25□□□□□ -0.45
TCOF1-210ENST00000506767 CAMKVQ8NCB2 501 aa12.25□□□□□ -0.45
TCOF1-210ENST00000506767 TRPV3Q8NET8 790 aa12.25□□□□□ -0.45
TCOF1-210ENST00000506767 TTLQ8NG68 377 aa12.25□□□□□ -0.45
TCOF1-210ENST00000506767 OR7G3Q8NG95 312 aa12.25□□□□□ -0.45
TCOF1-210ENST00000506767 WDR20Q8TBZ3 569 aa12.25□□□□□ -0.45
TCOF1-210ENST00000506767 NT5CQ8TCD5 201 aa12.25□□□□□ -0.45
TCOF1-210ENST00000506767 SLC13A3Q8WWT9 602 aa12.25□□□□□ -0.45
TCOF1-210ENST00000506767 UBE2E3Q969T4 207 aa12.25□□□□□ -0.45
TCOF1-210ENST00000506767 CNDP1Q96KN2 507 aa12.25□□□□□ -0.45
TCOF1-210ENST00000506767 MAGEB10Q96LZ2 347 aaPredicted RBP12.25□□□□□ -0.45
TCOF1-210ENST00000506767 TRPS1Q9UHF7 1281 aa12.25□□□□□ -0.45
TCOF1-210ENST00000506767 RUVBL1Q9Y265 456 aaKnown RBP12.25□□□□□ -0.45
TCOF1-210ENST00000506767 STK38LQ9Y2H1 464 aa12.25□□□□□ -0.45
TCOF1-210ENST00000506767 HYKKA2RU49 373 aa12.24□□□□□ -0.45
TCOF1-210ENST00000506767 H3BQF6 201 aa12.24□□□□□ -0.45
TCOF1-210ENST00000506767 CPNE3O75131 537 aaKnown RBP12.24□□□□□ -0.45
TCOF1-210ENST00000506767 CLEC3AO75596 197 aa12.24□□□□□ -0.45
TCOF1-210ENST00000506767 STK17BO94768 372 aa12.24□□□□□ -0.45
TCOF1-210ENST00000506767 OR4F21O95013 312 aa12.24□□□□□ -0.45
TCOF1-210ENST00000506767 MED26O95402 600 aa12.24□□□□□ -0.45
TCOF1-210ENST00000506767 NTRK1P04629 796 aa12.24□□□□□ -0.45
TCOF1-210ENST00000506767 EIF2S1P05198 315 aaKnown RBP12.24□□□□□ -0.45
TCOF1-210ENST00000506767 SERPINA6P08185 405 aa12.24□□□□□ -0.45
TCOF1-210ENST00000506767 HBQ1P09105 142 aa12.24□□□□□ -0.45
TCOF1-210ENST00000506767 RORAP35398 523 aa12.24□□□□□ -0.45
TCOF1-210ENST00000506767 SERPINB5P36952 375 aa12.24□□□□□ -0.45
TCOF1-210ENST00000506767 CCR10P46092 362 aa12.24□□□□□ -0.45
TCOF1-210ENST00000506767 ARSFP54793 590 aa12.24□□□□□ -0.45
TCOF1-210ENST00000506767 PKNOX1P55347 436 aa12.24□□□□□ -0.45
TCOF1-210ENST00000506767 GALNT1Q10472 559 aaPredicted RBP12.24□□□□□ -0.45
TCOF1-210ENST00000506767 MAP7Q14244 749 aa12.24□□□□□ -0.45
TCOF1-210ENST00000506767 RBBP7Q16576 425 aa12.24□□□□□ -0.45
TCOF1-210ENST00000506767 CPSF6Q16630 551 aaKnown RBP eCLIP12.24□□□□□ -0.45
TCOF1-210ENST00000506767 FAM214AQ32MH5 1076 aa12.24□□□□□ -0.45
TCOF1-210ENST00000506767 SDK2Q58EX2 2172 aa12.24□□□□□ -0.45
TCOF1-210ENST00000506767 CFAP157Q5JU67 520 aa12.24□□□□□ -0.45
TCOF1-210ENST00000506767 GARNL3Q5VVW2 1013 aa12.24□□□□□ -0.45
TCOF1-210ENST00000506767 CES4AQ5XG92 561 aa12.24□□□□□ -0.45
TCOF1-210ENST00000506767 ZNF385CQ66K41 422 aaPredicted RBP12.24□□□□□ -0.45
TCOF1-210ENST00000506767 ADNP2Q6IQ32 1131 aa12.24□□□□□ -0.45
TCOF1-210ENST00000506767 ZNF517Q6ZMY9 492 aaPredicted RBP12.24□□□□□ -0.45
TCOF1-210ENST00000506767 TIPARPQ7Z3E1 657 aaKnown RBP12.24□□□□□ -0.45
TCOF1-210ENST00000506767 DTX1Q86Y01 620 aa12.24□□□□□ -0.45
TCOF1-210ENST00000506767 TTC29Q8NA56 475 aaPredicted RBP12.24□□□□□ -0.45
TCOF1-210ENST00000506767 AGAP11Q8TF27 550 aa12.24□□□□□ -0.45
TCOF1-210ENST00000506767 C10orf90Q96M02 699 aa12.24□□□□□ -0.45
TCOF1-210ENST00000506767 MACROD1Q9BQ69 325 aa12.24□□□□□ -0.45
TCOF1-210ENST00000506767 TRMOQ9BU70 441 aa12.24□□□□□ -0.45
TCOF1-210ENST00000506767 ULBP3Q9BZM4 244 aa12.24□□□□□ -0.45
TCOF1-210ENST00000506767 SLC6A16Q9GZN6 736 aa12.24□□□□□ -0.45
TCOF1-210ENST00000506767 AICDAQ9GZX7 198 aa12.24□□□□□ -0.45
TCOF1-210ENST00000506767 ACTR5Q9H9F9 607 aaPredicted RBP12.24□□□□□ -0.45
TCOF1-210ENST00000506767 MLXIPLQ9NP71 852 aa12.24□□□□□ -0.45
TCOF1-210ENST00000506767 CUTCQ9NTM9 273 aa12.24□□□□□ -0.45
TCOF1-210ENST00000506767 NKIRAS1Q9NYS0 192 aa12.24□□□□□ -0.45
TCOF1-210ENST00000506767 SRPK3Q9UPE1 567 aa12.24□□□□□ -0.45
TCOF1-210ENST00000506767 PCDHGA11Q9Y5H2 935 aa12.24□□□□□ -0.45
TCOF1-210ENST00000506767 WDR91A4D1P6 747 aa12.23□□□□□ -0.45
TCOF1-210ENST00000506767 ANKDD1BA6NHY2 528 aa12.23□□□□□ -0.45
TCOF1-210ENST00000506767 NDUFS4O43181 175 aa12.23□□□□□ -0.45
TCOF1-210ENST00000506767 ESRRBO95718 433 aa12.23□□□□□ -0.45
TCOF1-210ENST00000506767 ONECUT2O95948 504 aa12.23□□□□□ -0.45
TCOF1-210ENST00000506767 STATHP02808 62 aa12.23□□□□□ -0.45
TCOF1-210ENST00000506767 SLC35G6P0C7Q6 338 aa12.23□□□□□ -0.45
TCOF1-210ENST00000506767 SMIM10L1P0DMW3 83 aa12.23□□□□□ -0.45
TCOF1-210ENST00000506767 SERPINB1P30740 379 aa12.23□□□□□ -0.45
TCOF1-210ENST00000506767 ARRB2P32121 409 aa12.23□□□□□ -0.45
TCOF1-210ENST00000506767 HPDP32754 393 aaPredicted RBP12.23□□□□□ -0.45
TCOF1-210ENST00000506767 PIK3CBP42338 1070 aa12.23□□□□□ -0.45
TCOF1-210ENST00000506767 SNRPNP63162 240 aaKnown RBP12.23□□□□□ -0.45
TCOF1-210ENST00000506767 GPS2Q13227 327 aa12.23□□□□□ -0.45
TCOF1-210ENST00000506767 FAM53BQ14153 422 aa12.23□□□□□ -0.45
TCOF1-210ENST00000506767 ZRSR2Q15696 482 aaKnown RBP12.23□□□□□ -0.45
TCOF1-210ENST00000506767 ADPRMQ3LIE5 342 aa12.23□□□□□ -0.45
TCOF1-210ENST00000506767 HHATQ5VTY9 493 aa12.23□□□□□ -0.45
TCOF1-210ENST00000506767 TMEM214Q6NUQ4 689 aaKnown RBP12.23□□□□□ -0.45
TCOF1-210ENST00000506767 ATG14Q6ZNE5 492 aa12.23□□□□□ -0.45
TCOF1-210ENST00000506767 ZCCHC23Q6ZST2 131 aa12.23□□□□□ -0.45
TCOF1-210ENST00000506767 GPRIN3Q6ZVF9 776 aa12.23□□□□□ -0.45
TCOF1-210ENST00000506767 ZFAND4Q86XD8 727 aa12.23□□□□□ -0.45
TCOF1-210ENST00000506767 DSELQ8IZU8 1212 aa12.23□□□□□ -0.45
TCOF1-210ENST00000506767 KCT2Q8NC54 265 aa12.23□□□□□ -0.45
TCOF1-210ENST00000506767 MDM1Q8TC05 714 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms