RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 ARHGEF39Q8N4T4 335 aa15.87■□□□□ 0.13
SNCA-209ENST00000506244 ADAMTS17Q8TE56 1095 aa15.87■□□□□ 0.13
SNCA-209ENST00000506244 TM4SF19Q96DZ7 209 aa15.87■□□□□ 0.13
SNCA-209ENST00000506244 MMABQ96EY8 250 aaPredicted RBP15.87■□□□□ 0.13
SNCA-209ENST00000506244 EFCAB11Q9BUY7 163 aa15.87■□□□□ 0.13
SNCA-209ENST00000506244 SYNPO2LQ9H987 977 aa15.87■□□□□ 0.13
SNCA-209ENST00000506244 ANKHQ9HCJ1 492 aa15.87■□□□□ 0.13
SNCA-209ENST00000506244 SLC22A11Q9NSA0 550 aa15.87■□□□□ 0.13
SNCA-209ENST00000506244 MAP4K5Q9Y4K4 846 aa15.87■□□□□ 0.13
SNCA-209ENST00000506244 TNPO3Q9Y5L0 923 aaKnown RBP15.87■□□□□ 0.13
SNCA-209ENST00000506244 IGSF10Q6WRI0 2623 aa15.87■□□□□ 0.13
SNCA-209ENST00000506244 NBEAQ8NFP9 2946 aa15.87■□□□□ 0.13
SNCA-209ENST00000506244 K7EPI3 171 aa15.86■□□□□ 0.13
SNCA-209ENST00000506244 PEX12O00623 359 aa15.86■□□□□ 0.13
SNCA-209ENST00000506244 LCMT2O60294 686 aaKnown RBP15.86■□□□□ 0.13
SNCA-209ENST00000506244 RFPL1O75677 317 aa15.86■□□□□ 0.13
SNCA-209ENST00000506244 MED26O95402 600 aa15.86■□□□□ 0.13
SNCA-209ENST00000506244 FURINP09958 794 aa15.86■□□□□ 0.13
SNCA-209ENST00000506244 OTX2P32243 289 aa15.86■□□□□ 0.13
SNCA-209ENST00000506244 ALDH18A1P54886 795 aaKnown RBP15.86■□□□□ 0.13
SNCA-209ENST00000506244 LAPTM5Q13571 262 aa15.86■□□□□ 0.13
SNCA-209ENST00000506244 SLBPQ14493 270 aaKnown RBP eCLIP15.86■□□□□ 0.13
SNCA-209ENST00000506244 SETDB1Q15047 1291 aa15.86■□□□□ 0.13
SNCA-209ENST00000506244 RBBP5Q15291 538 aaKnown RBP15.86■□□□□ 0.13
SNCA-209ENST00000506244 LINC00303Q3SY05 128 aa15.86■□□□□ 0.13
SNCA-209ENST00000506244 TECRLQ5HYJ1 363 aa15.86■□□□□ 0.13
SNCA-209ENST00000506244 PAGE2BQ5JRK9 111 aa15.86■□□□□ 0.13
SNCA-209ENST00000506244 METTL2BQ6P1Q9 378 aaKnown RBP15.86■□□□□ 0.13
SNCA-209ENST00000506244 WDR93Q6P2C0 686 aa15.86■□□□□ 0.13
SNCA-209ENST00000506244 SLCO4C1Q6ZQN7 724 aa15.86■□□□□ 0.13
SNCA-209ENST00000506244 ABHD13Q7L211 337 aa15.86■□□□□ 0.13
SNCA-209ENST00000506244 MRGPREQ86SM8 312 aa15.86■□□□□ 0.13
SNCA-209ENST00000506244 APLFQ8IW19 511 aaPredicted RBP15.86■□□□□ 0.13
SNCA-209ENST00000506244 ZCCHC10Q8TBK6 192 aa15.86■□□□□ 0.13
SNCA-209ENST00000506244 NT5CQ8TCD5 201 aa15.86■□□□□ 0.13
SNCA-209ENST00000506244 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.86■□□□□ 0.13
SNCA-209ENST00000506244 PTCD3Q96EY7 689 aaKnown RBP15.86■□□□□ 0.13
SNCA-209ENST00000506244 SCYL1Q96KG9 808 aa15.86■□□□□ 0.13
SNCA-209ENST00000506244 SPSB2Q99619 263 aa15.86■□□□□ 0.13
SNCA-209ENST00000506244 EPB41L4BQ9H329 900 aa15.86■□□□□ 0.13
SNCA-209ENST00000506244 MKKSQ9NPJ1 570 aaPredicted RBP15.86■□□□□ 0.13
SNCA-209ENST00000506244 GEMIN8Q9NWZ8 242 aaKnown RBP15.86■□□□□ 0.13
SNCA-209ENST00000506244 TRPC4Q9UBN4 977 aa15.86■□□□□ 0.13
SNCA-209ENST00000506244 CTSFQ9UBX1 484 aa15.86■□□□□ 0.13
SNCA-209ENST00000506244 RALYQ9UKM9 306 aaKnown RBP15.86■□□□□ 0.13
SNCA-209ENST00000506244 ANGPTL3Q9Y5C1 460 aa15.86■□□□□ 0.13
SNCA-209ENST00000506244 KCNMB2Q9Y691 235 aa15.86■□□□□ 0.13
SNCA-209ENST00000506244 SLC22A7Q9Y694 548 aa15.86■□□□□ 0.13
SNCA-209ENST00000506244 IGLV3-12A0A075B6K2 115 aa15.85■□□□□ 0.13
SNCA-209ENST00000506244 A0A0A6YYC8 382 aaPredicted RBP15.85■□□□□ 0.13
SNCA-209ENST00000506244 I3L1I5 382 aaPredicted RBP15.85■□□□□ 0.13
SNCA-209ENST00000506244 CNOT3O75175 753 aaKnown RBP15.85■□□□□ 0.13
SNCA-209ENST00000506244 SMIM24O75264 130 aa15.85■□□□□ 0.13
SNCA-209ENST00000506244 STATHP02808 62 aa15.85■□□□□ 0.13
SNCA-209ENST00000506244 SERPIND1P05546 499 aa15.85■□□□□ 0.13
SNCA-209ENST00000506244 FAM87AP0C7U9 286 aa15.85■□□□□ 0.13
SNCA-209ENST00000506244 EPB42P16452 691 aa15.85■□□□□ 0.13
SNCA-209ENST00000506244 VARSP26640 1264 aaKnown RBP15.85■□□□□ 0.13
SNCA-209ENST00000506244 GCAP28676 217 aa15.85■□□□□ 0.13
SNCA-209ENST00000506244 KCNC1P48547 511 aa15.85■□□□□ 0.13
SNCA-209ENST00000506244 PIK3CGP48736 1102 aa15.85■□□□□ 0.13
SNCA-209ENST00000506244 VSNL1P62760 191 aa15.85■□□□□ 0.13
SNCA-209ENST00000506244 KCNAB2Q13303 367 aa15.85■□□□□ 0.13
SNCA-209ENST00000506244 COL9A2Q14055 689 aaPredicted RBP15.85■□□□□ 0.13
SNCA-209ENST00000506244 NAA30Q147X3 362 aaPredicted RBP15.85■□□□□ 0.13
SNCA-209ENST00000506244 PFKFB4Q16877 469 aa15.85■□□□□ 0.13
SNCA-209ENST00000506244 SOWAHCQ53LP3 525 aaPredicted RBP15.85■□□□□ 0.13
SNCA-209ENST00000506244 XKR6Q5GH73 641 aa15.85■□□□□ 0.13
SNCA-209ENST00000506244 EMBQ6PCB8 327 aa15.85■□□□□ 0.13
SNCA-209ENST00000506244 PCSK4Q6UW60 755 aa15.85■□□□□ 0.13
SNCA-209ENST00000506244 TMIGD1Q6UXZ0 262 aa15.85■□□□□ 0.13
SNCA-209ENST00000506244 MED25Q71SY5 747 aa15.85■□□□□ 0.13
SNCA-209ENST00000506244 TMEM102Q8N9M5 508 aaPredicted RBP15.85■□□□□ 0.13
SNCA-209ENST00000506244 ZNF740Q8NDX6 193 aa15.85■□□□□ 0.13
SNCA-209ENST00000506244 ACMSDQ8TDX5 336 aa15.85■□□□□ 0.13
SNCA-209ENST00000506244 UBE2E3Q969T4 207 aa15.85■□□□□ 0.13
SNCA-209ENST00000506244 MIEF2Q96C03 454 aa15.85■□□□□ 0.13
SNCA-209ENST00000506244 GPR78Q96P69 363 aa15.85■□□□□ 0.13
SNCA-209ENST00000506244 MRPL57Q9BQC6 102 aaKnown RBP15.85■□□□□ 0.13
SNCA-209ENST00000506244 MRPL46Q9H2W6 279 aaKnown RBP15.85■□□□□ 0.13
SNCA-209ENST00000506244 NT5DC2Q9H857 520 aa15.85■□□□□ 0.13
SNCA-209ENST00000506244 SEMA3GQ9NS98 782 aa15.85■□□□□ 0.13
SNCA-209ENST00000506244 CPSF2Q9P2I0 782 aaKnown RBP15.85■□□□□ 0.13
SNCA-209ENST00000506244 COPG2Q9UBF2 871 aa15.85■□□□□ 0.13
SNCA-209ENST00000506244 XPR1Q9UBH6 696 aa15.85■□□□□ 0.13
SNCA-209ENST00000506244 G3BP2Q9UN86 482 aaKnown RBP15.85■□□□□ 0.13
SNCA-209ENST00000506244 VSTM2BA6NLU5 285 aa15.84■□□□□ 0.13
SNCA-209ENST00000506244 MKRN2OSH3BPM6 223 aa15.84■□□□□ 0.13
SNCA-209ENST00000506244 MAP2K7O14733 419 aa15.84■□□□□ 0.13
SNCA-209ENST00000506244 PCDH17O14917 1159 aa15.84■□□□□ 0.13
SNCA-209ENST00000506244 FOXS1O43638 330 aa15.84■□□□□ 0.13
SNCA-209ENST00000506244 KLK8O60259 260 aa15.84■□□□□ 0.13
SNCA-209ENST00000506244 SERPINA6P08185 405 aa15.84■□□□□ 0.13
SNCA-209ENST00000506244 MTHFD2P13995 350 aa15.84■□□□□ 0.13
SNCA-209ENST00000506244 IL1RNP18510 177 aa15.84■□□□□ 0.13
SNCA-209ENST00000506244 MMP11P24347 488 aa15.84■□□□□ 0.13
SNCA-209ENST00000506244 STXBP1P61764 594 aaKnown RBP15.84■□□□□ 0.13
SNCA-209ENST00000506244 IRF8Q02556 426 aa15.84■□□□□ 0.13
SNCA-209ENST00000506244 LY6DQ14210 128 aa15.84■□□□□ 0.13
SNCA-209ENST00000506244 TBCCQ15814 346 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms