RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 PHACTR4Q8IZ21 702 aa16.6■□□□□ 0.25
TRAPPC11-204ENST00000505676 ST13P5Q8NFI4 369 aaPredicted RBP16.6■□□□□ 0.25
TRAPPC11-204ENST00000505676 OR14C36Q8NHC7 312 aa16.6■□□□□ 0.25
TRAPPC11-204ENST00000505676 GFM2Q969S9 779 aaKnown RBP16.6■□□□□ 0.25
TRAPPC11-204ENST00000505676 SCARF2Q96GP6 870 aaPredicted RBP16.6■□□□□ 0.25
TRAPPC11-204ENST00000505676 SLC6A13Q9NSD5 602 aa16.6■□□□□ 0.25
TRAPPC11-204ENST00000505676 TUBA8Q9NY65 449 aaPredicted RBP16.6■□□□□ 0.25
TRAPPC11-204ENST00000505676 USE1Q9NZ43 259 aa16.6■□□□□ 0.25
TRAPPC11-204ENST00000505676 SERGEFQ9UGK8 458 aa16.6■□□□□ 0.25
TRAPPC11-204ENST00000505676 CIDEBQ9UHD4 219 aa16.6■□□□□ 0.25
TRAPPC11-204ENST00000505676 TDRKHQ9Y2W6 561 aaKnown RBP16.6■□□□□ 0.25
TRAPPC11-204ENST00000505676 A0A1W2PQU0 124 aa16.6■□□□□ 0.25
TRAPPC11-204ENST00000505676 ANKDD1BA6NHY2 528 aa16.6■□□□□ 0.25
TRAPPC11-204ENST00000505676 HOXB2P14652 356 aa16.6■□□□□ 0.25
TRAPPC11-204ENST00000505676 MAGEA2P43356 314 aa16.6■□□□□ 0.25
TRAPPC11-204ENST00000505676 KIAA1024LP59773 190 aa16.6■□□□□ 0.25
TRAPPC11-204ENST00000505676 APOFQ13790 326 aa16.6■□□□□ 0.25
TRAPPC11-204ENST00000505676 DAG1Q14118 895 aa16.6■□□□□ 0.25
TRAPPC11-204ENST00000505676 ELOAQ14241 798 aaKnown RBP16.6■□□□□ 0.25
TRAPPC11-204ENST00000505676 HKDC1Q2TB90 917 aa16.6■□□□□ 0.25
TRAPPC11-204ENST00000505676 TMEM196Q5HYL7 178 aa16.6■□□□□ 0.25
TRAPPC11-204ENST00000505676 SPDYE1Q8NFV5 336 aaPredicted RBP16.6■□□□□ 0.25
TRAPPC11-204ENST00000505676 FBXO30Q8TB52 745 aa16.6■□□□□ 0.25
TRAPPC11-204ENST00000505676 FAM110BQ8TC76 370 aa16.6■□□□□ 0.25
TRAPPC11-204ENST00000505676 SH3KBP1Q96B97 665 aa16.6■□□□□ 0.25
TRAPPC11-204ENST00000505676 RMND5BQ96G75 393 aaPredicted RBP16.6■□□□□ 0.25
TRAPPC11-204ENST00000505676 TPT1P8Q9HAU6 139 aa16.6■□□□□ 0.25
TRAPPC11-204ENST00000505676 ADAM29Q9UKF5 820 aa16.6■□□□□ 0.25
TRAPPC11-204ENST00000505676 PRR19A6NJB7 356 aa16.59■□□□□ 0.25
TRAPPC11-204ENST00000505676 PAK4O96013 591 aaPredicted RBP16.59■□□□□ 0.25
TRAPPC11-204ENST00000505676 CLCNKAP51800 687 aa16.59■□□□□ 0.25
TRAPPC11-204ENST00000505676 ADPRHP54922 357 aa16.59■□□□□ 0.25
TRAPPC11-204ENST00000505676 NR1H2P55055 460 aa16.59■□□□□ 0.25
TRAPPC11-204ENST00000505676 FAM71E1Q6IPT2 247 aa16.59■□□□□ 0.25
TRAPPC11-204ENST00000505676 ARMCX6Q7L4S7 300 aa16.59■□□□□ 0.25
TRAPPC11-204ENST00000505676 GPR156Q8NFN8 814 aa16.59■□□□□ 0.25
TRAPPC11-204ENST00000505676 OR4K1Q8NGD4 311 aa16.59■□□□□ 0.25
TRAPPC11-204ENST00000505676 CDC26Q8NHZ8 85 aa16.59■□□□□ 0.25
TRAPPC11-204ENST00000505676 DNASE1L2Q92874 299 aa16.59■□□□□ 0.25
TRAPPC11-204ENST00000505676 PPCDCQ96CD2 204 aa16.59■□□□□ 0.25
TRAPPC11-204ENST00000505676 MSANTD3Q96H12 275 aa16.59■□□□□ 0.25
TRAPPC11-204ENST00000505676 MENTQ9BUN1 341 aa16.59■□□□□ 0.25
TRAPPC11-204ENST00000505676 C1orf226A1L170 272 aa16.58■□□□□ 0.25
TRAPPC11-204ENST00000505676 DLGAP1O14490 977 aa16.58■□□□□ 0.25
TRAPPC11-204ENST00000505676 PRKD3O94806 890 aa16.58■□□□□ 0.25
TRAPPC11-204ENST00000505676 SERPINA1P01009 418 aa16.58■□□□□ 0.25
TRAPPC11-204ENST00000505676 CST1P01037 141 aa16.58■□□□□ 0.25
TRAPPC11-204ENST00000505676 GSNP06396 782 aa16.58■□□□□ 0.25
TRAPPC11-204ENST00000505676 FURINP09958 794 aa16.58■□□□□ 0.25
TRAPPC11-204ENST00000505676 RAB28P51157 221 aa16.58■□□□□ 0.25
TRAPPC11-204ENST00000505676 ARFIP1P53367 373 aa16.58■□□□□ 0.25
TRAPPC11-204ENST00000505676 ARSFP54793 590 aa16.58■□□□□ 0.25
TRAPPC11-204ENST00000505676 SEC13P55735 322 aa16.58■□□□□ 0.25
TRAPPC11-204ENST00000505676 ABATP80404 500 aa16.58■□□□□ 0.25
TRAPPC11-204ENST00000505676 RBBP4Q09028 425 aa16.58■□□□□ 0.25
TRAPPC11-204ENST00000505676 GRSF1Q12849 480 aaKnown RBP eCLIP16.58■□□□□ 0.25
TRAPPC11-204ENST00000505676 FGL2Q14314 439 aa16.58■□□□□ 0.25
TRAPPC11-204ENST00000505676 RFX4Q33E94 735 aa16.58■□□□□ 0.25
TRAPPC11-204ENST00000505676 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.58■□□□□ 0.25
TRAPPC11-204ENST00000505676 ZZZ3Q8IYH5 903 aa16.58■□□□□ 0.25
TRAPPC11-204ENST00000505676 C16orf78Q8WTQ4 265 aa16.58■□□□□ 0.25
TRAPPC11-204ENST00000505676 AURKBQ96GD4 344 aaPredicted RBP16.58■□□□□ 0.25
TRAPPC11-204ENST00000505676 RBM4BQ9BQ04 359 aaKnown RBP16.58■□□□□ 0.25
TRAPPC11-204ENST00000505676 RPP25Q9BUL9 199 aaKnown RBP16.58■□□□□ 0.25
TRAPPC11-204ENST00000505676 RBM4Q9BWF3 364 aaKnown RBP16.58■□□□□ 0.25
TRAPPC11-204ENST00000505676 BTBD1Q9H0C5 482 aa16.58■□□□□ 0.25
TRAPPC11-204ENST00000505676 CLK4Q9HAZ1 481 aaKnown RBP16.58■□□□□ 0.25
TRAPPC11-204ENST00000505676 SH2B3Q9UQQ2 575 aa16.58■□□□□ 0.25
TRAPPC11-204ENST00000505676 PRKAB1Q9Y478 270 aa16.58■□□□□ 0.25
TRAPPC11-204ENST00000505676 PCYT1BQ9Y5K3 369 aaPredicted RBP16.58■□□□□ 0.25
TRAPPC11-204ENST00000505676 H3BNH8 94 aa16.58■□□□□ 0.24
TRAPPC11-204ENST00000505676 PDLIM1O00151 329 aa16.58■□□□□ 0.24
TRAPPC11-204ENST00000505676 UPK1AO00322 258 aa16.58■□□□□ 0.24
TRAPPC11-204ENST00000505676 MAP3K13O43283 966 aa16.58■□□□□ 0.24
TRAPPC11-204ENST00000505676 KIF1CO43896 1103 aaKnown RBP16.58■□□□□ 0.24
TRAPPC11-204ENST00000505676 DPM1O60762 260 aa16.58■□□□□ 0.24
TRAPPC11-204ENST00000505676 KCNK5O95279 499 aa16.58■□□□□ 0.24
TRAPPC11-204ENST00000505676 CPSF4O95639 269 aaKnown RBP16.58■□□□□ 0.24
TRAPPC11-204ENST00000505676 ALBP02768 609 aa16.58■□□□□ 0.24
TRAPPC11-204ENST00000505676 SOX9P48436 509 aa16.58■□□□□ 0.24
TRAPPC11-204ENST00000505676 FADDQ13158 208 aa16.58■□□□□ 0.24
TRAPPC11-204ENST00000505676 PATL1Q86TB9 770 aaKnown RBP16.58■□□□□ 0.24
TRAPPC11-204ENST00000505676 SLC9B2Q86UD5 537 aa16.58■□□□□ 0.24
TRAPPC11-204ENST00000505676 HIPK1Q86Z02 1210 aa16.58■□□□□ 0.24
TRAPPC11-204ENST00000505676 SLC30A8Q8IWU4 369 aa16.58■□□□□ 0.24
TRAPPC11-204ENST00000505676 IL17RCQ8NAC3 791 aa16.58■□□□□ 0.24
TRAPPC11-204ENST00000505676 OR2L8Q8NGY9 312 aa16.58■□□□□ 0.24
TRAPPC11-204ENST00000505676 OR5K1Q8NHB7 308 aa16.58■□□□□ 0.24
TRAPPC11-204ENST00000505676 EZH1Q92800 747 aaPredicted RBP16.58■□□□□ 0.24
TRAPPC11-204ENST00000505676 TMBIM1Q969X1 311 aa16.58■□□□□ 0.24
TRAPPC11-204ENST00000505676 APOOQ9BUR5 198 aa16.58■□□□□ 0.24
TRAPPC11-204ENST00000505676 ASPSCR1Q9BZE9 553 aa16.58■□□□□ 0.24
TRAPPC11-204ENST00000505676 NTN4Q9HB63 628 aa16.58■□□□□ 0.24
TRAPPC11-204ENST00000505676 SH3BP4Q9P0V3 963 aa16.58■□□□□ 0.24
TRAPPC11-204ENST00000505676 IFT80Q9P2H3 777 aaPredicted RBP16.58■□□□□ 0.24
TRAPPC11-204ENST00000505676 TAC3Q9UHF0 121 aa16.58■□□□□ 0.24
TRAPPC11-204ENST00000505676 OR1A2Q9Y585 309 aa16.58■□□□□ 0.24
TRAPPC11-204ENST00000505676 G3V2T6 193 aa16.57■□□□□ 0.24
TRAPPC11-204ENST00000505676 GNGT2O14610 69 aa16.57■□□□□ 0.24
TRAPPC11-204ENST00000505676 GPR37L1O60883 481 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms