RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 ARHGEF39Q8N4T4 335 aa6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 PPHLN1Q8NEY8 458 aaKnown RBP6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 OR5M3Q8NGP4 307 aa6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 M1APQ8TC57 530 aa6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 MCOLN3Q8TDD5 553 aa6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 ALG3Q92685 438 aa6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 RND1Q92730 232 aa6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 TMEM125Q96AQ2 219 aa6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 PEX11GQ96HA9 241 aa6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 MRFAP1L1Q96HT8 127 aa6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 SEC16BQ96JE7 1060 aa6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 PKP4Q99569 1192 aa6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 FOXC2Q99958 501 aa6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 POLDIP3Q9BY77 421 aaKnown RBP6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 LIME1Q9H400 295 aa6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 MMP25Q9NPA2 562 aa6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 TCAF1Q9Y4C2 921 aa6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 PCDHA3Q9Y5H8 950 aa6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 HRH3Q9Y5N1 445 aa6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 ZFHX3Q15911 3703 aa6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 GTF3C1Q12789 2109 aa6.47□□□□□ -1.37
NPIPB3-203ENST00000504841 H7BY64 318 aa6.47□□□□□ -1.37
NPIPB3-203ENST00000504841 CD3EAPO15446 510 aaKnown RBP6.47□□□□□ -1.37
NPIPB3-203ENST00000504841 CBFA2T2O43439 604 aa6.47□□□□□ -1.37
NPIPB3-203ENST00000504841 PRMT3O60678 531 aa6.47□□□□□ -1.37
NPIPB3-203ENST00000504841 ZNF189O75820 626 aaPredicted RBP6.47□□□□□ -1.37
NPIPB3-203ENST00000504841 NSA2O95478 260 aaKnown RBP6.47□□□□□ -1.37
NPIPB3-203ENST00000504841 IFNB1P01574 187 aa6.47□□□□□ -1.37
NPIPB3-203ENST00000504841 HOXD4P09016 255 aaPredicted RBP6.47□□□□□ -1.37
NPIPB3-203ENST00000504841 ERGP11308 486 aa6.47□□□□□ -1.37
NPIPB3-203ENST00000504841 TFEBP19484 476 aa6.47□□□□□ -1.37
NPIPB3-203ENST00000504841 CHRM3P20309 590 aa6.47□□□□□ -1.37
NPIPB3-203ENST00000504841 FMO4P31512 558 aa6.47□□□□□ -1.37
NPIPB3-203ENST00000504841 BCL6P41182 706 aa6.47□□□□□ -1.37
NPIPB3-203ENST00000504841 CYB561P49447 251 aa6.47□□□□□ -1.37
NPIPB3-203ENST00000504841 PNLIPRP1P54315 467 aa6.47□□□□□ -1.37
NPIPB3-203ENST00000504841 NUP107P57740 925 aa6.47□□□□□ -1.37
NPIPB3-203ENST00000504841 OR4D2P58180 307 aa6.47□□□□□ -1.37
NPIPB3-203ENST00000504841 SLC26A5P58743 744 aa6.47□□□□□ -1.37
NPIPB3-203ENST00000504841 OLR1P78380 273 aa6.47□□□□□ -1.37
NPIPB3-203ENST00000504841 CRADDP78560 199 aa6.47□□□□□ -1.37
NPIPB3-203ENST00000504841 ACVR1Q04771 509 aa6.47□□□□□ -1.37
NPIPB3-203ENST00000504841 PRDX1Q06830 199 aaKnown RBP6.47□□□□□ -1.37
NPIPB3-203ENST00000504841 TFF3Q07654 80 aa6.47□□□□□ -1.37
NPIPB3-203ENST00000504841 PTK6Q13882 451 aa6.47□□□□□ -1.37
NPIPB3-203ENST00000504841 USP10Q14694 798 aaKnown RBP6.47□□□□□ -1.37
NPIPB3-203ENST00000504841 KLHL38Q2WGJ6 581 aa6.47□□□□□ -1.37
NPIPB3-203ENST00000504841 ACSBG2Q5FVE4 666 aa6.47□□□□□ -1.37
NPIPB3-203ENST00000504841 TAOK1Q7L7X3 1001 aa6.47□□□□□ -1.37
NPIPB3-203ENST00000504841 PRUNE1Q86TP1 453 aa6.47□□□□□ -1.37
NPIPB3-203ENST00000504841 RPS19BP1Q86WX3 136 aaKnown RBP6.47□□□□□ -1.37
NPIPB3-203ENST00000504841 ZZZ3Q8IYH5 903 aa6.47□□□□□ -1.37
NPIPB3-203ENST00000504841 CLYBLQ8N0X4 340 aa6.47□□□□□ -1.37
NPIPB3-203ENST00000504841 OR10Q1Q8NGQ4 319 aa6.47□□□□□ -1.37
NPIPB3-203ENST00000504841 LILRB4Q8NHJ6 448 aa6.47□□□□□ -1.37
NPIPB3-203ENST00000504841 ZNF480Q8WV37 535 aa6.47□□□□□ -1.37
NPIPB3-203ENST00000504841 ATG4AQ8WYN0 398 aa6.47□□□□□ -1.37
NPIPB3-203ENST00000504841 PRAP1Q96NZ9 151 aa6.47□□□□□ -1.37
NPIPB3-203ENST00000504841 OLFM1Q99784 485 aa6.47□□□□□ -1.37
NPIPB3-203ENST00000504841 GPATCH1Q9BRR8 931 aaKnown RBP6.47□□□□□ -1.37
NPIPB3-203ENST00000504841 P2RY12Q9H244 342 aa6.47□□□□□ -1.37
NPIPB3-203ENST00000504841 TP63Q9H3D4 680 aaPredicted RBP6.47□□□□□ -1.37
NPIPB3-203ENST00000504841 ETNK1Q9HBU6 452 aa6.47□□□□□ -1.37
NPIPB3-203ENST00000504841 ANKHQ9HCJ1 492 aa6.47□□□□□ -1.37
NPIPB3-203ENST00000504841 FAM114A2Q9NRY5 505 aa6.47□□□□□ -1.37
NPIPB3-203ENST00000504841 KCNN3Q9UGI6 736 aa6.47□□□□□ -1.37
NPIPB3-203ENST00000504841 EFR3BQ9Y2G0 817 aa6.47□□□□□ -1.37
NPIPB3-203ENST00000504841 PCDHA13Q9Y5I0 950 aa6.47□□□□□ -1.37
NPIPB3-203ENST00000504841 HCFC1P51610 2035 aa6.47□□□□□ -1.37
NPIPB3-203ENST00000504841 AKAP9Q99996 3911 aa6.46□□□□□ -1.37
NPIPB3-203ENST00000504841 SPG11Q96JI7 2443 aa6.46□□□□□ -1.38
NPIPB3-203ENST00000504841 ABCA2Q9BZC7 2435 aa6.46□□□□□ -1.38
NPIPB3-203ENST00000504841 FAM237BA0A1B0GVD1 139 aa6.46□□□□□ -1.38
NPIPB3-203ENST00000504841 TCRBV7S2A1N4TA0A589 114 aa6.46□□□□□ -1.38
NPIPB3-203ENST00000504841 FAM221AA4D161 298 aa6.46□□□□□ -1.38
NPIPB3-203ENST00000504841 ZNF839A8K0R7 811 aa6.46□□□□□ -1.38
NPIPB3-203ENST00000504841 FAM166BA8MTA8 275 aa6.46□□□□□ -1.38
NPIPB3-203ENST00000504841 A8MUA0 341 aa6.46□□□□□ -1.38
NPIPB3-203ENST00000504841 AKR1B15C9JRZ8 316 aaPredicted RBP6.46□□□□□ -1.38
NPIPB3-203ENST00000504841 GOLGA8KD6RF30 607 aa6.46□□□□□ -1.38
NPIPB3-203ENST00000504841 E5RI56 91 aa6.46□□□□□ -1.38
NPIPB3-203ENST00000504841 NPIPA2E9PIF3 369 aa6.46□□□□□ -1.38
NPIPB3-203ENST00000504841 NPIPA3F8WFD2 350 aa6.46□□□□□ -1.38
NPIPB3-203ENST00000504841 GOLGA8TH3BQL2 631 aa6.46□□□□□ -1.38
NPIPB3-203ENST00000504841 MYO1CO00159 1063 aa6.46□□□□□ -1.38
NPIPB3-203ENST00000504841 FCHO1O14526 889 aa6.46□□□□□ -1.38
NPIPB3-203ENST00000504841 SLC16A5O15375 505 aa6.46□□□□□ -1.38
NPIPB3-203ENST00000504841 PEX1O43933 1283 aa6.46□□□□□ -1.38
NPIPB3-203ENST00000504841 KLK8O60259 260 aa6.46□□□□□ -1.38
NPIPB3-203ENST00000504841 FAM155BO75949 473 aa6.46□□□□□ -1.38
NPIPB3-203ENST00000504841 MATN4O95460 622 aa6.46□□□□□ -1.38
NPIPB3-203ENST00000504841 SLC16A8O95907 504 aa6.46□□□□□ -1.38
NPIPB3-203ENST00000504841 CATP04040 527 aaKnown RBP6.46□□□□□ -1.38
NPIPB3-203ENST00000504841 APRTP07741 180 aa6.46□□□□□ -1.38
NPIPB3-203ENST00000504841 CYC1P08574 325 aa6.46□□□□□ -1.38
NPIPB3-203ENST00000504841 RPS3P23396 243 aaKnown RBP eCLIP6.46□□□□□ -1.38
NPIPB3-203ENST00000504841 DNASE1P24855 282 aa6.46□□□□□ -1.38
NPIPB3-203ENST00000504841 NMBRP28336 390 aa6.46□□□□□ -1.38
NPIPB3-203ENST00000504841 COILP38432 576 aaPredicted RBP6.46□□□□□ -1.38
NPIPB3-203ENST00000504841 NR0B1P51843 470 aaKnown RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms