RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 CATSPERZQ9NTU4 200 aa8.57□□□□□ -1.04
DHFR-202ENST00000504396 UTP6Q9NYH9 597 aaKnown RBP8.57□□□□□ -1.04
DHFR-202ENST00000504396 SPATA7Q9P0W8 599 aa8.57□□□□□ -1.04
DHFR-202ENST00000504396 GNPTGQ9UJJ9 305 aa8.57□□□□□ -1.04
DHFR-202ENST00000504396 FOXD3Q9UJU5 478 aaPredicted RBP8.57□□□□□ -1.04
DHFR-202ENST00000504396 R3HDM2Q9Y2K5 976 aaKnown RBP8.57□□□□□ -1.04
DHFR-202ENST00000504396 MEMO1Q9Y316 297 aa8.57□□□□□ -1.04
DHFR-202ENST00000504396 PCDHGB6Q9Y5F9 930 aa8.57□□□□□ -1.04
DHFR-202ENST00000504396 PCDHA13Q9Y5I0 950 aa8.57□□□□□ -1.04
DHFR-202ENST00000504396 NCOA6Q14686 2063 aaPredicted RBP8.57□□□□□ -1.04
DHFR-202ENST00000504396 LOC102723996A0A087X1L8 192 aa8.56□□□□□ -1.04
DHFR-202ENST00000504396 A0A0U1RQJ8 604 aa8.56□□□□□ -1.04
DHFR-202ENST00000504396 OR2A25A4D2G3 310 aa8.56□□□□□ -1.04
DHFR-202ENST00000504396 BTNL10A8MVZ5 291 aa8.56□□□□□ -1.04
DHFR-202ENST00000504396 TXNDC9O14530 226 aa8.56□□□□□ -1.04
DHFR-202ENST00000504396 PRMT5O14744 637 aaPredicted RBP8.56□□□□□ -1.04
DHFR-202ENST00000504396 ICMTO60725 284 aa8.56□□□□□ -1.04
DHFR-202ENST00000504396 WISP2O76076 250 aa8.56□□□□□ -1.04
DHFR-202ENST00000504396 C1orf105O95561 183 aa8.56□□□□□ -1.04
DHFR-202ENST00000504396 STATHP02808 62 aa8.56□□□□□ -1.04
DHFR-202ENST00000504396 ADRA1DP25100 572 aa8.56□□□□□ -1.04
DHFR-202ENST00000504396 CYLC1P35663 651 aaPredicted RBP8.56□□□□□ -1.04
DHFR-202ENST00000504396 TTPAP49638 278 aa8.56□□□□□ -1.04
DHFR-202ENST00000504396 EIF3BP55884 814 aaKnown RBP8.56□□□□□ -1.04
DHFR-202ENST00000504396 YBX1P67809 324 aaKnown RBP8.56□□□□□ -1.04
DHFR-202ENST00000504396 GABPB1Q06547 395 aaPredicted RBP8.56□□□□□ -1.04
DHFR-202ENST00000504396 FASTKQ14296 549 aaKnown RBP8.56□□□□□ -1.04
DHFR-202ENST00000504396 OR1C1Q15619 314 aa8.56□□□□□ -1.04
DHFR-202ENST00000504396 PRTGQ2VWP7 1150 aa8.56□□□□□ -1.04
DHFR-202ENST00000504396 LRRC8BQ6P9F7 803 aa8.56□□□□□ -1.04
DHFR-202ENST00000504396 SUSD1Q6UWL2 747 aa8.56□□□□□ -1.04
DHFR-202ENST00000504396 LRRC6Q86X45 466 aa8.56□□□□□ -1.04
DHFR-202ENST00000504396 ZC3H7AQ8IWR0 971 aaKnown RBP8.56□□□□□ -1.04
DHFR-202ENST00000504396 MPP5Q8N3R9 675 aa8.56□□□□□ -1.04
DHFR-202ENST00000504396 AMER3Q8N944 861 aa8.56□□□□□ -1.04
DHFR-202ENST00000504396 PPHLN1Q8NEY8 458 aaKnown RBP8.56□□□□□ -1.04
DHFR-202ENST00000504396 OR2A1Q8NGT9 310 aa8.56□□□□□ -1.04
DHFR-202ENST00000504396 AGAP11Q8TF27 550 aa8.56□□□□□ -1.04
DHFR-202ENST00000504396 TP53INP1Q96A56 240 aa8.56□□□□□ -1.04
DHFR-202ENST00000504396 FAM136AQ96C01 138 aa8.56□□□□□ -1.04
DHFR-202ENST00000504396 SDCCAG3Q96C92 435 aa8.56□□□□□ -1.04
DHFR-202ENST00000504396 C14orf79Q96F83 325 aa8.56□□□□□ -1.04
DHFR-202ENST00000504396 ZNF354BQ96LW1 612 aa8.56□□□□□ -1.04
DHFR-202ENST00000504396 UTP23Q9BRU9 249 aaKnown RBP8.56□□□□□ -1.04
DHFR-202ENST00000504396 SSBP4Q9BWG4 385 aaPredicted RBP8.56□□□□□ -1.04
DHFR-202ENST00000504396 HES7Q9BYE0 225 aa8.56□□□□□ -1.04
DHFR-202ENST00000504396 MCCC2Q9HCC0 563 aa8.56□□□□□ -1.04
DHFR-202ENST00000504396 COQ3Q9NZJ6 369 aa8.56□□□□□ -1.04
DHFR-202ENST00000504396 C19orf25Q9UFG5 118 aaPredicted RBP8.56□□□□□ -1.04
DHFR-202ENST00000504396 TAC3Q9UHF0 121 aa8.56□□□□□ -1.04
DHFR-202ENST00000504396 PCYOX1Q9UHG3 505 aa8.56□□□□□ -1.04
DHFR-202ENST00000504396 PPT2Q9UMR5 302 aa8.56□□□□□ -1.04
DHFR-202ENST00000504396 HEATR5BQ9P2D3 2071 aa8.56□□□□□ -1.04
DHFR-202ENST00000504396 EREGO14944 169 aa8.55□□□□□ -1.04
DHFR-202ENST00000504396 ZNHIT1O43257 154 aa8.55□□□□□ -1.04
DHFR-202ENST00000504396 NDUFS3O75489 264 aa8.55□□□□□ -1.04
DHFR-202ENST00000504396 SUN1O94901 812 aa8.55□□□□□ -1.04
DHFR-202ENST00000504396 ALX3O95076 343 aa8.55□□□□□ -1.04
DHFR-202ENST00000504396 IPO7O95373 1038 aaKnown RBP8.55□□□□□ -1.04
DHFR-202ENST00000504396 TSPAN12O95859 305 aa8.55□□□□□ -1.04
DHFR-202ENST00000504396 IFNB1P01574 187 aa8.55□□□□□ -1.04
DHFR-202ENST00000504396 EPHA1P21709 976 aa8.55□□□□□ -1.04
DHFR-202ENST00000504396 ATP5DP30049 168 aa8.55□□□□□ -1.04
DHFR-202ENST00000504396 STIP1P31948 543 aaKnown RBP8.55□□□□□ -1.04
DHFR-202ENST00000504396 FDFT1P37268 417 aa8.55□□□□□ -1.04
DHFR-202ENST00000504396 SLC26A3P40879 764 aa8.55□□□□□ -1.04
DHFR-202ENST00000504396 AVPR1BP47901 424 aa8.55□□□□□ -1.04
DHFR-202ENST00000504396 CSNK1G2P78368 415 aa8.55□□□□□ -1.04
DHFR-202ENST00000504396 HSF1Q00613 529 aa8.55□□□□□ -1.04
DHFR-202ENST00000504396 RELAQ04206 551 aa8.55□□□□□ -1.04
DHFR-202ENST00000504396 TBX2Q13207 712 aaPredicted RBP8.55□□□□□ -1.04
DHFR-202ENST00000504396 TUBA3CQ13748 450 aa8.55□□□□□ -1.04
DHFR-202ENST00000504396 NDUFA9Q16795 377 aa8.55□□□□□ -1.04
DHFR-202ENST00000504396 KRTCAP3Q53RY4 240 aa8.55□□□□□ -1.04
DHFR-202ENST00000504396 ACER2Q5QJU3 275 aa8.55□□□□□ -1.04
DHFR-202ENST00000504396 THEMIS2Q5TEJ8 643 aa8.55□□□□□ -1.04
DHFR-202ENST00000504396 FBXO42Q6P3S6 717 aa8.55□□□□□ -1.04
DHFR-202ENST00000504396 TUBA3EQ6PEY2 450 aa8.55□□□□□ -1.04
DHFR-202ENST00000504396 SPNS3Q6ZMD2 512 aa8.55□□□□□ -1.04
DHFR-202ENST00000504396 LANCL3Q6ZV70 420 aa8.55□□□□□ -1.04
DHFR-202ENST00000504396 ZNF534Q76KX8 674 aa8.55□□□□□ -1.04
DHFR-202ENST00000504396 CPEB2Q7Z5Q1 589 aaKnown RBP8.55□□□□□ -1.04
DHFR-202ENST00000504396 TMEM200AQ86VY9 491 aa8.55□□□□□ -1.04
DHFR-202ENST00000504396 EID3Q8N140 333 aa8.55□□□□□ -1.04
DHFR-202ENST00000504396 TMEM178AQ8NBL3 297 aa8.55□□□□□ -1.04
DHFR-202ENST00000504396 ADAMTS18Q8TE60 1221 aa8.55□□□□□ -1.04
DHFR-202ENST00000504396 THAP3Q8WTV1 239 aaPredicted RBP8.55□□□□□ -1.04
DHFR-202ENST00000504396 ZNF778Q96MU6 729 aa8.55□□□□□ -1.04
DHFR-202ENST00000504396 SIGLEC12Q96PQ1 595 aa8.55□□□□□ -1.04
DHFR-202ENST00000504396 PLCD4Q9BRC7 762 aa8.55□□□□□ -1.04
DHFR-202ENST00000504396 EGFL7Q9UHF1 273 aa8.55□□□□□ -1.04
DHFR-202ENST00000504396 SCN2AQ99250 2005 aa8.55□□□□□ -1.04
DHFR-202ENST00000504396 PCNX1Q96RV3 2341 aa8.55□□□□□ -1.04
DHFR-202ENST00000504396 CACNA1CQ13936 2221 aa8.55□□□□□ -1.04
DHFR-202ENST00000504396 MED13LQ71F56 2210 aa8.55□□□□□ -1.04
DHFR-202ENST00000504396 A0A1W2PPV9 198 aa8.54□□□□□ -1.04
DHFR-202ENST00000504396 ZNF839A8K0R7 811 aa8.54□□□□□ -1.04
DHFR-202ENST00000504396 GABRR3A8MPY1 467 aa8.54□□□□□ -1.04
DHFR-202ENST00000504396 MIF4GDA9UHW6 222 aaKnown RBP8.54□□□□□ -1.04
DHFR-202ENST00000504396 PRRG2O14669 202 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms