RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 VWA5B1Q5TIE3 1220 aa19.5■□□□□ 0.71
CDC42SE2-206ENST00000503291 TRIM46Q7Z4K8 759 aa19.5■□□□□ 0.71
CDC42SE2-206ENST00000503291 VN1R4Q7Z5H5 301 aa19.5■□□□□ 0.71
CDC42SE2-206ENST00000503291 CPLX4Q7Z7G2 160 aa19.5■□□□□ 0.71
CDC42SE2-206ENST00000503291 TRPV3Q8NET8 790 aa19.5■□□□□ 0.71
CDC42SE2-206ENST00000503291 CCT6BQ92526 530 aa19.5■□□□□ 0.71
CDC42SE2-206ENST00000503291 THAP11Q96EK4 314 aa19.5■□□□□ 0.71
CDC42SE2-206ENST00000503291 RABEP2Q9H5N1 569 aa19.5■□□□□ 0.71
CDC42SE2-206ENST00000503291 ADGRE2Q9UHX3 823 aa19.5■□□□□ 0.71
CDC42SE2-206ENST00000503291 CFAP54Q96N23 3096 aa19.5■□□□□ 0.71
CDC42SE2-206ENST00000503291 CEP250Q9BV73 2442 aa19.5■□□□□ 0.71
CDC42SE2-206ENST00000503291 H0YGG7 62 aa19.49■□□□□ 0.71
CDC42SE2-206ENST00000503291 AGRPO00253 132 aa19.49■□□□□ 0.71
CDC42SE2-206ENST00000503291 FOXE1O00358 373 aaPredicted RBP19.49■□□□□ 0.71
CDC42SE2-206ENST00000503291 TGFB1P01137 390 aa19.49■□□□□ 0.71
CDC42SE2-206ENST00000503291 STATHP02808 62 aa19.49■□□□□ 0.71
CDC42SE2-206ENST00000503291 SERPIND1P05546 499 aa19.49■□□□□ 0.71
CDC42SE2-206ENST00000503291 GSTM2P28161 218 aa19.49■□□□□ 0.71
CDC42SE2-206ENST00000503291 INHBCP55103 352 aa19.49■□□□□ 0.71
CDC42SE2-206ENST00000503291 ARF3P61204 181 aaPredicted RBP19.49■□□□□ 0.71
CDC42SE2-206ENST00000503291 CREB3L4Q8TEY5 395 aa19.49■□□□□ 0.71
CDC42SE2-206ENST00000503291 SLC13A3Q8WWT9 602 aa19.49■□□□□ 0.71
CDC42SE2-206ENST00000503291 RERGQ96A58 199 aaPredicted RBP19.49■□□□□ 0.71
CDC42SE2-206ENST00000503291 C19orf60Q96EN9 201 aa19.49■□□□□ 0.71
CDC42SE2-206ENST00000503291 SEC16BQ96JE7 1060 aa19.49■□□□□ 0.71
CDC42SE2-206ENST00000503291 C3orf30Q96M34 536 aa19.49■□□□□ 0.71
CDC42SE2-206ENST00000503291 TMEM74Q96NL1 305 aa19.49■□□□□ 0.71
CDC42SE2-206ENST00000503291 CCT7Q99832 543 aa19.49■□□□□ 0.71
CDC42SE2-206ENST00000503291 MACROD1Q9BQ69 325 aa19.49■□□□□ 0.71
CDC42SE2-206ENST00000503291 DMRT3Q9NQL9 472 aa19.49■□□□□ 0.71
CDC42SE2-206ENST00000503291 DCTN4Q9UJW0 460 aa19.49■□□□□ 0.71
CDC42SE2-206ENST00000503291 PLCL2Q9UPR0 1127 aa19.49■□□□□ 0.71
CDC42SE2-206ENST00000503291 SRRM3A6NNA2 597 aaPredicted RBP19.49■□□□□ 0.71
CDC42SE2-206ENST00000503291 CLEC3AO75596 197 aa19.49■□□□□ 0.71
CDC42SE2-206ENST00000503291 DKK1O94907 266 aa19.49■□□□□ 0.71
CDC42SE2-206ENST00000503291 TBX6O95947 436 aaPredicted RBP19.49■□□□□ 0.71
CDC42SE2-206ENST00000503291 FTH1P19P0C7X4 201 aa19.49■□□□□ 0.71
CDC42SE2-206ENST00000503291 TROVE2P10155 538 aaKnown RBP eCLIP19.49■□□□□ 0.71
CDC42SE2-206ENST00000503291 FOLR1P15328 257 aa19.49■□□□□ 0.71
CDC42SE2-206ENST00000503291 ALOX15P16050 662 aaPredicted RBP19.49■□□□□ 0.71
CDC42SE2-206ENST00000503291 SERPINB1P30740 379 aa19.49■□□□□ 0.71
CDC42SE2-206ENST00000503291 AQP5P55064 265 aa19.49■□□□□ 0.71
CDC42SE2-206ENST00000503291 CLDN6P56747 220 aa19.49■□□□□ 0.71
CDC42SE2-206ENST00000503291 RPS13P62277 151 aaKnown RBP19.49■□□□□ 0.71
CDC42SE2-206ENST00000503291 TMTC4Q5T4D3 741 aa19.49■□□□□ 0.71
CDC42SE2-206ENST00000503291 CDCP2Q5VXM1 449 aa19.49■□□□□ 0.71
CDC42SE2-206ENST00000503291 RNF165Q6ZSG1 346 aa19.49■□□□□ 0.71
CDC42SE2-206ENST00000503291 RFWD2Q8NHY2 731 aa19.49■□□□□ 0.71
CDC42SE2-206ENST00000503291 BRF2Q9HAW0 419 aa19.49■□□□□ 0.71
CDC42SE2-206ENST00000503291 PFDN4Q9NQP4 134 aa19.49■□□□□ 0.71
CDC42SE2-206ENST00000503291 ATP6AP2A0A1C7CYW4 349 aa19.48■□□□□ 0.71
CDC42SE2-206ENST00000503291 SERTM1A2A2V5 107 aa19.48■□□□□ 0.71
CDC42SE2-206ENST00000503291 TRPC5OSA6NMA1 111 aa19.48■□□□□ 0.71
CDC42SE2-206ENST00000503291 NDUFS4O43181 175 aa19.48■□□□□ 0.71
CDC42SE2-206ENST00000503291 SRPX2O60687 465 aaPredicted RBP19.48■□□□□ 0.71
CDC42SE2-206ENST00000503291 SH3BGRLO75368 114 aa19.48■□□□□ 0.71
CDC42SE2-206ENST00000503291 ATP6AP2O75787 350 aa19.48■□□□□ 0.71
CDC42SE2-206ENST00000503291 EIF2S1P05198 315 aaKnown RBP19.48■□□□□ 0.71
CDC42SE2-206ENST00000503291 NOVA1P51513 510 aaKnown RBP19.48■□□□□ 0.71
CDC42SE2-206ENST00000503291 VSX2P58304 361 aaPredicted RBP19.48■□□□□ 0.71
CDC42SE2-206ENST00000503291 PHEXP78562 749 aa19.48■□□□□ 0.71
CDC42SE2-206ENST00000503291 Q6ZSR9 355 aa19.48■□□□□ 0.71
CDC42SE2-206ENST00000503291 ASPGQ86U10 573 aa19.48■□□□□ 0.71
CDC42SE2-206ENST00000503291 COL27A1Q8IZC6 1860 aaPredicted RBP19.48■□□□□ 0.71
CDC42SE2-206ENST00000503291 TM4SF19Q96DZ7 209 aa19.48■□□□□ 0.71
CDC42SE2-206ENST00000503291 ACPTQ9BZG2 426 aa19.48■□□□□ 0.71
CDC42SE2-206ENST00000503291 NSRP1Q9H0G5 558 aaKnown RBP19.48■□□□□ 0.71
CDC42SE2-206ENST00000503291 MEAF6Q9HAF1 191 aa19.48■□□□□ 0.71
CDC42SE2-206ENST00000503291 APOBEC2Q9Y235 224 aaKnown RBP19.48■□□□□ 0.71
CDC42SE2-206ENST00000503291 CCL27Q9Y4X3 112 aa19.48■□□□□ 0.71
CDC42SE2-206ENST00000503291 ETHE1O95571 254 aa19.47■□□□□ 0.71
CDC42SE2-206ENST00000503291 CTSBP07858 339 aa19.47■□□□□ 0.71
CDC42SE2-206ENST00000503291 CCKBRP32239 447 aa19.47■□□□□ 0.71
CDC42SE2-206ENST00000503291 HMGCS1Q01581 520 aa19.47■□□□□ 0.71
CDC42SE2-206ENST00000503291 C16orf72Q14CZ0 275 aa19.47■□□□□ 0.71
CDC42SE2-206ENST00000503291 GPR19Q15760 415 aa19.47■□□□□ 0.71
CDC42SE2-206ENST00000503291 EPGNQ6UW88 154 aa19.47■□□□□ 0.71
CDC42SE2-206ENST00000503291 GBP7Q8N8V2 638 aaPredicted RBP19.47■□□□□ 0.71
CDC42SE2-206ENST00000503291 OR2T11Q8NH01 316 aa19.47■□□□□ 0.71
CDC42SE2-206ENST00000503291 N4BP2L2Q92802 583 aaPredicted RBP19.47■□□□□ 0.71
CDC42SE2-206ENST00000503291 ELAC2Q9BQ52 826 aaKnown RBP19.47■□□□□ 0.71
CDC42SE2-206ENST00000503291 KCNK13Q9HB14 408 aa19.47■□□□□ 0.71
CDC42SE2-206ENST00000503291 SLC28A1O00337 649 aa19.47■□□□□ 0.71
CDC42SE2-206ENST00000503291 HSD3B1P14060 373 aa19.47■□□□□ 0.71
CDC42SE2-206ENST00000503291 PTX3P26022 381 aaPredicted RBP19.47■□□□□ 0.71
CDC42SE2-206ENST00000503291 HSD3B2P26439 372 aa19.47■□□□□ 0.71
CDC42SE2-206ENST00000503291 CSTF2P33240 577 aaKnown RBP eCLIP19.47■□□□□ 0.71
CDC42SE2-206ENST00000503291 CBX1P83916 185 aa19.47■□□□□ 0.71
CDC42SE2-206ENST00000503291 CSTF3Q12996 717 aaKnown RBP19.47■□□□□ 0.71
CDC42SE2-206ENST00000503291 PWP1Q13610 501 aa19.47■□□□□ 0.71
CDC42SE2-206ENST00000503291 IMPG1Q17R60 797 aa19.47■□□□□ 0.71
CDC42SE2-206ENST00000503291 XKR7Q5GH72 579 aa19.47■□□□□ 0.71
CDC42SE2-206ENST00000503291 WASHC2DQ5SRD0 308 aa19.47■□□□□ 0.71
CDC42SE2-206ENST00000503291 CCT8L2Q96SF2 557 aa19.47■□□□□ 0.71
CDC42SE2-206ENST00000503291 MS4A8Q9BY19 250 aa19.47■□□□□ 0.71
CDC42SE2-206ENST00000503291 OR51B5Q9H339 312 aa19.47■□□□□ 0.71
CDC42SE2-206ENST00000503291 WDR55Q9H6Y2 383 aaPredicted RBP19.47■□□□□ 0.71
CDC42SE2-206ENST00000503291 PSD3Q9NYI0 1048 aa19.47■□□□□ 0.71
CDC42SE2-206ENST00000503291 PPT2Q9UMR5 302 aa19.47■□□□□ 0.71
CDC42SE2-206ENST00000503291 SLC12A4Q9UP95 1085 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms