RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 TRIP12Q14669 1992 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P3-201ENST00000502802 CFAP43Q8NDM7 1665 aa4.83□□□□□ -1.64
HMGB1P3-201ENST00000502802 MYH14Q7Z406 1995 aaKnown RBP4.82□□□□□ -1.64
HMGB1P3-201ENST00000502802 NPHP3Q7Z494 1330 aa4.82□□□□□ -1.64
HMGB1P3-201ENST00000502802 IGLV9-49A0A0B4J1Y8 123 aa4.82□□□□□ -1.64
HMGB1P3-201ENST00000502802 TLR4O00206 839 aa4.82□□□□□ -1.64
HMGB1P3-201ENST00000502802 PRKNO60260 465 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P3-201ENST00000502802 HSF2BPO75031 334 aa4.82□□□□□ -1.64
HMGB1P3-201ENST00000502802 KRT3P12035 628 aa4.82□□□□□ -1.64
HMGB1P3-201ENST00000502802 DARSP14868 501 aaKnown RBP4.82□□□□□ -1.64
HMGB1P3-201ENST00000502802 FERP16591 822 aa4.82□□□□□ -1.64
HMGB1P3-201ENST00000502802 LHCGRP22888 699 aa4.82□□□□□ -1.64
HMGB1P3-201ENST00000502802 HPDP32754 393 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P3-201ENST00000502802 RABIFP47224 123 aa4.82□□□□□ -1.64
HMGB1P3-201ENST00000502802 OR3A3P47888 321 aa4.82□□□□□ -1.64
HMGB1P3-201ENST00000502802 GAS1P54826 345 aa4.82□□□□□ -1.64
HMGB1P3-201ENST00000502802 FKBP1BP68106 108 aa4.82□□□□□ -1.64
HMGB1P3-201ENST00000502802 GALK2Q01415 458 aa4.82□□□□□ -1.64
HMGB1P3-201ENST00000502802 GCNT1Q02742 428 aa4.82□□□□□ -1.64
HMGB1P3-201ENST00000502802 LCP2Q13094 533 aa4.82□□□□□ -1.64
HMGB1P3-201ENST00000502802 TSTA3Q13630 321 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P3-201ENST00000502802 BTN2A1Q7KYR7 527 aa4.82□□□□□ -1.64
HMGB1P3-201ENST00000502802 MARK2Q7KZI7 788 aaKnown RBP4.82□□□□□ -1.64
HMGB1P3-201ENST00000502802 CCDC60Q8IWA6 550 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P3-201ENST00000502802 RCOR2Q8IZ40 523 aa4.82□□□□□ -1.64
HMGB1P3-201ENST00000502802 TDHQ8IZJ6 230 aa4.82□□□□□ -1.64
HMGB1P3-201ENST00000502802 THEM5Q8N1Q8 247 aa4.82□□□□□ -1.64
HMGB1P3-201ENST00000502802 CNNM3Q8NE01 707 aa4.82□□□□□ -1.64
HMGB1P3-201ENST00000502802 OR52E1Q8NGJ3 308 aa4.82□□□□□ -1.64
HMGB1P3-201ENST00000502802 SAP25Q8TEE9 199 aa4.82□□□□□ -1.64
HMGB1P3-201ENST00000502802 METTL21AQ8WXB1 218 aa4.82□□□□□ -1.64
HMGB1P3-201ENST00000502802 GGHQ92820 318 aa4.82□□□□□ -1.64
HMGB1P3-201ENST00000502802 RFT1Q96AA3 541 aa4.82□□□□□ -1.64
HMGB1P3-201ENST00000502802 TMEM186Q96B77 213 aa4.82□□□□□ -1.64
HMGB1P3-201ENST00000502802 DTD2Q96FN9 168 aa4.82□□□□□ -1.64
HMGB1P3-201ENST00000502802 MED30Q96HR3 178 aa4.82□□□□□ -1.64
HMGB1P3-201ENST00000502802 RBM41Q96IZ5 413 aaKnown RBP4.82□□□□□ -1.64
HMGB1P3-201ENST00000502802 ST6GAL2Q96JF0 529 aa4.82□□□□□ -1.64
HMGB1P3-201ENST00000502802 CDCA3Q99618 268 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P3-201ENST00000502802 PSD2Q9BQI7 771 aa4.82□□□□□ -1.64
HMGB1P3-201ENST00000502802 RHNO1Q9BSD3 238 aa4.82□□□□□ -1.64
HMGB1P3-201ENST00000502802 C1QTNF4Q9BXJ3 329 aa4.82□□□□□ -1.64
HMGB1P3-201ENST00000502802 TFB2MQ9H5Q4 396 aaKnown RBP4.82□□□□□ -1.64
HMGB1P3-201ENST00000502802 DDX31Q9H8H2 851 aaKnown RBP4.82□□□□□ -1.64
HMGB1P3-201ENST00000502802 ACTR3BQ9P1U1 418 aa4.82□□□□□ -1.64
HMGB1P3-201ENST00000502802 RNF7Q9UBF6 113 aa4.82□□□□□ -1.64
HMGB1P3-201ENST00000502802 UBQLN2Q9UHD9 624 aa4.82□□□□□ -1.64
HMGB1P3-201ENST00000502802 CCPG1Q9ULG6 757 aa4.82□□□□□ -1.64
HMGB1P3-201ENST00000502802 KCNJ14Q9UNX9 436 aa4.82□□□□□ -1.64
HMGB1P3-201ENST00000502802 R4GN57 208 aa4.82□□□□□ -1.64
HMGB1P3-201ENST00000502802 GOLGA3Q08378 1498 aa4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 TMEM129A0AVI4 362 aa4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 PLSCR5A0PG75 271 aa4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 ANTXRLA6NF34 631 aa4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 E5RGE8 158 aa4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 C16orf97H3BN30 126 aa4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 M0R296 226 aa4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 ATP6V0E1O15342 81 aa4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 CXCL14O95715 111 aa4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 ALPLP05186 524 aa4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 IGKV2-30P06310 120 aa4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 ETS1P14921 441 aa4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 LIFP15018 202 aa4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 AREGP15514 252 aa4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 UGT1A6P19224 532 aa4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 CDKN1AP38936 164 aa4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 CLDN17P56750 224 aa4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 HERV-K104P61576 105 aa4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 RPP38P78345 283 aaKnown RBP4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 SLC3A1Q07837 685 aa4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 GAMTQ14353 236 aa4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 GPR33Q49SQ1 333 aa4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 PDLIM3Q53GG5 364 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 ZNF542PQ5EBM4 170 aa4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 ARMCX4Q5H9R4 360 aa4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 C9orf57Q5W0N0 161 aa4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 CAPRIN2Q6IMN6 1127 aaKnown RBP4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 NEK5Q6P3R8 708 aa4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 B3GLCTQ6Y288 498 aa4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 C1orf186Q6ZWK4 172 aa4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 CPEB2Q7Z5Q1 589 aaKnown RBP4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 NAGSQ8N159 534 aa4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 LRTM2Q8N967 370 aa4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 CCNYQ8ND76 341 aa4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 OR13C3Q8NGS6 347 aa4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 PIK3R3Q92569 461 aa4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 LGALS12Q96DT0 336 aa4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 BTBD9Q96Q07 612 aa4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 ZPBPQ9BS86 351 aa4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 SHARPINQ9H0F6 387 aa4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 TMEM245Q9H330 911 aa4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 C6orf106Q9H6K1 298 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 RPF1Q9H9Y2 349 aaKnown RBP4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 ZCCHC3Q9NUD5 404 aaKnown RBP4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 INTS10Q9NVR2 710 aaKnown RBP4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 FAM118AQ9NWS6 357 aa4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 DONSONQ9NYP3 566 aa4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 MIS18AQ9NYP9 233 aa4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 SPASTQ9UBP0 616 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms