RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 PANX2Q96RD6 677 aa13.83□□□□□ -0.2
TRAF4-212ENST00000498540 EBNA1BP2Q99848 306 aaKnown RBP13.83□□□□□ -0.2
TRAF4-212ENST00000498540 VKORC1Q9BQB6 163 aa13.83□□□□□ -0.2
TRAF4-212ENST00000498540 TRIM5Q9C035 493 aa13.83□□□□□ -0.2
TRAF4-212ENST00000498540 IL22Q9GZX6 179 aa13.83□□□□□ -0.2
TRAF4-212ENST00000498540 SYBUQ9NX95 663 aa13.83□□□□□ -0.2
TRAF4-212ENST00000498540 LRFN1Q9P244 771 aa13.83□□□□□ -0.2
TRAF4-212ENST00000498540 PAK5Q9P286 719 aa13.83□□□□□ -0.2
TRAF4-212ENST00000498540 SPG11Q96JI7 2443 aa13.83□□□□□ -0.2
TRAF4-212ENST00000498540 PRRG2O14669 202 aa13.82□□□□□ -0.2
TRAF4-212ENST00000498540 FANCGO15287 622 aa13.82□□□□□ -0.2
TRAF4-212ENST00000498540 RDH16O75452 317 aa13.82□□□□□ -0.2
TRAF4-212ENST00000498540 SLC25A12O75746 678 aa13.82□□□□□ -0.2
TRAF4-212ENST00000498540 SYF2O95926 243 aaKnown RBP13.82□□□□□ -0.2
TRAF4-212ENST00000498540 F7P08709 466 aaPredicted RBP13.82□□□□□ -0.2
TRAF4-212ENST00000498540 MGAT1P26572 445 aa13.82□□□□□ -0.2
TRAF4-212ENST00000498540 PTGER1P34995 402 aa13.82□□□□□ -0.2
TRAF4-212ENST00000498540 RPL22P35268 128 aaKnown RBP13.82□□□□□ -0.2
TRAF4-212ENST00000498540 CLCN7P51798 805 aa13.82□□□□□ -0.2
TRAF4-212ENST00000498540 ADARP55265 1226 aaKnown RBP13.82□□□□□ -0.2
TRAF4-212ENST00000498540 RHAGQ02094 409 aa13.82□□□□□ -0.2
TRAF4-212ENST00000498540 CUL1Q13616 776 aa13.82□□□□□ -0.2
TRAF4-212ENST00000498540 USP10Q14694 798 aaKnown RBP13.82□□□□□ -0.2
TRAF4-212ENST00000498540 ABRAXAS2Q15018 415 aa13.82□□□□□ -0.2
TRAF4-212ENST00000498540 MAPKAPK3Q16644 382 aa13.82□□□□□ -0.2
TRAF4-212ENST00000498540 SDCCAG8Q86SQ7 713 aaPredicted RBP13.82□□□□□ -0.2
TRAF4-212ENST00000498540 KIAA1328Q86T90 577 aa13.82□□□□□ -0.2
TRAF4-212ENST00000498540 SYCE1Q8N0S2 351 aa13.82□□□□□ -0.2
TRAF4-212ENST00000498540 KIF2BQ8N4N8 673 aa13.82□□□□□ -0.2
TRAF4-212ENST00000498540 MCOLN3Q8TDD5 553 aa13.82□□□□□ -0.2
TRAF4-212ENST00000498540 KIFC1Q9BW19 673 aa13.82□□□□□ -0.2
TRAF4-212ENST00000498540 CDCP1Q9H5V8 836 aa13.82□□□□□ -0.2
TRAF4-212ENST00000498540 EIF2B3Q9NR50 452 aaKnown RBP13.82□□□□□ -0.2
TRAF4-212ENST00000498540 SH2B3Q9UQQ2 575 aa13.82□□□□□ -0.2
TRAF4-212ENST00000498540 INTS1Q8N201 2190 aaKnown RBP13.81□□□□□ -0.2
TRAF4-212ENST00000498540 ZNF860A6NHJ4 632 aa13.81□□□□□ -0.2
TRAF4-212ENST00000498540 E5RI56 91 aa13.81□□□□□ -0.2
TRAF4-212ENST00000498540 NME2P1O60361 137 aa13.81□□□□□ -0.2
TRAF4-212ENST00000498540 IGFBP2P18065 325 aa13.81□□□□□ -0.2
TRAF4-212ENST00000498540 NME2P22392 152 aa13.81□□□□□ -0.2
TRAF4-212ENST00000498540 IMPA1P29218 277 aa13.81□□□□□ -0.2
TRAF4-212ENST00000498540 SLC26A5P58743 744 aa13.81□□□□□ -0.2
TRAF4-212ENST00000498540 RPS15AP62244 130 aaKnown RBP13.81□□□□□ -0.2
TRAF4-212ENST00000498540 BASP1P80723 227 aaKnown RBP13.81□□□□□ -0.2
TRAF4-212ENST00000498540 NSDHLQ15738 373 aa13.81□□□□□ -0.2
TRAF4-212ENST00000498540 CENPUQ71F23 418 aa13.81□□□□□ -0.2
TRAF4-212ENST00000498540 PCGF5Q86SE9 256 aa13.81□□□□□ -0.2
TRAF4-212ENST00000498540 ZNF227Q86WZ6 799 aa13.81□□□□□ -0.2
TRAF4-212ENST00000498540 LGI4Q8N135 537 aa13.81□□□□□ -0.2
TRAF4-212ENST00000498540 MARVELD2Q8N4S9 558 aa13.81□□□□□ -0.2
TRAF4-212ENST00000498540 HORMAD2Q8N7B1 307 aa13.81□□□□□ -0.2
TRAF4-212ENST00000498540 KCT2Q8NC54 265 aa13.81□□□□□ -0.2
TRAF4-212ENST00000498540 FBXO15Q8NCQ5 510 aaPredicted RBP13.81□□□□□ -0.2
TRAF4-212ENST00000498540 PEX11GQ96HA9 241 aa13.81□□□□□ -0.2
TRAF4-212ENST00000498540 TCF12Q99081 682 aa13.81□□□□□ -0.2
TRAF4-212ENST00000498540 LPAR4Q99677 370 aa13.81□□□□□ -0.2
TRAF4-212ENST00000498540 FRMD8P1Q9BZ68 369 aaPredicted RBP13.81□□□□□ -0.2
TRAF4-212ENST00000498540 ANKHQ9HCJ1 492 aa13.81□□□□□ -0.2
TRAF4-212ENST00000498540 NPDC1Q9NQX5 325 aaPredicted RBP13.81□□□□□ -0.2
TRAF4-212ENST00000498540 LANCL2Q9NS86 450 aa13.81□□□□□ -0.2
TRAF4-212ENST00000498540 TMEM184CQ9NVA4 438 aa13.81□□□□□ -0.2
TRAF4-212ENST00000498540 COQ3Q9NZJ6 369 aa13.81□□□□□ -0.2
TRAF4-212ENST00000498540 BFARQ9NZS9 450 aa13.81□□□□□ -0.2
TRAF4-212ENST00000498540 CAPN6Q9Y6Q1 641 aa13.81□□□□□ -0.2
TRAF4-212ENST00000498540 KCNE1BA0A087WTH5 132 aa13.8□□□□□ -0.2
TRAF4-212ENST00000498540 FEZF1A0PJY2 475 aa13.8□□□□□ -0.2
TRAF4-212ENST00000498540 NDC80O14777 642 aa13.8□□□□□ -0.2
TRAF4-212ENST00000498540 KIF5CO60282 957 aa13.8□□□□□ -0.2
TRAF4-212ENST00000498540 CD1EP15812 388 aa13.8□□□□□ -0.2
TRAF4-212ENST00000498540 OGNP20774 298 aaKnown RBP13.8□□□□□ -0.2
TRAF4-212ENST00000498540 TPP2P29144 1249 aaPredicted RBP13.8□□□□□ -0.2
TRAF4-212ENST00000498540 COILP38432 576 aaPredicted RBP13.8□□□□□ -0.2
TRAF4-212ENST00000498540 SKIV2L2P42285 1042 aaKnown RBP13.8□□□□□ -0.2
TRAF4-212ENST00000498540 NPY2RP49146 381 aa13.8□□□□□ -0.2
TRAF4-212ENST00000498540 TAS2R50P59544 299 aa13.8□□□□□ -0.2
TRAF4-212ENST00000498540 TBPL1P62380 186 aa13.8□□□□□ -0.2
TRAF4-212ENST00000498540 ACTN3Q08043 901 aaPredicted RBP13.8□□□□□ -0.2
TRAF4-212ENST00000498540 KCTD19Q17RG1 926 aaPredicted RBP13.8□□□□□ -0.2
TRAF4-212ENST00000498540 SEL1L2Q5TEA6 688 aa13.8□□□□□ -0.2
TRAF4-212ENST00000498540 CD163Q86VB7 1156 aa13.8□□□□□ -0.2
TRAF4-212ENST00000498540 RPS19BP1Q86WX3 136 aaKnown RBP13.8□□□□□ -0.2
TRAF4-212ENST00000498540 SLC13A5Q86YT5 568 aaPredicted RBP13.8□□□□□ -0.2
TRAF4-212ENST00000498540 CILP2Q8IUL8 1156 aa13.8□□□□□ -0.2
TRAF4-212ENST00000498540 PRELID2Q8N945 189 aa13.8□□□□□ -0.2
TRAF4-212ENST00000498540 PLPP5Q8NEB5 264 aa13.8□□□□□ -0.2
TRAF4-212ENST00000498540 OR5T3Q8NGG3 340 aa13.8□□□□□ -0.2
TRAF4-212ENST00000498540 ELP5Q8TE02 316 aa13.8□□□□□ -0.2
TRAF4-212ENST00000498540 ASB11Q8WXH4 323 aa13.8□□□□□ -0.2
TRAF4-212ENST00000498540 TM4SF19Q96DZ7 209 aa13.8□□□□□ -0.2
TRAF4-212ENST00000498540 OLFM1Q99784 485 aa13.8□□□□□ -0.2
TRAF4-212ENST00000498540 SOX13Q9UN79 622 aa13.8□□□□□ -0.2
TRAF4-212ENST00000498540 MED16Q9Y2X0 877 aa13.8□□□□□ -0.2
TRAF4-212ENST00000498540 NAALAD2Q9Y3Q0 740 aa13.8□□□□□ -0.2
TRAF4-212ENST00000498540 HRH3Q9Y5N1 445 aa13.8□□□□□ -0.2
TRAF4-212ENST00000498540 NKX2-6A6NCS4 301 aa13.79□□□□□ -0.2
TRAF4-212ENST00000498540 MAGEB17A8MXT2 336 aa13.79□□□□□ -0.2
TRAF4-212ENST00000498540 GFYI3L273 518 aa13.79□□□□□ -0.2
TRAF4-212ENST00000498540 PFDN6O15212 129 aa13.79□□□□□ -0.2
TRAF4-212ENST00000498540 TPOP07202 933 aa13.79□□□□□ -0.2
TRAF4-212ENST00000498540 RFC3P40938 356 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms