RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 RP1L1Q8IWN7 2480 aaPredicted RBP17.44■□□□□ 0.38
HOXD11-202ENST00000498438 CNTRLQ7Z7A1 2325 aa17.43■□□□□ 0.38
HOXD11-202ENST00000498438 FLNBO75369 2602 aaKnown RBP17.43■□□□□ 0.38
HOXD11-202ENST00000498438 TRBC2A0A5B9 178 aa17.43■□□□□ 0.38
HOXD11-202ENST00000498438 NCF1BA6NI72 391 aaPredicted RBP17.43■□□□□ 0.38
HOXD11-202ENST00000498438 TTLL8A6PVC2 850 aa17.43■□□□□ 0.38
HOXD11-202ENST00000498438 NCF1CA8MVU1 366 aaPredicted RBP17.43■□□□□ 0.38
HOXD11-202ENST00000498438 SGK494L7N484 410 aa17.43■□□□□ 0.38
HOXD11-202ENST00000498438 NDUFS4O43181 175 aa17.43■□□□□ 0.38
HOXD11-202ENST00000498438 KLHL41O60662 606 aa17.43■□□□□ 0.38
HOXD11-202ENST00000498438 HEXBP07686 556 aa17.43■□□□□ 0.38
HOXD11-202ENST00000498438 NCF1P14598 390 aaPredicted RBP17.43■□□□□ 0.38
HOXD11-202ENST00000498438 CD97P48960 835 aa17.43■□□□□ 0.38
HOXD11-202ENST00000498438 EMP2P54851 167 aa17.43■□□□□ 0.38
HOXD11-202ENST00000498438 RAB10P61026 200 aa17.43■□□□□ 0.38
HOXD11-202ENST00000498438 REEP5Q00765 189 aa17.43■□□□□ 0.38
HOXD11-202ENST00000498438 NAB1Q13506 487 aa17.43■□□□□ 0.38
HOXD11-202ENST00000498438 SLMAPQ14BN4 828 aa17.43■□□□□ 0.38
HOXD11-202ENST00000498438 TGFBIQ15582 683 aa17.43■□□□□ 0.38
HOXD11-202ENST00000498438 ATG9BQ674R7 924 aa17.43■□□□□ 0.38
HOXD11-202ENST00000498438 SLC6A19Q695T7 634 aa17.43■□□□□ 0.38
HOXD11-202ENST00000498438 FAAH2Q6GMR7 532 aa17.43■□□□□ 0.38
HOXD11-202ENST00000498438 TMPRSS11BQ86T26 416 aa17.43■□□□□ 0.38
HOXD11-202ENST00000498438 PARP9Q8IXQ6 854 aa17.43■□□□□ 0.38
HOXD11-202ENST00000498438 TBC1D19Q8N5T2 526 aa17.43■□□□□ 0.38
HOXD11-202ENST00000498438 MIB2Q96AX9 1013 aa17.43■□□□□ 0.38
HOXD11-202ENST00000498438 RHBDF1Q96CC6 855 aa17.43■□□□□ 0.38
HOXD11-202ENST00000498438 MOCOSQ96EN8 888 aa17.43■□□□□ 0.38
HOXD11-202ENST00000498438 PELI2Q9HAT8 420 aa17.43■□□□□ 0.38
HOXD11-202ENST00000498438 ANKHQ9HCJ1 492 aa17.43■□□□□ 0.38
HOXD11-202ENST00000498438 LUZP4Q9P127 313 aa17.43■□□□□ 0.38
HOXD11-202ENST00000498438 HCN3Q9P1Z3 774 aa17.43■□□□□ 0.38
HOXD11-202ENST00000498438 FLNCQ14315 2725 aa17.43■□□□□ 0.38
HOXD11-202ENST00000498438 RELNP78509 3460 aa17.43■□□□□ 0.38
HOXD11-202ENST00000498438 PRRC2CQ9Y520 2896 aaKnown RBP17.42■□□□□ 0.38
HOXD11-202ENST00000498438 IPO13O94829 963 aaKnown RBP17.42■□□□□ 0.38
HOXD11-202ENST00000498438 WDR47O94967 919 aa17.42■□□□□ 0.38
HOXD11-202ENST00000498438 HPP00738 406 aa17.42■□□□□ 0.38
HOXD11-202ENST00000498438 COX6A1P12074 109 aa17.42■□□□□ 0.38
HOXD11-202ENST00000498438 CD1DP15813 335 aa17.42■□□□□ 0.38
HOXD11-202ENST00000498438 SCTRP47872 440 aa17.42■□□□□ 0.38
HOXD11-202ENST00000498438 SLC6A12P48065 614 aa17.42■□□□□ 0.38
HOXD11-202ENST00000498438 EFNA3P52797 238 aa17.42■□□□□ 0.38
HOXD11-202ENST00000498438 EEF1A2Q05639 463 aaKnown RBP17.42■□□□□ 0.38
HOXD11-202ENST00000498438 Q0VFX4 171 aa17.42■□□□□ 0.38
HOXD11-202ENST00000498438 IRAK1BP1Q5VVH5 260 aa17.42■□□□□ 0.38
HOXD11-202ENST00000498438 NXPE4Q6UWF7 544 aa17.42■□□□□ 0.38
HOXD11-202ENST00000498438 PDSS2Q86YH6 399 aa17.42■□□□□ 0.38
HOXD11-202ENST00000498438 SHISA5Q8N114 240 aa17.42■□□□□ 0.38
HOXD11-202ENST00000498438 MMGT1Q8N4V1 131 aa17.42■□□□□ 0.38
HOXD11-202ENST00000498438 NOA1Q8NC60 698 aaKnown RBP17.42■□□□□ 0.38
HOXD11-202ENST00000498438 PNPLA2Q96AD5 504 aa17.42■□□□□ 0.38
HOXD11-202ENST00000498438 ZNF160Q9HCG1 818 aa17.42■□□□□ 0.38
HOXD11-202ENST00000498438 MKL2Q9ULH7 1088 aa17.42■□□□□ 0.38
HOXD11-202ENST00000498438 SLC22A7Q9Y694 548 aa17.42■□□□□ 0.38
HOXD11-202ENST00000498438 KCNE2Q9Y6J6 123 aa17.42■□□□□ 0.38
HOXD11-202ENST00000498438 ASH1LQ9NR48 2969 aaKnown RBP17.41■□□□□ 0.38
HOXD11-202ENST00000498438 RDH16O75452 317 aa17.41■□□□□ 0.38
HOXD11-202ENST00000498438 JRKO75564 520 aa17.41■□□□□ 0.38
HOXD11-202ENST00000498438 KLHL18O94889 574 aa17.41■□□□□ 0.38
HOXD11-202ENST00000498438 BMP10O95393 424 aa17.41■□□□□ 0.38
HOXD11-202ENST00000498438 SERPIND1P05546 499 aa17.41■□□□□ 0.38
HOXD11-202ENST00000498438 CXCR2P25025 360 aa17.41■□□□□ 0.38
HOXD11-202ENST00000498438 GMPRP36959 345 aa17.41■□□□□ 0.38
HOXD11-202ENST00000498438 GDF5P43026 501 aa17.41■□□□□ 0.38
HOXD11-202ENST00000498438 XCR1P46094 333 aa17.41■□□□□ 0.38
HOXD11-202ENST00000498438 ATP6V0D1P61421 351 aa17.41■□□□□ 0.38
HOXD11-202ENST00000498438 PWP1Q13610 501 aa17.41■□□□□ 0.38
HOXD11-202ENST00000498438 OR4D1Q15615 310 aa17.41■□□□□ 0.38
HOXD11-202ENST00000498438 IGFL3Q6UXB1 125 aa17.41■□□□□ 0.38
HOXD11-202ENST00000498438 CMC1Q7Z7K0 106 aa17.41■□□□□ 0.38
HOXD11-202ENST00000498438 GPSM1Q86YR5 675 aa17.41■□□□□ 0.38
HOXD11-202ENST00000498438 KLHDC8AQ8IYD2 350 aa17.41■□□□□ 0.38
HOXD11-202ENST00000498438 Q8NA96 180 aa17.41■□□□□ 0.38
HOXD11-202ENST00000498438 MNS1Q8NEH6 495 aa17.41■□□□□ 0.38
HOXD11-202ENST00000498438 OR51Q1Q8NH59 317 aa17.41■□□□□ 0.38
HOXD11-202ENST00000498438 CPT1CQ8TCG5 803 aa17.41■□□□□ 0.38
HOXD11-202ENST00000498438 THOC3Q96J01 351 aaKnown RBP17.41■□□□□ 0.38
HOXD11-202ENST00000498438 UBXN10Q96LJ8 280 aa17.41■□□□□ 0.38
HOXD11-202ENST00000498438 AIF1LQ9BQI0 150 aa17.41■□□□□ 0.38
HOXD11-202ENST00000498438 TMEM79Q9BSE2 394 aa17.41■□□□□ 0.38
HOXD11-202ENST00000498438 VN1R1Q9GZP7 353 aa17.41■□□□□ 0.38
HOXD11-202ENST00000498438 LHPPQ9H008 270 aa17.41■□□□□ 0.38
HOXD11-202ENST00000498438 ZBTB20Q9HC78 741 aaPredicted RBP17.41■□□□□ 0.38
HOXD11-202ENST00000498438 WWOXQ9NZC7 414 aa17.41■□□□□ 0.38
HOXD11-202ENST00000498438 DMGDHQ9UI17 866 aaKnown RBP17.41■□□□□ 0.38
HOXD11-202ENST00000498438 ZFP69BQ9UJL9 534 aa17.41■□□□□ 0.38
HOXD11-202ENST00000498438 NAALAD2Q9Y3Q0 740 aa17.41■□□□□ 0.38
HOXD11-202ENST00000498438 SHANK1Q9Y566 2161 aa17.4■□□□□ 0.38
HOXD11-202ENST00000498438 NSG1A0A0A6YYJ2 146 aa17.4■□□□□ 0.38
HOXD11-202ENST00000498438 A0A1W2PQ72 361 aa17.4■□□□□ 0.38
HOXD11-202ENST00000498438 CTAGE15A4D2H0 777 aa17.4■□□□□ 0.38
HOXD11-202ENST00000498438 ZNF860A6NHJ4 632 aa17.4■□□□□ 0.38
HOXD11-202ENST00000498438 CTAGE8P0CG41 777 aa17.4■□□□□ 0.38
HOXD11-202ENST00000498438 SLC35E2BP0CK96 405 aa17.4■□□□□ 0.38
HOXD11-202ENST00000498438 VARSP26640 1264 aaKnown RBP17.4■□□□□ 0.38
HOXD11-202ENST00000498438 AHRP35869 848 aa17.4■□□□□ 0.38
HOXD11-202ENST00000498438 RGS1Q08116 209 aa17.4■□□□□ 0.38
HOXD11-202ENST00000498438 HERC3Q15034 1050 aa17.4■□□□□ 0.38
HOXD11-202ENST00000498438 FBXO48Q5FWF7 155 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms