RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 FBXL8Q96CD0 374 aa14.58□□□□□ -0.08
NUP50-219ENST00000497960 MTBPQ96DY7 904 aa14.58□□□□□ -0.08
NUP50-219ENST00000497960 MMABQ96EY8 250 aaPredicted RBP14.58□□□□□ -0.08
NUP50-219ENST00000497960 SMAD5Q99717 465 aaKnown RBP14.58□□□□□ -0.08
NUP50-219ENST00000497960 SYNPO2LQ9H987 977 aa14.58□□□□□ -0.08
NUP50-219ENST00000497960 C5AR2Q9P296 337 aa14.58□□□□□ -0.08
NUP50-219ENST00000497960 TRPC4Q9UBN4 977 aa14.58□□□□□ -0.08
NUP50-219ENST00000497960 NOVA2Q9UNW9 492 aaKnown RBP14.58□□□□□ -0.08
NUP50-219ENST00000497960 HS3ST3B1Q9Y662 390 aa14.58□□□□□ -0.08
NUP50-219ENST00000497960 MYO18BQ8IUG5 2567 aa14.57□□□□□ -0.08
NUP50-219ENST00000497960 TNRC6AQ8NDV7 1962 aaKnown RBP14.57□□□□□ -0.08
NUP50-219ENST00000497960 A0A087X1B8 175 aa14.57□□□□□ -0.08
NUP50-219ENST00000497960 HMX2A2RU54 273 aa14.57□□□□□ -0.08
NUP50-219ENST00000497960 TTLL8A6PVC2 850 aa14.57□□□□□ -0.08
NUP50-219ENST00000497960 P2RX6O15547 441 aa14.57□□□□□ -0.08
NUP50-219ENST00000497960 CDH16O75309 829 aa14.57□□□□□ -0.08
NUP50-219ENST00000497960 ALDOAP04075 364 aaKnown RBP14.57□□□□□ -0.08
NUP50-219ENST00000497960 SLC35E2BP0CK96 405 aa14.57□□□□□ -0.08
NUP50-219ENST00000497960 CCDC166P0CW27 439 aa14.57□□□□□ -0.08
NUP50-219ENST00000497960 CDH1P12830 882 aa14.57□□□□□ -0.08
NUP50-219ENST00000497960 NPPBP16860 134 aa14.57□□□□□ -0.08
NUP50-219ENST00000497960 ITGA3P26006 1051 aa14.57□□□□□ -0.08
NUP50-219ENST00000497960 AVPR1BP47901 424 aa14.57□□□□□ -0.08
NUP50-219ENST00000497960 CCR8P51685 355 aa14.57□□□□□ -0.08
NUP50-219ENST00000497960 KLC1Q07866 573 aa14.57□□□□□ -0.08
NUP50-219ENST00000497960 CSHL1Q14406 222 aa14.57□□□□□ -0.08
NUP50-219ENST00000497960 IRAK1BP1Q5VVH5 260 aa14.57□□□□□ -0.08
NUP50-219ENST00000497960 KIRREL2Q6UWL6 708 aa14.57□□□□□ -0.08
NUP50-219ENST00000497960 TMEM207Q6UWW9 146 aa14.57□□□□□ -0.08
NUP50-219ENST00000497960 FRA10AC1Q70Z53 315 aa14.57□□□□□ -0.08
NUP50-219ENST00000497960 CCDC91Q7Z6B0 441 aa14.57□□□□□ -0.08
NUP50-219ENST00000497960 TDRPQ86YL5 185 aa14.57□□□□□ -0.08
NUP50-219ENST00000497960 CNPY4Q8N129 248 aa14.57□□□□□ -0.08
NUP50-219ENST00000497960 RIBC1Q8N443 379 aaPredicted RBP14.57□□□□□ -0.08
NUP50-219ENST00000497960 TBC1D19Q8N5T2 526 aa14.57□□□□□ -0.08
NUP50-219ENST00000497960 CAMKVQ8NCB2 501 aa14.57□□□□□ -0.08
NUP50-219ENST00000497960 OR56A3Q8NH54 315 aa14.57□□□□□ -0.08
NUP50-219ENST00000497960 UNKQ9C0B0 810 aaKnown RBP14.57□□□□□ -0.08
NUP50-219ENST00000497960 VPS11Q9H270 941 aa14.57□□□□□ -0.08
NUP50-219ENST00000497960 C14orf105Q9NVL8 296 aa14.57□□□□□ -0.08
NUP50-219ENST00000497960 C3orf18Q9UK00 162 aa14.57□□□□□ -0.08
NUP50-219ENST00000497960 SH2B3Q9UQQ2 575 aa14.57□□□□□ -0.08
NUP50-219ENST00000497960 IGLV3-12A0A075B6K2 115 aa14.56□□□□□ -0.08
NUP50-219ENST00000497960 A0A096LPK6 155 aa14.56□□□□□ -0.08
NUP50-219ENST00000497960 A0A0A6YYC8 382 aaPredicted RBP14.56□□□□□ -0.08
NUP50-219ENST00000497960 TLDC2A0PJX2 215 aa14.56□□□□□ -0.08
NUP50-219ENST00000497960 I3L1I5 382 aaPredicted RBP14.56□□□□□ -0.08
NUP50-219ENST00000497960 SOCS6O14544 535 aa14.56□□□□□ -0.08
NUP50-219ENST00000497960 IPO13O94829 963 aaKnown RBP14.56□□□□□ -0.08
NUP50-219ENST00000497960 STATHP02808 62 aa14.56□□□□□ -0.08
NUP50-219ENST00000497960 KRT15P19012 456 aa14.56□□□□□ -0.08
NUP50-219ENST00000497960 SLC26A3P40879 764 aa14.56□□□□□ -0.08
NUP50-219ENST00000497960 SOX8P57073 446 aa14.56□□□□□ -0.08
NUP50-219ENST00000497960 FOXK1P85037 733 aa14.56□□□□□ -0.08
NUP50-219ENST00000497960 IRF9Q00978 393 aa14.56□□□□□ -0.08
NUP50-219ENST00000497960 TUBB8Q3ZCM7 444 aa14.56□□□□□ -0.08
NUP50-219ENST00000497960 NADK2Q4G0N4 442 aa14.56□□□□□ -0.08
NUP50-219ENST00000497960 VWA2Q5GFL6 755 aa14.56□□□□□ -0.08
NUP50-219ENST00000497960 SBSNQ6UWP8 590 aa14.56□□□□□ -0.08
NUP50-219ENST00000497960 VN1R4Q7Z5H5 301 aa14.56□□□□□ -0.08
NUP50-219ENST00000497960 ASPGQ86U10 573 aa14.56□□□□□ -0.08
NUP50-219ENST00000497960 ARHGEF39Q8N4T4 335 aa14.56□□□□□ -0.08
NUP50-219ENST00000497960 ABHD11Q8NFV4 315 aa14.56□□□□□ -0.08
NUP50-219ENST00000497960 ANKRD49Q8WVL7 239 aa14.56□□□□□ -0.08
NUP50-219ENST00000497960 TM9SF4Q92544 642 aa14.56□□□□□ -0.08
NUP50-219ENST00000497960 ISL2Q96A47 359 aa14.56□□□□□ -0.08
NUP50-219ENST00000497960 PYCR2Q96C36 320 aa14.56□□□□□ -0.08
NUP50-219ENST00000497960 TSNARE1Q96NA8 513 aa14.56□□□□□ -0.08
NUP50-219ENST00000497960 DERL2Q9GZP9 239 aa14.56□□□□□ -0.08
NUP50-219ENST00000497960 MKKSQ9NPJ1 570 aaPredicted RBP14.56□□□□□ -0.08
NUP50-219ENST00000497960 ACOT9Q9Y305 439 aa14.56□□□□□ -0.08
NUP50-219ENST00000497960 MAP4K5Q9Y4K4 846 aa14.56□□□□□ -0.08
NUP50-219ENST00000497960 FEZF1A0PJY2 475 aa14.55□□□□□ -0.08
NUP50-219ENST00000497960 MASP2O00187 686 aa14.55□□□□□ -0.08
NUP50-219ENST00000497960 CDC7O00311 574 aa14.55□□□□□ -0.08
NUP50-219ENST00000497960 MAP2K7O14733 419 aa14.55□□□□□ -0.08
NUP50-219ENST00000497960 FOXS1O43638 330 aa14.55□□□□□ -0.08
NUP50-219ENST00000497960 WISP3O95389 354 aaPredicted RBP14.55□□□□□ -0.08
NUP50-219ENST00000497960 C2P06681 752 aa14.55□□□□□ -0.08
NUP50-219ENST00000497960 LTA4HP09960 611 aaKnown RBP14.55□□□□□ -0.08
NUP50-219ENST00000497960 ACPPP15309 386 aa14.55□□□□□ -0.08
NUP50-219ENST00000497960 CXCR2P25025 360 aa14.55□□□□□ -0.08
NUP50-219ENST00000497960 GMPRP36959 345 aa14.55□□□□□ -0.08
NUP50-219ENST00000497960 BCL6P41182 706 aa14.55□□□□□ -0.08
NUP50-219ENST00000497960 MAGEA12P43365 314 aa14.55□□□□□ -0.08
NUP50-219ENST00000497960 EMP2P54851 167 aa14.55□□□□□ -0.08
NUP50-219ENST00000497960 MLLT10P55197 1068 aa14.55□□□□□ -0.08
NUP50-219ENST00000497960 ATP6V0D1P61421 351 aa14.55□□□□□ -0.08
NUP50-219ENST00000497960 IGFBP7Q16270 282 aa14.55□□□□□ -0.08
NUP50-219ENST00000497960 KRT71Q3SY84 523 aa14.55□□□□□ -0.08
NUP50-219ENST00000497960 BEND6Q5SZJ8 279 aaPredicted RBP14.55□□□□□ -0.08
NUP50-219ENST00000497960 ADAMTSL2Q86TH1 951 aa14.55□□□□□ -0.08
NUP50-219ENST00000497960 SPATA6LQ8N4H0 392 aa14.55□□□□□ -0.08
NUP50-219ENST00000497960 EFCAB3Q8N7B9 438 aa14.55□□□□□ -0.08
NUP50-219ENST00000497960 AMER3Q8N944 861 aa14.55□□□□□ -0.08
NUP50-219ENST00000497960 MFSD9Q8NBP5 474 aa14.55□□□□□ -0.08
NUP50-219ENST00000497960 OR11G2Q8NGC1 345 aa14.55□□□□□ -0.08
NUP50-219ENST00000497960 KCTD4Q8WVF5 259 aa14.55□□□□□ -0.08
NUP50-219ENST00000497960 SLC13A3Q8WWT9 602 aa14.55□□□□□ -0.08
NUP50-219ENST00000497960 EGFL8Q99944 293 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms