RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 PPP2R5CQ13362 524 aa3.58□□□□□ -1.84
SMC4-225ENST00000497203 ZNF770Q6IQ21 691 aaPredicted RBP3.58□□□□□ -1.84
SMC4-225ENST00000497203 KLHL10Q6JEL2 608 aa3.58□□□□□ -1.84
SMC4-225ENST00000497203 MACC1Q6ZN28 852 aa3.58□□□□□ -1.84
SMC4-225ENST00000497203 GPC2Q8N158 579 aa3.58□□□□□ -1.84
SMC4-225ENST00000497203 GPATCH11Q8N954 259 aa3.58□□□□□ -1.84
SMC4-225ENST00000497203 OR1L3Q8NH93 324 aa3.58□□□□□ -1.84
SMC4-225ENST00000497203 KRT35Q92764 455 aa3.58□□□□□ -1.84
SMC4-225ENST00000497203 AP2M1Q96CW1 435 aa3.58□□□□□ -1.84
SMC4-225ENST00000497203 EEF2KMTQ96G04 330 aa3.58□□□□□ -1.84
SMC4-225ENST00000497203 PDLIM5Q96HC4 596 aaKnown RBP3.58□□□□□ -1.84
SMC4-225ENST00000497203 PGLYRP2Q96PD5 576 aa3.58□□□□□ -1.84
SMC4-225ENST00000497203 RASL10BQ96S79 203 aa3.58□□□□□ -1.84
SMC4-225ENST00000497203 NKX3-1Q99801 234 aaPredicted RBP3.58□□□□□ -1.84
SMC4-225ENST00000497203 ALKBH7Q9BT30 221 aaPredicted RBP3.58□□□□□ -1.84
SMC4-225ENST00000497203 THAP2Q9H0W7 228 aa3.58□□□□□ -1.84
SMC4-225ENST00000497203 NAPBQ9H115 298 aa3.58□□□□□ -1.84
SMC4-225ENST00000497203 CUEDC2Q9H467 287 aa3.58□□□□□ -1.84
SMC4-225ENST00000497203 DBNDD1Q9H9R9 158 aa3.58□□□□□ -1.84
SMC4-225ENST00000497203 C2orf42Q9NWW7 574 aa3.58□□□□□ -1.84
SMC4-225ENST00000497203 ELF5Q9UKW6 265 aaPredicted RBP3.58□□□□□ -1.84
SMC4-225ENST00000497203 HBS1LQ9Y450 684 aaKnown RBP3.58□□□□□ -1.84
SMC4-225ENST00000497203 ARID2Q68CP9 1835 aa3.58□□□□□ -1.84
SMC4-225ENST00000497203 CYSRT1A8MQ03 144 aa3.57□□□□□ -1.84
SMC4-225ENST00000497203 ERVV-2B6SEH9 535 aa3.57□□□□□ -1.84
SMC4-225ENST00000497203 CCL24O00175 119 aa3.57□□□□□ -1.84
SMC4-225ENST00000497203 CACNB4O00305 520 aaPredicted RBP3.57□□□□□ -1.84
SMC4-225ENST00000497203 FPGTO14772 594 aa3.57□□□□□ -1.84
SMC4-225ENST00000497203 TEX28O15482 410 aa3.57□□□□□ -1.84
SMC4-225ENST00000497203 GRAP2O75791 330 aa3.57□□□□□ -1.84
SMC4-225ENST00000497203 VTNP04004 478 aa3.57□□□□□ -1.84
SMC4-225ENST00000497203 RAF1P04049 648 aa3.57□□□□□ -1.84
SMC4-225ENST00000497203 HMBSP08397 361 aa3.57□□□□□ -1.84
SMC4-225ENST00000497203 PRSS56P0CW18 603 aa3.57□□□□□ -1.84
SMC4-225ENST00000497203 RBMS1P29558 406 aaKnown RBP3.57□□□□□ -1.84
SMC4-225ENST00000497203 CHRNB4P30926 498 aa3.57□□□□□ -1.84
SMC4-225ENST00000497203 LINC01547P58512 204 aaPredicted RBP3.57□□□□□ -1.84
SMC4-225ENST00000497203 RPP38P78345 283 aaKnown RBP3.57□□□□□ -1.84
SMC4-225ENST00000497203 SLC34A1Q06495 639 aa3.57□□□□□ -1.84
SMC4-225ENST00000497203 ACTN3Q08043 901 aaPredicted RBP3.57□□□□□ -1.84
SMC4-225ENST00000497203 ABRQ12979 859 aa3.57□□□□□ -1.84
SMC4-225ENST00000497203 RBM39Q14498 530 aaKnown RBP3.57□□□□□ -1.84
SMC4-225ENST00000497203 ACKR1Q16570 336 aa3.57□□□□□ -1.84
SMC4-225ENST00000497203 ZNF74Q16587 644 aa3.57□□□□□ -1.84
SMC4-225ENST00000497203 SLC39A12Q504Y0 691 aa3.57□□□□□ -1.84
SMC4-225ENST00000497203 ARMCX4Q5H9R4 360 aa3.57□□□□□ -1.84
SMC4-225ENST00000497203 PM20D1Q6GTS8 502 aa3.57□□□□□ -1.84
SMC4-225ENST00000497203 PSRC1Q6PGN9 363 aaPredicted RBP3.57□□□□□ -1.84
SMC4-225ENST00000497203 SLC24A5Q71RS6 500 aa3.57□□□□□ -1.84
SMC4-225ENST00000497203 NPHP3Q7Z494 1330 aa3.57□□□□□ -1.84
SMC4-225ENST00000497203 CPEB2Q7Z5Q1 589 aaKnown RBP3.57□□□□□ -1.84
SMC4-225ENST00000497203 APLFQ8IW19 511 aaPredicted RBP3.57□□□□□ -1.84
SMC4-225ENST00000497203 AQP12AQ8IXF9 295 aa3.57□□□□□ -1.84
SMC4-225ENST00000497203 ZNF843Q8N446 348 aa3.57□□□□□ -1.84
SMC4-225ENST00000497203 LRTM2Q8N967 370 aa3.57□□□□□ -1.84
SMC4-225ENST00000497203 TRIM58Q8NG06 486 aa3.57□□□□□ -1.84
SMC4-225ENST00000497203 OR10G8Q8NGN5 311 aa3.57□□□□□ -1.84
SMC4-225ENST00000497203 OR2T11Q8NH01 316 aa3.57□□□□□ -1.84
SMC4-225ENST00000497203 ZNRF4Q8WWF5 429 aa3.57□□□□□ -1.84
SMC4-225ENST00000497203 BCL2L2Q92843 193 aaPredicted RBP3.57□□□□□ -1.84
SMC4-225ENST00000497203 ATP6V0A1Q93050 837 aa3.57□□□□□ -1.84
SMC4-225ENST00000497203 CFAP36Q96G28 342 aa3.57□□□□□ -1.84
SMC4-225ENST00000497203 RBM41Q96IZ5 413 aaKnown RBP3.57□□□□□ -1.84
SMC4-225ENST00000497203 C10orf90Q96M02 699 aa3.57□□□□□ -1.84
SMC4-225ENST00000497203 ACAT2Q9BWD1 397 aa3.57□□□□□ -1.84
SMC4-225ENST00000497203 NYXQ9GZU5 481 aa3.57□□□□□ -1.84
SMC4-225ENST00000497203 TBC1D13Q9NVG8 400 aa3.57□□□□□ -1.84
SMC4-225ENST00000497203 COMMD8Q9NX08 183 aa3.57□□□□□ -1.84
SMC4-225ENST00000497203 FBXL4Q9UKA2 621 aa3.57□□□□□ -1.84
SMC4-225ENST00000497203 COLEC10Q9Y6Z7 277 aa3.57□□□□□ -1.84
SMC4-225ENST00000497203 A0A087WUV0 522 aaPredicted RBP3.56□□□□□ -1.84
SMC4-225ENST00000497203 C2orf92A0A1B0GVN3 265 aa3.56□□□□□ -1.84
SMC4-225ENST00000497203 E5RGE8 158 aa3.56□□□□□ -1.84
SMC4-225ENST00000497203 PGRMC2O15173 223 aa3.56□□□□□ -1.84
SMC4-225ENST00000497203 KERAO60938 352 aa3.56□□□□□ -1.84
SMC4-225ENST00000497203 SEC24AO95486 1093 aa3.56□□□□□ -1.84
SMC4-225ENST00000497203 THEGLP0DJG4 465 aa3.56□□□□□ -1.84
SMC4-225ENST00000497203 DLATP10515 647 aaKnown RBP3.56□□□□□ -1.84
SMC4-225ENST00000497203 STMN1P16949 149 aa3.56□□□□□ -1.84
SMC4-225ENST00000497203 ELAVL4P26378 380 aaKnown RBP3.56□□□□□ -1.84
SMC4-225ENST00000497203 SERPINB6P35237 376 aa3.56□□□□□ -1.84
SMC4-225ENST00000497203 ATP6V1E1P36543 226 aa3.56□□□□□ -1.84
SMC4-225ENST00000497203 LBX1P52954 281 aa3.56□□□□□ -1.84
SMC4-225ENST00000497203 NME5P56597 212 aa3.56□□□□□ -1.84
SMC4-225ENST00000497203 C17orf67Q0P5P2 114 aa3.56□□□□□ -1.84
SMC4-225ENST00000497203 NPRL3Q12980 569 aa3.56□□□□□ -1.84
SMC4-225ENST00000497203 RPS6KA1Q15418 735 aa3.56□□□□□ -1.84
SMC4-225ENST00000497203 PTPN14Q15678 1187 aa3.56□□□□□ -1.84
SMC4-225ENST00000497203 EXT1Q16394 746 aa3.56□□□□□ -1.84
SMC4-225ENST00000497203 AARDQ4LEZ3 155 aa3.56□□□□□ -1.84
SMC4-225ENST00000497203 IFI44LQ53G44 452 aa3.56□□□□□ -1.84
SMC4-225ENST00000497203 ZNF542PQ5EBM4 170 aa3.56□□□□□ -1.84
SMC4-225ENST00000497203 AGAP6Q5VW22 663 aa3.56□□□□□ -1.84
SMC4-225ENST00000497203 ZNF444Q8N0Y2 327 aaPredicted RBP3.56□□□□□ -1.84
SMC4-225ENST00000497203 TMEM99Q8N816 258 aa3.56□□□□□ -1.84
SMC4-225ENST00000497203 TMEM178AQ8NBL3 297 aa3.56□□□□□ -1.84
SMC4-225ENST00000497203 OR5AP2Q8NGF4 316 aa3.56□□□□□ -1.84
SMC4-225ENST00000497203 MGARPQ8TDB4 240 aa3.56□□□□□ -1.84
SMC4-225ENST00000497203 UBE2Q2Q8WVN8 375 aa3.56□□□□□ -1.84
SMC4-225ENST00000497203 APOBEC4Q8WW27 367 aaKnown RBP3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms