RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 ACSM1Q08AH1 577 aa2.52□□□□□ -2.01
VPS26A-208ENST00000497022 ILF2Q12905 390 aaKnown RBP2.52□□□□□ -2.01
VPS26A-208ENST00000497022 DUSP5Q16690 384 aa2.52□□□□□ -2.01
VPS26A-208ENST00000497022 FGD3Q5JSP0 725 aa2.52□□□□□ -2.01
VPS26A-208ENST00000497022 ATP1A1-AS1Q5TC04 95 aa2.52□□□□□ -2.01
VPS26A-208ENST00000497022 WDR78Q5VTH9 848 aa2.52□□□□□ -2.01
VPS26A-208ENST00000497022 SLC22A15Q8IZD6 547 aa2.52□□□□□ -2.01
VPS26A-208ENST00000497022 ANKRD13CQ8N6S4 541 aa2.52□□□□□ -2.01
VPS26A-208ENST00000497022 POMGNT2Q8NAT1 580 aa2.52□□□□□ -2.01
VPS26A-208ENST00000497022 POGLUT1Q8NBL1 392 aa2.52□□□□□ -2.01
VPS26A-208ENST00000497022 NSMAFQ92636 917 aa2.52□□□□□ -2.01
VPS26A-208ENST00000497022 CHMP4AQ9BY43 222 aa2.52□□□□□ -2.01
VPS26A-208ENST00000497022 JPT2Q9H910 190 aa2.52□□□□□ -2.01
VPS26A-208ENST00000497022 IL36AQ9UHA7 158 aa2.52□□□□□ -2.01
VPS26A-208ENST00000497022 NPHP3Q7Z494 1330 aa2.51□□□□□ -2.01
VPS26A-208ENST00000497022 A0A087WWV3 80 aa2.51□□□□□ -2.01
VPS26A-208ENST00000497022 A0A087WZ39 114 aa2.51□□□□□ -2.01
VPS26A-208ENST00000497022 TRBC2A0A5B9 178 aa2.51□□□□□ -2.01
VPS26A-208ENST00000497022 RNF103O00237 685 aa2.51□□□□□ -2.01
VPS26A-208ENST00000497022 PHF1O43189 567 aaPredicted RBP2.51□□□□□ -2.01
VPS26A-208ENST00000497022 STARD3NLO95772 234 aa2.51□□□□□ -2.01
VPS26A-208ENST00000497022 F3P13726 295 aa2.51□□□□□ -2.01
VPS26A-208ENST00000497022 MC5RP33032 325 aa2.51□□□□□ -2.01
VPS26A-208ENST00000497022 SFTPDP35247 375 aa2.51□□□□□ -2.01
VPS26A-208ENST00000497022 ATP4BP51164 291 aa2.51□□□□□ -2.01
VPS26A-208ENST00000497022 DLK1P80370 383 aa2.51□□□□□ -2.01
VPS26A-208ENST00000497022 PTGISQ16647 500 aa2.51□□□□□ -2.01
VPS26A-208ENST00000497022 TMEM266Q2M3C6 531 aa2.51□□□□□ -2.01
VPS26A-208ENST00000497022 CRY2Q49AN0 593 aa2.51□□□□□ -2.01
VPS26A-208ENST00000497022 FAM106AQ4KMX7 169 aa2.51□□□□□ -2.01
VPS26A-208ENST00000497022 LACTB2Q53H82 288 aaPredicted RBP2.51□□□□□ -2.01
VPS26A-208ENST00000497022 ARMC4Q5T2S8 1044 aa2.51□□□□□ -2.01
VPS26A-208ENST00000497022 NAA16Q6N069 864 aaPredicted RBP2.51□□□□□ -2.01
VPS26A-208ENST00000497022 VITQ6UXI7 678 aa2.51□□□□□ -2.01
VPS26A-208ENST00000497022 TLK2Q86UE8 772 aa2.51□□□□□ -2.01
VPS26A-208ENST00000497022 CCDC60Q8IWA6 550 aaPredicted RBP2.51□□□□□ -2.01
VPS26A-208ENST00000497022 GPD1LQ8N335 351 aa2.51□□□□□ -2.01
VPS26A-208ENST00000497022 FGFRL1Q8N441 504 aa2.51□□□□□ -2.01
VPS26A-208ENST00000497022 SPPL2AQ8TCT8 520 aa2.51□□□□□ -2.01
VPS26A-208ENST00000497022 SSC4DQ8WTU2 575 aa2.51□□□□□ -2.01
VPS26A-208ENST00000497022 PGM2Q96G03 612 aa2.51□□□□□ -2.01
VPS26A-208ENST00000497022 PILRBQ9UKJ0 227 aa2.51□□□□□ -2.01
VPS26A-208ENST00000497022 NEDD4P46934 1319 aa2.5□□□□□ -2.01
VPS26A-208ENST00000497022 IQCMA0A1B0GVH7 501 aa2.5□□□□□ -2.01
VPS26A-208ENST00000497022 C17orf105B2RV13 164 aa2.5□□□□□ -2.01
VPS26A-208ENST00000497022 F8VVB4 439 aa2.5□□□□□ -2.01
VPS26A-208ENST00000497022 F8VWA3 439 aa2.5□□□□□ -2.01
VPS26A-208ENST00000497022 RTCAO00442 366 aaKnown RBP2.5□□□□□ -2.01
VPS26A-208ENST00000497022 OGTO15294 1046 aa2.5□□□□□ -2.01
VPS26A-208ENST00000497022 MTRF1O75570 445 aaKnown RBP2.5□□□□□ -2.01
VPS26A-208ENST00000497022 CD59P13987 128 aa2.5□□□□□ -2.01
VPS26A-208ENST00000497022 ACHEP22303 614 aa2.5□□□□□ -2.01
VPS26A-208ENST00000497022 PKLRP30613 574 aa2.5□□□□□ -2.01
VPS26A-208ENST00000497022 DUTP33316 252 aaKnown RBP2.5□□□□□ -2.01
VPS26A-208ENST00000497022 HSD17B3P37058 310 aa2.5□□□□□ -2.01
VPS26A-208ENST00000497022 KHKP50053 298 aa2.5□□□□□ -2.01
VPS26A-208ENST00000497022 NDUFV3P56181 108 aaKnown RBP2.5□□□□□ -2.01
VPS26A-208ENST00000497022 CACNG1Q06432 222 aa2.5□□□□□ -2.01
VPS26A-208ENST00000497022 KIAA0141Q14154 515 aaPredicted RBP2.5□□□□□ -2.01
VPS26A-208ENST00000497022 C3AR1Q16581 482 aa2.5□□□□□ -2.01
VPS26A-208ENST00000497022 UPP1Q16831 310 aa2.5□□□□□ -2.01
VPS26A-208ENST00000497022 C9orf152Q5JTZ5 239 aa2.5□□□□□ -2.01
VPS26A-208ENST00000497022 KRT39Q6A163 491 aa2.5□□□□□ -2.01
VPS26A-208ENST00000497022 GPR139Q6DWJ6 353 aa2.5□□□□□ -2.01
VPS26A-208ENST00000497022 REG3GQ6UW15 175 aa2.5□□□□□ -2.01
VPS26A-208ENST00000497022 PRSS55Q6UWB4 352 aaPredicted RBP2.5□□□□□ -2.01
VPS26A-208ENST00000497022 BRINP3Q76B58 766 aa2.5□□□□□ -2.01
VPS26A-208ENST00000497022 PLPPR4Q7Z2D5 763 aa2.5□□□□□ -2.01
VPS26A-208ENST00000497022 ANKRD33Q7Z3H0 272 aa2.5□□□□□ -2.01
VPS26A-208ENST00000497022 ADCK1Q86TW2 530 aa2.5□□□□□ -2.01
VPS26A-208ENST00000497022 CATSPER3Q86XQ3 398 aa2.5□□□□□ -2.01
VPS26A-208ENST00000497022 C4orf32Q8N8J7 132 aa2.5□□□□□ -2.01
VPS26A-208ENST00000497022 CSNK1G2-AS1Q8NCQ2 148 aa2.5□□□□□ -2.01
VPS26A-208ENST00000497022 OR4C15Q8NGM1 316 aa2.5□□□□□ -2.01
VPS26A-208ENST00000497022 SPSB1Q96BD6 273 aa2.5□□□□□ -2.01
VPS26A-208ENST00000497022 NXPE2Q96DL1 559 aa2.5□□□□□ -2.01
VPS26A-208ENST00000497022 NEDD4LQ96PU5 975 aa2.5□□□□□ -2.01
VPS26A-208ENST00000497022 CCDC28BQ9BUN5 200 aa2.5□□□□□ -2.01
VPS26A-208ENST00000497022 RIMS4Q9H426 269 aaPredicted RBP2.5□□□□□ -2.01
VPS26A-208ENST00000497022 RNF121Q9H920 327 aa2.5□□□□□ -2.01
VPS26A-208ENST00000497022 FBXL4Q9UKA2 621 aa2.5□□□□□ -2.01
VPS26A-208ENST00000497022 MRPS18CQ9Y3D5 142 aaKnown RBP2.5□□□□□ -2.01
VPS26A-208ENST00000497022 hCG_38984A0A1B0GV85 526 aa2.49□□□□□ -2.01
VPS26A-208ENST00000497022 ARHGEF33A8MVX0 844 aa2.49□□□□□ -2.01
VPS26A-208ENST00000497022 MAGEB2O15479 319 aa2.49□□□□□ -2.01
VPS26A-208ENST00000497022 ZNF354AO60765 605 aaPredicted RBP2.49□□□□□ -2.01
VPS26A-208ENST00000497022 PRDM1O75626 825 aa2.49□□□□□ -2.01
VPS26A-208ENST00000497022 SLCO2B1O94956 709 aa2.49□□□□□ -2.01
VPS26A-208ENST00000497022 GPR183P32249 361 aa2.49□□□□□ -2.01
VPS26A-208ENST00000497022 CAPZA2P47755 286 aa2.49□□□□□ -2.01
VPS26A-208ENST00000497022 RAB28P51157 221 aa2.49□□□□□ -2.01
VPS26A-208ENST00000497022 TRA2BP62995 288 aaKnown RBP2.49□□□□□ -2.01
VPS26A-208ENST00000497022 BECN1Q14457 450 aa2.49□□□□□ -2.01
VPS26A-208ENST00000497022 SUSD4Q5VX71 490 aa2.49□□□□□ -2.01
VPS26A-208ENST00000497022 RBPMS2Q6ZRY4 209 aaKnown RBP2.49□□□□□ -2.01
VPS26A-208ENST00000497022 PRPF39Q86UA1 669 aaKnown RBP2.49□□□□□ -2.01
VPS26A-208ENST00000497022 RTL3Q8N8U3 475 aaKnown RBP2.49□□□□□ -2.01
VPS26A-208ENST00000497022 RPLP0P6Q8NHW5 317 aa2.49□□□□□ -2.01
VPS26A-208ENST00000497022 CASP10Q92851 521 aa2.49□□□□□ -2.01
VPS26A-208ENST00000497022 UBAC1Q9BSL1 405 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms