RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 MS4A10Q96PG2 267 aa3.59□□□□□ -1.83
TRIM4-205ENST00000496896 IWS1Q96ST2 819 aa3.59□□□□□ -1.83
TRIM4-205ENST00000496896 PKP2Q99959 881 aa3.59□□□□□ -1.83
TRIM4-205ENST00000496896 DCTN5Q9BTE1 182 aa3.59□□□□□ -1.83
TRIM4-205ENST00000496896 MRPL1Q9BYD6 325 aaKnown RBP3.59□□□□□ -1.83
TRIM4-205ENST00000496896 NACAP1Q9BZK3 213 aa3.59□□□□□ -1.83
TRIM4-205ENST00000496896 WWTR1Q9GZV5 400 aa3.59□□□□□ -1.83
TRIM4-205ENST00000496896 HSD3B7Q9H2F3 369 aa3.59□□□□□ -1.83
TRIM4-205ENST00000496896 MAGEF1Q9HAY2 307 aa3.59□□□□□ -1.83
TRIM4-205ENST00000496896 SERINC1Q9NRX5 453 aa3.59□□□□□ -1.83
TRIM4-205ENST00000496896 RMND1Q9NWS8 449 aa3.59□□□□□ -1.83
TRIM4-205ENST00000496896 ZNF446Q9NWS9 450 aa3.59□□□□□ -1.83
TRIM4-205ENST00000496896 AATFQ9NY61 560 aaKnown RBP eCLIP3.59□□□□□ -1.83
TRIM4-205ENST00000496896 RAI14Q9P0K7 980 aa3.59□□□□□ -1.83
TRIM4-205ENST00000496896 B3GAT1Q9P2W7 334 aa3.59□□□□□ -1.83
TRIM4-205ENST00000496896 LRWD1Q9UFC0 647 aa3.59□□□□□ -1.83
TRIM4-205ENST00000496896 MYH3P11055 1940 aa3.59□□□□□ -1.83
TRIM4-205ENST00000496896 RTL9Q8NET4 1388 aa3.59□□□□□ -1.83
TRIM4-205ENST00000496896 DISP2A7MBM2 1401 aa3.59□□□□□ -1.84
TRIM4-205ENST00000496896 BCL9LQ86UU0 1499 aa3.59□□□□□ -1.84
TRIM4-205ENST00000496896 NOTCH2Q04721 2471 aa3.59□□□□□ -1.84
TRIM4-205ENST00000496896 ANKRD36CQ5JPF3 1778 aa3.58□□□□□ -1.84
TRIM4-205ENST00000496896 LOC102723996A0A087X1L8 192 aa3.58□□□□□ -1.84
TRIM4-205ENST00000496896 GPR75-ASB3A0A0A6YYF3 556 aa3.58□□□□□ -1.84
TRIM4-205ENST00000496896 ERICH2A1L162 156 aa3.58□□□□□ -1.84
TRIM4-205ENST00000496896 CTAGE15A4D2H0 777 aa3.58□□□□□ -1.84
TRIM4-205ENST00000496896 TMEM221A6NGB7 291 aa3.58□□□□□ -1.84
TRIM4-205ENST00000496896 ANKRD61A6NGH8 418 aa3.58□□□□□ -1.84
TRIM4-205ENST00000496896 GPAA1O43292 621 aa3.58□□□□□ -1.84
TRIM4-205ENST00000496896 NXPH2O95156 264 aa3.58□□□□□ -1.84
TRIM4-205ENST00000496896 VTNP04004 478 aa3.58□□□□□ -1.84
TRIM4-205ENST00000496896 CALM1P0DP23 149 aa3.58□□□□□ -1.84
TRIM4-205ENST00000496896 CALM2P0DP24 149 aa3.58□□□□□ -1.84
TRIM4-205ENST00000496896 CALM3P0DP25 149 aa3.58□□□□□ -1.84
TRIM4-205ENST00000496896 OAS2P29728 719 aaKnown RBP3.58□□□□□ -1.84
TRIM4-205ENST00000496896 CLNS1AP54105 237 aaKnown RBP3.58□□□□□ -1.84
TRIM4-205ENST00000496896 KRT83P78385 493 aa3.58□□□□□ -1.84
TRIM4-205ENST00000496896 AIMP1Q12904 312 aaKnown RBP3.58□□□□□ -1.84
TRIM4-205ENST00000496896 ZSCAN26Q16670 478 aa3.58□□□□□ -1.84
TRIM4-205ENST00000496896 FASTKD1Q53R41 847 aaKnown RBP3.58□□□□□ -1.84
TRIM4-205ENST00000496896 ELFN2Q5R3F8 820 aa3.58□□□□□ -1.84
TRIM4-205ENST00000496896 SPINK14Q6IE38 97 aa3.58□□□□□ -1.84
TRIM4-205ENST00000496896 GBP6Q6ZN66 633 aa3.58□□□□□ -1.84
TRIM4-205ENST00000496896 CTAGE6Q86UF2 777 aa3.58□□□□□ -1.84
TRIM4-205ENST00000496896 KBTBD6Q86V97 674 aa3.58□□□□□ -1.84
TRIM4-205ENST00000496896 ARHGAP24Q8N264 748 aa3.58□□□□□ -1.84
TRIM4-205ENST00000496896 TC2NQ8N9U0 490 aa3.58□□□□□ -1.84
TRIM4-205ENST00000496896 PRSS33Q8NF86 280 aa3.58□□□□□ -1.84
TRIM4-205ENST00000496896 CCDC148Q8NFR7 591 aa3.58□□□□□ -1.84
TRIM4-205ENST00000496896 TCEANC2Q96MN5 208 aa3.58□□□□□ -1.84
TRIM4-205ENST00000496896 PAFAH2Q99487 392 aa3.58□□□□□ -1.84
TRIM4-205ENST00000496896 RAD9AQ99638 391 aa3.58□□□□□ -1.84
TRIM4-205ENST00000496896 NAPGQ99747 312 aaPredicted RBP3.58□□□□□ -1.84
TRIM4-205ENST00000496896 NUP85Q9BW27 656 aa3.58□□□□□ -1.84
TRIM4-205ENST00000496896 CARD6Q9BX69 1037 aa3.58□□□□□ -1.84
TRIM4-205ENST00000496896 FUT8Q9BYC5 575 aa3.58□□□□□ -1.84
TRIM4-205ENST00000496896 TSGA10Q9BZW7 698 aa3.58□□□□□ -1.84
TRIM4-205ENST00000496896 MIS12Q9H081 205 aa3.58□□□□□ -1.84
TRIM4-205ENST00000496896 S1PR5Q9H228 398 aa3.58□□□□□ -1.84
TRIM4-205ENST00000496896 CUEDC2Q9H467 287 aa3.58□□□□□ -1.84
TRIM4-205ENST00000496896 YY1AP1Q9H869 796 aa3.58□□□□□ -1.84
TRIM4-205ENST00000496896 RBM28Q9NW13 759 aaKnown RBP3.58□□□□□ -1.84
TRIM4-205ENST00000496896 CACNG4Q9UBN1 327 aa3.58□□□□□ -1.84
TRIM4-205ENST00000496896 NAP1L2Q9ULW6 460 aaPredicted RBP3.58□□□□□ -1.84
TRIM4-205ENST00000496896 MROH7-TTC4A0A0A0MT08 1334 aa3.58□□□□□ -1.84
TRIM4-205ENST00000496896 TNS3Q68CZ2 1445 aa3.58□□□□□ -1.84
TRIM4-205ENST00000496896 C1orf167Q5SNV9 1468 aa3.58□□□□□ -1.84
TRIM4-205ENST00000496896 MEGF6O75095 1541 aa3.58□□□□□ -1.84
TRIM4-205ENST00000496896 KCPQ6ZWJ8 1503 aa3.58□□□□□ -1.84
TRIM4-205ENST00000496896 RGPD5Q99666 1765 aa3.58□□□□□ -1.84
TRIM4-205ENST00000496896 ECM29Q5VYK3 1845 aa3.58□□□□□ -1.84
TRIM4-205ENST00000496896 MYO5AQ9Y4I1 1855 aaKnown RBP3.58□□□□□ -1.84
TRIM4-205ENST00000496896 AKAP11Q9UKA4 1901 aa3.58□□□□□ -1.84
TRIM4-205ENST00000496896 LAD1O00515 517 aa3.57□□□□□ -1.84
TRIM4-205ENST00000496896 ADAMDEC1O15204 470 aa3.57□□□□□ -1.84
TRIM4-205ENST00000496896 GLRA3O75311 464 aa3.57□□□□□ -1.84
TRIM4-205ENST00000496896 WDHD1O75717 1129 aaPredicted RBP3.57□□□□□ -1.84
TRIM4-205ENST00000496896 ZWINTO95229 277 aa3.57□□□□□ -1.84
TRIM4-205ENST00000496896 ABCB11O95342 1321 aa3.57□□□□□ -1.84
TRIM4-205ENST00000496896 DANCRP0C864 163 aa3.57□□□□□ -1.84
TRIM4-205ENST00000496896 CSH1P0DML2 217 aa3.57□□□□□ -1.84
TRIM4-205ENST00000496896 CSH2P0DML3 217 aa3.57□□□□□ -1.84
TRIM4-205ENST00000496896 MYL6BP14649 208 aa3.57□□□□□ -1.84
TRIM4-205ENST00000496896 GATA1P15976 413 aaPredicted RBP3.57□□□□□ -1.84
TRIM4-205ENST00000496896 UGT1A4P22310 534 aa3.57□□□□□ -1.84
TRIM4-205ENST00000496896 PAX3P23760 479 aa3.57□□□□□ -1.84
TRIM4-205ENST00000496896 GABRA5P31644 462 aa3.57□□□□□ -1.84
TRIM4-205ENST00000496896 KRT2P35908 639 aa3.57□□□□□ -1.84
TRIM4-205ENST00000496896 NKX2-1P43699 371 aaPredicted RBP3.57□□□□□ -1.84
TRIM4-205ENST00000496896 NRIP1P48552 1158 aa3.57□□□□□ -1.84
TRIM4-205ENST00000496896 EIF5P55010 431 aaKnown RBP3.57□□□□□ -1.84
TRIM4-205ENST00000496896 TPD52P55327 224 aaPredicted RBP3.57□□□□□ -1.84
TRIM4-205ENST00000496896 AKAP17AQ02040 695 aaKnown RBP3.57□□□□□ -1.84
TRIM4-205ENST00000496896 ORC2Q13416 577 aaPredicted RBP3.57□□□□□ -1.84
TRIM4-205ENST00000496896 GRAPQ13588 217 aa3.57□□□□□ -1.84
TRIM4-205ENST00000496896 PCLAFQ15004 111 aa3.57□□□□□ -1.84
TRIM4-205ENST00000496896 UGP2Q16851 508 aa3.57□□□□□ -1.84
TRIM4-205ENST00000496896 SNAI3Q3KNW1 292 aa3.57□□□□□ -1.84
TRIM4-205ENST00000496896 PLCH1Q4KWH8 1693 aa3.57□□□□□ -1.84
TRIM4-205ENST00000496896 KLHL26Q53HC5 615 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms