RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 MFSD4BQ5TF39 518 aa9□□□□□ -0.97
SMARCAL1-213ENST00000496037 NCBP2-AS2Q69YL0 99 aa9□□□□□ -0.97
SMARCAL1-213ENST00000496037 FIGLAQ6QHK4 219 aa9□□□□□ -0.97
SMARCAL1-213ENST00000496037 OR52N2Q8NGI0 321 aa9□□□□□ -0.97
SMARCAL1-213ENST00000496037 C16orf52Q8NHV5 167 aa9□□□□□ -0.97
SMARCAL1-213ENST00000496037 M1APQ8TC57 530 aa9□□□□□ -0.97
SMARCAL1-213ENST00000496037 TRIM63Q969Q1 353 aa9□□□□□ -0.97
SMARCAL1-213ENST00000496037 MVB12AQ96EY5 273 aa9□□□□□ -0.97
SMARCAL1-213ENST00000496037 IMP4Q96G21 291 aaKnown RBP9□□□□□ -0.97
SMARCAL1-213ENST00000496037 C10orf90Q96M02 699 aa9□□□□□ -0.97
SMARCAL1-213ENST00000496037 ZNF830Q96NB3 372 aaPredicted RBP9□□□□□ -0.97
SMARCAL1-213ENST00000496037 SMC6Q96SB8 1091 aa9□□□□□ -0.97
SMARCAL1-213ENST00000496037 CCL19Q99731 98 aa9□□□□□ -0.97
SMARCAL1-213ENST00000496037 ZFYVE21Q9BQ24 234 aa9□□□□□ -0.97
SMARCAL1-213ENST00000496037 DEFB127Q9H1M4 99 aa9□□□□□ -0.97
SMARCAL1-213ENST00000496037 ASB8Q9H765 288 aa9□□□□□ -0.97
SMARCAL1-213ENST00000496037 MMP25Q9NPA2 562 aa9□□□□□ -0.97
SMARCAL1-213ENST00000496037 HACD3Q9P035 362 aa9□□□□□ -0.97
SMARCAL1-213ENST00000496037 STOX2Q9P2F5 926 aaPredicted RBP9□□□□□ -0.97
SMARCAL1-213ENST00000496037 CRLS1Q9UJA2 301 aa9□□□□□ -0.97
SMARCAL1-213ENST00000496037 OR14I1A6ND48 311 aa8.99□□□□□ -0.97
SMARCAL1-213ENST00000496037 MBD3L4A6NDZ8 208 aaPredicted RBP8.99□□□□□ -0.97
SMARCAL1-213ENST00000496037 TMEM191CA6NGB0 347 aa8.99□□□□□ -0.97
SMARCAL1-213ENST00000496037 MBD3L5A6NJ08 208 aaPredicted RBP8.99□□□□□ -0.97
SMARCAL1-213ENST00000496037 NDC80O14777 642 aa8.99□□□□□ -0.97
SMARCAL1-213ENST00000496037 CBFA2T2O43439 604 aa8.99□□□□□ -0.97
SMARCAL1-213ENST00000496037 BUD23O43709 281 aaKnown RBP8.99□□□□□ -0.97
SMARCAL1-213ENST00000496037 TLX2O43763 284 aaPredicted RBP8.99□□□□□ -0.97
SMARCAL1-213ENST00000496037 WDR1O75083 606 aa8.99□□□□□ -0.97
SMARCAL1-213ENST00000496037 FAM157CP0CG43 387 aa8.99□□□□□ -0.97
SMARCAL1-213ENST00000496037 BMP4P12644 408 aa8.99□□□□□ -0.97
SMARCAL1-213ENST00000496037 ATP1B2P14415 290 aaPredicted RBP8.99□□□□□ -0.97
SMARCAL1-213ENST00000496037 BMP5P22003 454 aa8.99□□□□□ -0.97
SMARCAL1-213ENST00000496037 ITGA8P53708 1063 aa8.99□□□□□ -0.97
SMARCAL1-213ENST00000496037 POLR2FP61218 127 aaKnown RBP8.99□□□□□ -0.97
SMARCAL1-213ENST00000496037 SUMO1P63165 101 aaKnown RBP8.99□□□□□ -0.97
SMARCAL1-213ENST00000496037 ZBTB17Q13105 803 aa8.99□□□□□ -0.97
SMARCAL1-213ENST00000496037 PAFAH1B3Q15102 231 aaKnown RBP8.99□□□□□ -0.97
SMARCAL1-213ENST00000496037 SF1Q15637 639 aaKnown RBP8.99□□□□□ -0.97
SMARCAL1-213ENST00000496037 SLC14A2Q15849 920 aa8.99□□□□□ -0.97
SMARCAL1-213ENST00000496037 PDCD2Q16342 344 aaPredicted RBP8.99□□□□□ -0.97
SMARCAL1-213ENST00000496037 FBXL19-AS1Q494R0 122 aa8.99□□□□□ -0.97
SMARCAL1-213ENST00000496037 CCDC183Q5T5S1 534 aa8.99□□□□□ -0.97
SMARCAL1-213ENST00000496037 C1orf185Q5T7R7 199 aa8.99□□□□□ -0.97
SMARCAL1-213ENST00000496037 RIPPLY2Q5TAB7 128 aa8.99□□□□□ -0.97
SMARCAL1-213ENST00000496037 ZNF468Q5VIY5 522 aaPredicted RBP8.99□□□□□ -0.97
SMARCAL1-213ENST00000496037 FOXB2Q5VYV0 432 aa8.99□□□□□ -0.97
SMARCAL1-213ENST00000496037 PPP1R2P3Q6NXS1 205 aa8.99□□□□□ -0.97
SMARCAL1-213ENST00000496037 BHLHB9Q6PI77 547 aa8.99□□□□□ -0.97
SMARCAL1-213ENST00000496037 LANCL3Q6ZV70 420 aa8.99□□□□□ -0.97
SMARCAL1-213ENST00000496037 TAX1BP1Q86VP1 789 aa8.99□□□□□ -0.97
SMARCAL1-213ENST00000496037 HSCBQ8IWL3 235 aa8.99□□□□□ -0.97
SMARCAL1-213ENST00000496037 SULF2Q8IWU5 870 aa8.99□□□□□ -0.97
SMARCAL1-213ENST00000496037 SCUBE1Q8IWY4 988 aa8.99□□□□□ -0.97
SMARCAL1-213ENST00000496037 RELL2Q8NC24 303 aaPredicted RBP8.99□□□□□ -0.97
SMARCAL1-213ENST00000496037 OR2W6PQ8NHA6 318 aa8.99□□□□□ -0.97
SMARCAL1-213ENST00000496037 OR5K2Q8NHB8 316 aa8.99□□□□□ -0.97
SMARCAL1-213ENST00000496037 LINC01560Q8TB33 94 aa8.99□□□□□ -0.97
SMARCAL1-213ENST00000496037 BLOC1S5Q8TDH9 187 aa8.99□□□□□ -0.97
SMARCAL1-213ENST00000496037 MMABQ96EY8 250 aaPredicted RBP8.99□□□□□ -0.97
SMARCAL1-213ENST00000496037 COPS8Q99627 209 aa8.99□□□□□ -0.97
SMARCAL1-213ENST00000496037 CEP41Q9BYV8 373 aa8.99□□□□□ -0.97
SMARCAL1-213ENST00000496037 PLA2G12AQ9BZM1 189 aa8.99□□□□□ -0.97
SMARCAL1-213ENST00000496037 TRIM7Q9C029 511 aa8.99□□□□□ -0.97
SMARCAL1-213ENST00000496037 SLC25A51Q9H1U9 297 aa8.99□□□□□ -0.97
SMARCAL1-213ENST00000496037 GANQ9H2C0 597 aa8.99□□□□□ -0.97
SMARCAL1-213ENST00000496037 CDCP1Q9H5V8 836 aa8.99□□□□□ -0.97
SMARCAL1-213ENST00000496037 A0A0J9YVX5 310 aa8.98□□□□□ -0.97
SMARCAL1-213ENST00000496037 A0A1W2PPR1 153 aa8.98□□□□□ -0.97
SMARCAL1-213ENST00000496037 HSPB2A8KAH6 182 aa8.98□□□□□ -0.97
SMARCAL1-213ENST00000496037 PRSS47A8MTI9 375 aa8.98□□□□□ -0.97
SMARCAL1-213ENST00000496037 ACOT7O00154 380 aa8.98□□□□□ -0.97
SMARCAL1-213ENST00000496037 STX7O15400 261 aaKnown RBP8.98□□□□□ -0.97
SMARCAL1-213ENST00000496037 PEX1O43933 1283 aa8.98□□□□□ -0.97
SMARCAL1-213ENST00000496037 CTSVO60911 334 aa8.98□□□□□ -0.97
SMARCAL1-213ENST00000496037 DNAJC8O75937 253 aaPredicted RBP8.98□□□□□ -0.97
SMARCAL1-213ENST00000496037 SRP72O76094 671 aaKnown RBP8.98□□□□□ -0.97
SMARCAL1-213ENST00000496037 AP2A1O95782 977 aa8.98□□□□□ -0.97
SMARCAL1-213ENST00000496037 CYC1P08574 325 aa8.98□□□□□ -0.97
SMARCAL1-213ENST00000496037 NAT2P11245 290 aa8.98□□□□□ -0.97
SMARCAL1-213ENST00000496037 TCF4P15884 667 aa8.98□□□□□ -0.97
SMARCAL1-213ENST00000496037 FPR1P21462 350 aa8.98□□□□□ -0.97
SMARCAL1-213ENST00000496037 TPP2P29144 1249 aaPredicted RBP8.98□□□□□ -0.97
SMARCAL1-213ENST00000496037 PKLRP30613 574 aa8.98□□□□□ -0.97
SMARCAL1-213ENST00000496037 SLC26A3P40879 764 aa8.98□□□□□ -0.97
SMARCAL1-213ENST00000496037 PRKCIP41743 596 aa8.98□□□□□ -0.97
SMARCAL1-213ENST00000496037 CHRNA4P43681 627 aa8.98□□□□□ -0.97
SMARCAL1-213ENST00000496037 JAM2P57087 298 aa8.98□□□□□ -0.97
SMARCAL1-213ENST00000496037 IFI35P80217 286 aaPredicted RBP8.98□□□□□ -0.97
SMARCAL1-213ENST00000496037 NOMO1Q15155 1222 aa8.98□□□□□ -0.97
SMARCAL1-213ENST00000496037 HSPB2Q16082 182 aa8.98□□□□□ -0.97
SMARCAL1-213ENST00000496037 FAM209AQ5JX71 171 aa8.98□□□□□ -0.97
SMARCAL1-213ENST00000496037 RTL6Q6ICC9 239 aa8.98□□□□□ -0.97
SMARCAL1-213ENST00000496037 FRMPD2BQ6IN97 320 aa8.98□□□□□ -0.97
SMARCAL1-213ENST00000496037 MZT2BQ6NZ67 158 aa8.98□□□□□ -0.97
SMARCAL1-213ENST00000496037 CFAP161Q6P656 301 aa8.98□□□□□ -0.97
SMARCAL1-213ENST00000496037 RPS19BP1Q86WX3 136 aaKnown RBP8.98□□□□□ -0.97
SMARCAL1-213ENST00000496037 ZC3H7AQ8IWR0 971 aaKnown RBP8.98□□□□□ -0.97
SMARCAL1-213ENST00000496037 AMER3Q8N944 861 aa8.98□□□□□ -0.97
SMARCAL1-213ENST00000496037 ZFP62Q8NB50 900 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms