RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 ZBTB14O43829 449 aa16.52■□□□□ 0.24
TMEM53-209ENST00000495630 KCNJ11Q14654 390 aa16.52■□□□□ 0.24
TMEM53-209ENST00000495630 NSDHLQ15738 373 aa16.52■□□□□ 0.24
TMEM53-209ENST00000495630 MAPKAPK3Q16644 382 aa16.52■□□□□ 0.24
TMEM53-209ENST00000495630 TTLL9Q3SXZ7 439 aa16.52■□□□□ 0.24
TMEM53-209ENST00000495630 SFT2D3Q587I9 215 aa16.52■□□□□ 0.24
TMEM53-209ENST00000495630 SEL1L2Q5TEA6 688 aa16.52■□□□□ 0.24
TMEM53-209ENST00000495630 MEI1Q5TIA1 1274 aa16.52■□□□□ 0.24
TMEM53-209ENST00000495630 PAPD4Q6PIY7 484 aaKnown RBP16.52■□□□□ 0.24
TMEM53-209ENST00000495630 PRSS41Q7RTY9 318 aa16.52■□□□□ 0.24
TMEM53-209ENST00000495630 VN1R4Q7Z5H5 301 aa16.52■□□□□ 0.24
TMEM53-209ENST00000495630 SLC13A5Q86YT5 568 aaPredicted RBP16.52■□□□□ 0.24
TMEM53-209ENST00000495630 CHERPQ8IWX8 916 aaKnown RBP16.52■□□□□ 0.24
TMEM53-209ENST00000495630 TXLNBQ8N3L3 684 aa16.52■□□□□ 0.24
TMEM53-209ENST00000495630 CAMKVQ8NCB2 501 aa16.52■□□□□ 0.24
TMEM53-209ENST00000495630 SDCCAG3Q96C92 435 aa16.52■□□□□ 0.24
TMEM53-209ENST00000495630 LPAR4Q99677 370 aa16.52■□□□□ 0.24
TMEM53-209ENST00000495630 OLFM1Q99784 485 aa16.52■□□□□ 0.24
TMEM53-209ENST00000495630 FAM129AQ9BZQ8 928 aa16.52■□□□□ 0.24
TMEM53-209ENST00000495630 CDCP1Q9H5V8 836 aa16.52■□□□□ 0.24
TMEM53-209ENST00000495630 ANKHQ9HCJ1 492 aa16.52■□□□□ 0.24
TMEM53-209ENST00000495630 ABCF3Q9NUQ8 709 aa16.52■□□□□ 0.24
TMEM53-209ENST00000495630 COQ3Q9NZJ6 369 aa16.52■□□□□ 0.24
TMEM53-209ENST00000495630 HCN3Q9P1Z3 774 aa16.52■□□□□ 0.24
TMEM53-209ENST00000495630 VPS9D1Q9Y2B5 631 aa16.52■□□□□ 0.24
TMEM53-209ENST00000495630 ASB1Q9Y576 335 aa16.52■□□□□ 0.24
TMEM53-209ENST00000495630 GOLGA8KD6RF30 607 aa16.51■□□□□ 0.23
TMEM53-209ENST00000495630 GOLGA8TH3BQL2 631 aa16.51■□□□□ 0.23
TMEM53-209ENST00000495630 SGK494L7N484 410 aa16.51■□□□□ 0.23
TMEM53-209ENST00000495630 MAN1A2O60476 641 aa16.51■□□□□ 0.23
TMEM53-209ENST00000495630 SYF2O95926 243 aaKnown RBP16.51■□□□□ 0.23
TMEM53-209ENST00000495630 MPC1LP0DKB6 136 aa16.51■□□□□ 0.23
TMEM53-209ENST00000495630 CD1EP15812 388 aa16.51■□□□□ 0.23
TMEM53-209ENST00000495630 OGNP20774 298 aaKnown RBP16.51■□□□□ 0.23
TMEM53-209ENST00000495630 SKIV2L2P42285 1042 aaKnown RBP16.51■□□□□ 0.23
TMEM53-209ENST00000495630 CLCN7P51798 805 aa16.51■□□□□ 0.23
TMEM53-209ENST00000495630 CDK16Q00536 496 aa16.51■□□□□ 0.23
TMEM53-209ENST00000495630 CES3Q6UWW8 571 aa16.51■□□□□ 0.23
TMEM53-209ENST00000495630 CYHR1Q6ZMK1 362 aa16.51■□□□□ 0.23
TMEM53-209ENST00000495630 NCCRP1Q6ZVX7 275 aaPredicted RBP16.51■□□□□ 0.23
TMEM53-209ENST00000495630 RPS19BP1Q86WX3 136 aaKnown RBP16.51■□□□□ 0.23
TMEM53-209ENST00000495630 SHISA5Q8N114 240 aa16.51■□□□□ 0.23
TMEM53-209ENST00000495630 TM4SF19Q96DZ7 209 aa16.51■□□□□ 0.23
TMEM53-209ENST00000495630 PPT2Q9UMR5 302 aa16.51■□□□□ 0.23
TMEM53-209ENST00000495630 MAGEB17A8MXT2 336 aa16.5■□□□□ 0.23
TMEM53-209ENST00000495630 NDC80O14777 642 aa16.5■□□□□ 0.23
TMEM53-209ENST00000495630 STATHP02808 62 aa16.5■□□□□ 0.23
TMEM53-209ENST00000495630 IL1RNP18510 177 aa16.5■□□□□ 0.23
TMEM53-209ENST00000495630 MGAT1P26572 445 aa16.5■□□□□ 0.23
TMEM53-209ENST00000495630 ST13P50502 369 aaKnown RBP16.5■□□□□ 0.23
TMEM53-209ENST00000495630 RHAGQ02094 409 aa16.5■□□□□ 0.23
TMEM53-209ENST00000495630 GTF3C1Q12789 2109 aa16.5■□□□□ 0.23
TMEM53-209ENST00000495630 USP10Q14694 798 aaKnown RBP16.5■□□□□ 0.23
TMEM53-209ENST00000495630 ABRAXAS2Q15018 415 aa16.5■□□□□ 0.23
TMEM53-209ENST00000495630 RPS6KA1Q15418 735 aa16.5■□□□□ 0.23
TMEM53-209ENST00000495630 CCNG2Q16589 344 aa16.5■□□□□ 0.23
TMEM53-209ENST00000495630 ARMC3Q5W041 872 aa16.5■□□□□ 0.23
TMEM53-209ENST00000495630 KIAA0930Q6ICG6 404 aaPredicted RBP16.5■□□□□ 0.23
TMEM53-209ENST00000495630 NEPROQ6NW34 567 aa16.5■□□□□ 0.23
TMEM53-209ENST00000495630 CENPUQ71F23 418 aa16.5■□□□□ 0.23
TMEM53-209ENST00000495630 CILP2Q8IUL8 1156 aa16.5■□□□□ 0.23
TMEM53-209ENST00000495630 ELP5Q8TE02 316 aa16.5■□□□□ 0.23
TMEM53-209ENST00000495630 OR1F2PQ96R84 312 aa16.5■□□□□ 0.23
TMEM53-209ENST00000495630 MACROD1Q9BQ69 325 aa16.5■□□□□ 0.23
TMEM53-209ENST00000495630 TSGA10Q9BZW7 698 aa16.5■□□□□ 0.23
TMEM53-209ENST00000495630 PCBD2Q9H0N5 130 aa16.5■□□□□ 0.23
TMEM53-209ENST00000495630 TRIM45Q9H8W5 580 aaPredicted RBP16.5■□□□□ 0.23
TMEM53-209ENST00000495630 INTS10Q9NVR2 710 aaKnown RBP16.5■□□□□ 0.23
TMEM53-209ENST00000495630 SOX13Q9UN79 622 aa16.5■□□□□ 0.23
TMEM53-209ENST00000495630 NEU2Q9Y3R4 380 aa16.5■□□□□ 0.23
TMEM53-209ENST00000495630 SLC22A7Q9Y694 548 aa16.5■□□□□ 0.23
TMEM53-209ENST00000495630 CACNA1CQ13936 2221 aa16.49■□□□□ 0.23
TMEM53-209ENST00000495630 NME2P1O60361 137 aa16.49■□□□□ 0.23
TMEM53-209ENST00000495630 SLC25A12O75746 678 aa16.49■□□□□ 0.23
TMEM53-209ENST00000495630 ENO3P13929 434 aaPredicted RBP16.49■□□□□ 0.23
TMEM53-209ENST00000495630 ZNF24P17028 368 aa16.49■□□□□ 0.23
TMEM53-209ENST00000495630 NME2P22392 152 aa16.49■□□□□ 0.23
TMEM53-209ENST00000495630 SLC26A5P58743 744 aa16.49■□□□□ 0.23
TMEM53-209ENST00000495630 BASP1P80723 227 aaKnown RBP16.49■□□□□ 0.23
TMEM53-209ENST00000495630 MPP1Q00013 466 aa16.49■□□□□ 0.23
TMEM53-209ENST00000495630 HSF1Q00613 529 aa16.49■□□□□ 0.23
TMEM53-209ENST00000495630 RNFT1Q5M7Z0 435 aa16.49■□□□□ 0.23
TMEM53-209ENST00000495630 DRICH1Q6PGQ1 229 aaPredicted RBP16.49■□□□□ 0.23
TMEM53-209ENST00000495630 C3P1Q6ZMU1 363 aa16.49■□□□□ 0.23
TMEM53-209ENST00000495630 FGD2Q7Z6J4 655 aa16.49■□□□□ 0.23
TMEM53-209ENST00000495630 PRELID2Q8N945 189 aa16.49■□□□□ 0.23
TMEM53-209ENST00000495630 POGLUT1Q8NBL1 392 aa16.49■□□□□ 0.23
TMEM53-209ENST00000495630 SLC13A3Q8WWT9 602 aa16.49■□□□□ 0.23
TMEM53-209ENST00000495630 SLC30A3Q99726 388 aa16.49■□□□□ 0.23
TMEM53-209ENST00000495630 SYBUQ9NX95 663 aa16.49■□□□□ 0.23
TMEM53-209ENST00000495630 DHRS7Q9Y394 339 aa16.49■□□□□ 0.23
TMEM53-209ENST00000495630 NF1P21359 2839 aa16.48■□□□□ 0.23
TMEM53-209ENST00000495630 FOXO6A8MYZ6 492 aa16.48■□□□□ 0.23
TMEM53-209ENST00000495630 ZNHIT1O43257 154 aa16.48■□□□□ 0.23
TMEM53-209ENST00000495630 PAMP19021 973 aa16.48■□□□□ 0.23
TMEM53-209ENST00000495630 IMPA1P29218 277 aa16.48■□□□□ 0.23
TMEM53-209ENST00000495630 CYB561P49447 251 aa16.48■□□□□ 0.23
TMEM53-209ENST00000495630 OR4D2P58180 307 aa16.48■□□□□ 0.23
TMEM53-209ENST00000495630 ZNF468Q5VIY5 522 aaPredicted RBP16.48■□□□□ 0.23
TMEM53-209ENST00000495630 TMEM211Q6ICI0 200 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms