RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 G3V2L1 256 aa18.5■□□□□ 0.55
HDAC4-212ENST00000495497 RGS16O15492 202 aaPredicted RBP18.5■□□□□ 0.55
HDAC4-212ENST00000495497 PLIN3O60664 434 aa18.5■□□□□ 0.55
HDAC4-212ENST00000495497 TSPAN8P19075 237 aa18.5■□□□□ 0.55
HDAC4-212ENST00000495497 AGXTP21549 392 aa18.5■□□□□ 0.55
HDAC4-212ENST00000495497 ATP5F1P24539 256 aaPredicted RBP18.5■□□□□ 0.55
HDAC4-212ENST00000495497 CXCR2P25025 360 aa18.5■□□□□ 0.55
HDAC4-212ENST00000495497 FOXL2P58012 376 aa18.5■□□□□ 0.55
HDAC4-212ENST00000495497 RPS18P62269 152 aaKnown RBP18.5■□□□□ 0.55
HDAC4-212ENST00000495497 MUM1Q2TAK8 710 aa18.5■□□□□ 0.55
HDAC4-212ENST00000495497 NKAIN1Q4KMZ8 207 aa18.5■□□□□ 0.55
HDAC4-212ENST00000495497 MLIPQ5VWP3 458 aa18.5■□□□□ 0.55
HDAC4-212ENST00000495497 LRIG3Q6UXM1 1119 aa18.5■□□□□ 0.55
HDAC4-212ENST00000495497 TMIGD1Q6UXZ0 262 aa18.5■□□□□ 0.55
HDAC4-212ENST00000495497 CCDC81Q6ZN84 652 aa18.5■□□□□ 0.55
HDAC4-212ENST00000495497 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.5■□□□□ 0.552e-7■■■■■ 278.5
HDAC4-212ENST00000495497 KRT78Q8N1N4 520 aa18.5■□□□□ 0.55
HDAC4-212ENST00000495497 WDR34Q96EX3 536 aa18.5■□□□□ 0.55
HDAC4-212ENST00000495497 NLNQ9BYT8 704 aa18.5■□□□□ 0.55
HDAC4-212ENST00000495497 EHD1Q9H4M9 534 aa18.5■□□□□ 0.55
HDAC4-212ENST00000495497 NOL11Q9H8H0 719 aaKnown RBP18.5■□□□□ 0.55
HDAC4-212ENST00000495497 ZBTB26Q9HCK0 441 aa18.5■□□□□ 0.55
HDAC4-212ENST00000495497 SLC22A11Q9NSA0 550 aa18.5■□□□□ 0.55
HDAC4-212ENST00000495497 A0A0A6YYC8 382 aaPredicted RBP18.49■□□□□ 0.55
HDAC4-212ENST00000495497 I3L1I5 382 aaPredicted RBP18.49■□□□□ 0.55
HDAC4-212ENST00000495497 PPP6CO00743 305 aa18.49■□□□□ 0.55
HDAC4-212ENST00000495497 TXNDC9O14530 226 aa18.49■□□□□ 0.55
HDAC4-212ENST00000495497 OR7A17O14581 309 aa18.49■□□□□ 0.55
HDAC4-212ENST00000495497 FOXS1O43638 330 aa18.49■□□□□ 0.55
HDAC4-212ENST00000495497 WFS1O76024 890 aa18.49■□□□□ 0.55
HDAC4-212ENST00000495497 RPS17P08708 135 aaKnown RBP18.49■□□□□ 0.55
HDAC4-212ENST00000495497 AHRP35869 848 aa18.49■□□□□ 0.55
HDAC4-212ENST00000495497 CDH13P55290 713 aa18.49■□□□□ 0.55
HDAC4-212ENST00000495497 CXADRP78310 365 aa18.49■□□□□ 0.55
HDAC4-212ENST00000495497 TBCCQ15814 346 aa18.49■□□□□ 0.55
HDAC4-212ENST00000495497 CCDC153Q494R4 210 aa18.49■□□□□ 0.55
HDAC4-212ENST00000495497 UNC50Q53HI1 259 aa18.49■□□□□ 0.55
HDAC4-212ENST00000495497 FAM219BQ5XKK7 198 aa18.49■□□□□ 0.55
HDAC4-212ENST00000495497 PRSS41Q7RTY9 318 aa18.49■□□□□ 0.55
HDAC4-212ENST00000495497 VN1R5Q7Z5H4 357 aa18.49■□□□□ 0.55
HDAC4-212ENST00000495497 TMEM151BQ8IW70 566 aa18.49■□□□□ 0.55
HDAC4-212ENST00000495497 ENDOVQ8N8Q3 282 aaKnown RBP18.49■□□□□ 0.55
HDAC4-212ENST00000495497 CREB3L4Q8TEY5 395 aa18.49■□□□□ 0.55
HDAC4-212ENST00000495497 APOPT1Q96IL0 206 aa18.49■□□□□ 0.55
HDAC4-212ENST00000495497 CDK15Q96Q40 435 aa18.49■□□□□ 0.55
HDAC4-212ENST00000495497 TMEM237Q96Q45 408 aa18.49■□□□□ 0.55
HDAC4-212ENST00000495497 EFCAB11Q9BUY7 163 aa18.49■□□□□ 0.55
HDAC4-212ENST00000495497 SEMA4BQ9NPR2 832 aaPredicted RBP18.49■□□□□ 0.55
HDAC4-212ENST00000495497 IFT80Q9P2H3 777 aaPredicted RBP18.49■□□□□ 0.55
HDAC4-212ENST00000495497 CNOT3O75175 753 aaKnown RBP18.48■□□□□ 0.55
HDAC4-212ENST00000495497 B3GALT4O96024 378 aa18.48■□□□□ 0.55
HDAC4-212ENST00000495497 SLC35G6P0C7Q6 338 aa18.48■□□□□ 0.55
HDAC4-212ENST00000495497 MYL2P10916 166 aa18.48■□□□□ 0.55
HDAC4-212ENST00000495497 HNF4AP41235 474 aa18.48■□□□□ 0.55
HDAC4-212ENST00000495497 CASP2P42575 452 aa18.48■□□□□ 0.55
HDAC4-212ENST00000495497 EMP3P54852 163 aa18.48■□□□□ 0.55
HDAC4-212ENST00000495497 TMPRSS3P57727 454 aa18.48■□□□□ 0.55
HDAC4-212ENST00000495497 HYAL2Q12891 473 aa18.48■□□□□ 0.55
HDAC4-212ENST00000495497 COL28A1Q2UY09 1125 aa18.48■□□□□ 0.55
HDAC4-212ENST00000495497 ZNF678Q5SXM1 525 aa18.48■□□□□ 0.55
HDAC4-212ENST00000495497 ARHGAP40Q5TG30 622 aa18.48■□□□□ 0.55
HDAC4-212ENST00000495497 GARNL3Q5VVW2 1013 aa18.48■□□□□ 0.55
HDAC4-212ENST00000495497 TMEM214Q6NUQ4 689 aaKnown RBP18.48■□□□□ 0.55
HDAC4-212ENST00000495497 ZYG11AQ6WRX3 759 aa18.48■□□□□ 0.55
HDAC4-212ENST00000495497 COX15Q7KZN9 410 aa18.48■□□□□ 0.55
HDAC4-212ENST00000495497 MYLK4Q86YV6 388 aaPredicted RBP18.48■□□□□ 0.55
HDAC4-212ENST00000495497 SHISA5Q8N114 240 aa18.48■□□□□ 0.55
HDAC4-212ENST00000495497 CCDC63Q8NA47 563 aa18.48■□□□□ 0.55
HDAC4-212ENST00000495497 OR52B6Q8NGF0 335 aa18.48■□□□□ 0.55
HDAC4-212ENST00000495497 NT5CQ8TCD5 201 aa18.48■□□□□ 0.55
HDAC4-212ENST00000495497 ZNF483Q8TF39 744 aaPredicted RBP18.48■□□□□ 0.55
HDAC4-212ENST00000495497 CCT6BQ92526 530 aa18.48■□□□□ 0.55
HDAC4-212ENST00000495497 ATP6V1E2Q96A05 226 aa18.48■□□□□ 0.55
HDAC4-212ENST00000495497 MMABQ96EY8 250 aaPredicted RBP18.48■□□□□ 0.55
HDAC4-212ENST00000495497 SMC6Q96SB8 1091 aa18.48■□□□□ 0.55
HDAC4-212ENST00000495497 DPH2Q9BQC3 489 aaPredicted RBP18.48■□□□□ 0.55
HDAC4-212ENST00000495497 AICDAQ9GZX7 198 aa18.48■□□□□ 0.55
HDAC4-212ENST00000495497 KLHL31Q9H511 634 aa18.48■□□□□ 0.55
HDAC4-212ENST00000495497 NT5DC2Q9H857 520 aa18.48■□□□□ 0.55
HDAC4-212ENST00000495497 ACTR8Q9H981 624 aa18.48■□□□□ 0.55
HDAC4-212ENST00000495497 MKS1Q9NXB0 559 aa18.48■□□□□ 0.55
HDAC4-212ENST00000495497 SLC17A7Q9P2U7 560 aa18.48■□□□□ 0.55
HDAC4-212ENST00000495497 FARSAQ9Y285 508 aaKnown RBP18.48■□□□□ 0.55
HDAC4-212ENST00000495497 RNF11Q9Y3C5 154 aa18.48■□□□□ 0.55
HDAC4-212ENST00000495497 MDC1Q14676 2089 aaKnown RBP18.48■□□□□ 0.55
HDAC4-212ENST00000495497 A0A1B0GTL3 188 aa18.47■□□□□ 0.55
HDAC4-212ENST00000495497 FFAR3O14843 346 aa18.47■□□□□ 0.55
HDAC4-212ENST00000495497 NKX2-8O15522 239 aa18.47■□□□□ 0.55
HDAC4-212ENST00000495497 GPR42O15529 346 aa18.47■□□□□ 0.55
HDAC4-212ENST00000495497 PCNAP12004 261 aa18.47■□□□□ 0.55
HDAC4-212ENST00000495497 IL1RNP18510 177 aa18.47■□□□□ 0.55
HDAC4-212ENST00000495497 CCNG1P51959 295 aa18.47■□□□□ 0.55
HDAC4-212ENST00000495497 PRKAA2P54646 552 aa18.47■□□□□ 0.55
HDAC4-212ENST00000495497 RPS15P62841 145 aaKnown RBP18.47■□□□□ 0.55
HDAC4-212ENST00000495497 HERVK_113P63132 956 aa18.47■□□□□ 0.55
HDAC4-212ENST00000495497 PCDH1Q08174 1060 aa18.47■□□□□ 0.55
HDAC4-212ENST00000495497 LAPTM5Q13571 262 aa18.47■□□□□ 0.55
HDAC4-212ENST00000495497 PWP1Q13610 501 aa18.47■□□□□ 0.55
HDAC4-212ENST00000495497 E2F2Q14209 437 aa18.47■□□□□ 0.55
HDAC4-212ENST00000495497 CASP8Q14790 479 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms