RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 KCTD4Q8WVF5 259 aa8.36□□□□□ -1.07
ITGB1-217ENST00000494395 MR1Q95460 341 aa8.36□□□□□ -1.07
ITGB1-217ENST00000494395 MED8Q96G25 268 aa8.36□□□□□ -1.07
ITGB1-217ENST00000494395 WBP1Q96G27 269 aa8.36□□□□□ -1.07
ITGB1-217ENST00000494395 PRAP1Q96NZ9 151 aa8.36□□□□□ -1.07
ITGB1-217ENST00000494395 GPR78Q96P69 363 aa8.36□□□□□ -1.07
ITGB1-217ENST00000494395 HAUS8Q9BT25 410 aa8.36□□□□□ -1.07
ITGB1-217ENST00000494395 SNX15Q9NRS6 342 aa8.36□□□□□ -1.07
ITGB1-217ENST00000494395 STARD5Q9NSY2 213 aa8.36□□□□□ -1.07
ITGB1-217ENST00000494395 CUTCQ9NTM9 273 aa8.36□□□□□ -1.07
ITGB1-217ENST00000494395 PTBP2Q9UKA9 531 aaKnown RBP8.36□□□□□ -1.07
ITGB1-217ENST00000494395 FARSAQ9Y285 508 aaKnown RBP8.36□□□□□ -1.07
ITGB1-217ENST00000494395 MED13Q9UHV7 2174 aa8.36□□□□□ -1.07
ITGB1-217ENST00000494395 IGSF10Q6WRI0 2623 aa8.36□□□□□ -1.07
ITGB1-217ENST00000494395 BSNQ9UPA5 3926 aa8.35□□□□□ -1.07
ITGB1-217ENST00000494395 KCNE1BA0A087WTH5 132 aa8.35□□□□□ -1.07
ITGB1-217ENST00000494395 A0A087X1B8 175 aa8.35□□□□□ -1.07
ITGB1-217ENST00000494395 FEZF1A0PJY2 475 aa8.35□□□□□ -1.07
ITGB1-217ENST00000494395 LCMT2O60294 686 aaKnown RBP8.35□□□□□ -1.07
ITGB1-217ENST00000494395 PRAMEF4O60810 478 aa8.35□□□□□ -1.07
ITGB1-217ENST00000494395 KLF7O75840 302 aaPredicted RBP8.35□□□□□ -1.07
ITGB1-217ENST00000494395 INHBAP08476 426 aa8.35□□□□□ -1.07
ITGB1-217ENST00000494395 LTA4HP09960 611 aaKnown RBP8.35□□□□□ -1.07
ITGB1-217ENST00000494395 PRKAR1AP10644 381 aa8.35□□□□□ -1.07
ITGB1-217ENST00000494395 MTHFD2P13995 350 aa8.35□□□□□ -1.07
ITGB1-217ENST00000494395 ACPPP15309 386 aa8.35□□□□□ -1.07
ITGB1-217ENST00000494395 TFEBP19484 476 aa8.35□□□□□ -1.07
ITGB1-217ENST00000494395 BCL6P41182 706 aa8.35□□□□□ -1.07
ITGB1-217ENST00000494395 SERPINB8P50452 374 aa8.35□□□□□ -1.07
ITGB1-217ENST00000494395 SERPINB9P50453 376 aa8.35□□□□□ -1.07
ITGB1-217ENST00000494395 PMS2P54278 862 aa8.35□□□□□ -1.07
ITGB1-217ENST00000494395 RPS15AP62244 130 aaKnown RBP8.35□□□□□ -1.07
ITGB1-217ENST00000494395 DCDP81605 110 aaKnown RBP8.35□□□□□ -1.07
ITGB1-217ENST00000494395 MC1RQ01726 317 aa8.35□□□□□ -1.07
ITGB1-217ENST00000494395 NCF4Q15080 339 aa8.35□□□□□ -1.07
ITGB1-217ENST00000494395 UGT8Q16880 541 aa8.35□□□□□ -1.07
ITGB1-217ENST00000494395 HKDC1Q2TB90 917 aa8.35□□□□□ -1.07
ITGB1-217ENST00000494395 NKAIN1Q4KMZ8 207 aa8.35□□□□□ -1.07
ITGB1-217ENST00000494395 SOWAHCQ53LP3 525 aaPredicted RBP8.35□□□□□ -1.07
ITGB1-217ENST00000494395 CATSPEREQ5SY80 951 aa8.35□□□□□ -1.07
ITGB1-217ENST00000494395 ZNF468Q5VIY5 522 aaPredicted RBP8.35□□□□□ -1.07
ITGB1-217ENST00000494395 C1orf189Q5VU69 101 aa8.35□□□□□ -1.07
ITGB1-217ENST00000494395 FAM69BQ5VUD6 431 aa8.35□□□□□ -1.07
ITGB1-217ENST00000494395 PRAMEF9Q5VWM5 478 aa8.35□□□□□ -1.07
ITGB1-217ENST00000494395 TTLL10Q6ZVT0 673 aa8.35□□□□□ -1.07
ITGB1-217ENST00000494395 SYVN1Q86TM6 617 aa8.35□□□□□ -1.07
ITGB1-217ENST00000494395 THOC6Q86W42 341 aaKnown RBP8.35□□□□□ -1.07
ITGB1-217ENST00000494395 GPSM1Q86YR5 675 aa8.35□□□□□ -1.07
ITGB1-217ENST00000494395 ENDOVQ8N8Q3 282 aaKnown RBP8.35□□□□□ -1.07
ITGB1-217ENST00000494395 LSM14AQ8ND56 463 aaKnown RBP8.35□□□□□ -1.07
ITGB1-217ENST00000494395 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.35□□□□□ -1.07
ITGB1-217ENST00000494395 EXTL1Q92935 676 aa8.35□□□□□ -1.07
ITGB1-217ENST00000494395 NEIL2Q969S2 332 aa8.35□□□□□ -1.07
ITGB1-217ENST00000494395 FKBP10Q96AY3 582 aa8.35□□□□□ -1.07
ITGB1-217ENST00000494395 NXNL1Q96CM4 212 aa8.35□□□□□ -1.07
ITGB1-217ENST00000494395 TM4SF19Q96DZ7 209 aa8.35□□□□□ -1.07
ITGB1-217ENST00000494395 NDC1Q9BTX1 674 aa8.35□□□□□ -1.07
ITGB1-217ENST00000494395 SLC7A5P2Q9GIP4 190 aa8.35□□□□□ -1.07
ITGB1-217ENST00000494395 SLC26A1Q9H2B4 701 aa8.35□□□□□ -1.07
ITGB1-217ENST00000494395 SPNS1Q9H2V7 528 aa8.35□□□□□ -1.07
ITGB1-217ENST00000494395 TXLNGQ9NUQ3 528 aa8.35□□□□□ -1.07
ITGB1-217ENST00000494395 ABCF3Q9NUQ8 709 aa8.35□□□□□ -1.07
ITGB1-217ENST00000494395 TCFL5Q9UL49 500 aa8.35□□□□□ -1.07
ITGB1-217ENST00000494395 RUVBL1Q9Y265 456 aaKnown RBP8.35□□□□□ -1.07
ITGB1-217ENST00000494395 ASB1Q9Y576 335 aa8.35□□□□□ -1.07
ITGB1-217ENST00000494395 SCN3AQ9NY46 2000 aa8.34□□□□□ -1.07
ITGB1-217ENST00000494395 IGLV3-12A0A075B6K2 115 aa8.34□□□□□ -1.07
ITGB1-217ENST00000494395 TRBC2A0A5B9 178 aa8.34□□□□□ -1.07
ITGB1-217ENST00000494395 CCDC189A1A4V9 331 aa8.34□□□□□ -1.07
ITGB1-217ENST00000494395 HYKKA2RU49 373 aa8.34□□□□□ -1.07
ITGB1-217ENST00000494395 NCF1BA6NI72 391 aaPredicted RBP8.34□□□□□ -1.07
ITGB1-217ENST00000494395 NCF1CA8MVU1 366 aaPredicted RBP8.34□□□□□ -1.07
ITGB1-217ENST00000494395 FOXS1O43638 330 aa8.34□□□□□ -1.07
ITGB1-217ENST00000494395 KERAO60938 352 aa8.34□□□□□ -1.07
ITGB1-217ENST00000494395 KATNA1O75449 491 aa8.34□□□□□ -1.07
ITGB1-217ENST00000494395 KLHL2O95198 593 aa8.34□□□□□ -1.07
ITGB1-217ENST00000494395 NCF1P14598 390 aaPredicted RBP8.34□□□□□ -1.07
ITGB1-217ENST00000494395 EPORP19235 508 aa8.34□□□□□ -1.07
ITGB1-217ENST00000494395 AGXTP21549 392 aa8.34□□□□□ -1.07
ITGB1-217ENST00000494395 CNTFP26441 200 aa8.34□□□□□ -1.07
ITGB1-217ENST00000494395 GDF5P43026 501 aa8.34□□□□□ -1.07
ITGB1-217ENST00000494395 FOXL2P58012 376 aa8.34□□□□□ -1.07
ITGB1-217ENST00000494395 RPS15P62841 145 aaKnown RBP8.34□□□□□ -1.07
ITGB1-217ENST00000494395 REEP5Q00765 189 aa8.34□□□□□ -1.07
ITGB1-217ENST00000494395 MEF2AQ02078 507 aaPredicted RBP8.34□□□□□ -1.07
ITGB1-217ENST00000494395 E2F2Q14209 437 aa8.34□□□□□ -1.07
ITGB1-217ENST00000494395 ERV3-1Q14264 604 aa8.34□□□□□ -1.07
ITGB1-217ENST00000494395 SLC29A2Q14542 456 aa8.34□□□□□ -1.07
ITGB1-217ENST00000494395 SLC9A5Q14940 896 aa8.34□□□□□ -1.07
ITGB1-217ENST00000494395 UAP1Q16222 522 aaPredicted RBP8.34□□□□□ -1.07
ITGB1-217ENST00000494395 MUM1Q2TAK8 710 aa8.34□□□□□ -1.07
ITGB1-217ENST00000494395 FAM214AQ32MH5 1076 aa8.34□□□□□ -1.07
ITGB1-217ENST00000494395 TECRLQ5HYJ1 363 aa8.34□□□□□ -1.07
ITGB1-217ENST00000494395 GARNL3Q5VVW2 1013 aa8.34□□□□□ -1.07
ITGB1-217ENST00000494395 SULT1C3Q6IMI6 304 aa8.34□□□□□ -1.07
ITGB1-217ENST00000494395 RAPH1Q70E73 1250 aa8.34□□□□□ -1.07
ITGB1-217ENST00000494395 FRA10AC1Q70Z53 315 aa8.34□□□□□ -1.07
ITGB1-217ENST00000494395 ADCK2Q7Z695 626 aa8.34□□□□□ -1.07
ITGB1-217ENST00000494395 TBC1D1Q86TI0 1168 aaPredicted RBP8.34□□□□□ -1.07
ITGB1-217ENST00000494395 PLD6Q8N2A8 252 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms