RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 FGD3Q5JSP0 725 aa3.47□□□□□ -1.85
ITGB1-216ENST00000493758 SPECC1Q5M775 1068 aa3.47□□□□□ -1.85
ITGB1-216ENST00000493758 CHMP1BQ7LBR1 199 aa3.47□□□□□ -1.85
ITGB1-216ENST00000493758 TIGD4Q8IY51 512 aa3.47□□□□□ -1.85
ITGB1-216ENST00000493758 PRSS35Q8N3Z0 413 aa3.47□□□□□ -1.85
ITGB1-216ENST00000493758 ANKRD13CQ8N6S4 541 aa3.47□□□□□ -1.85
ITGB1-216ENST00000493758 GBP7Q8N8V2 638 aaPredicted RBP3.47□□□□□ -1.85
ITGB1-216ENST00000493758 SLC26A7Q8TE54 656 aa3.47□□□□□ -1.85
ITGB1-216ENST00000493758 NPRL2Q8WTW4 380 aa3.47□□□□□ -1.85
ITGB1-216ENST00000493758 MRPS27Q92552 414 aaKnown RBP3.47□□□□□ -1.85
ITGB1-216ENST00000493758 RAD54LQ92698 747 aa3.47□□□□□ -1.85
ITGB1-216ENST00000493758 RASL10AQ92737 203 aa3.47□□□□□ -1.85
ITGB1-216ENST00000493758 SECISBP2LQ93073 1101 aaKnown RBP3.47□□□□□ -1.85
ITGB1-216ENST00000493758 C11orf52Q96A22 123 aa3.47□□□□□ -1.85
ITGB1-216ENST00000493758 CNRIP1Q96F85 164 aaPredicted RBP3.47□□□□□ -1.85
ITGB1-216ENST00000493758 ATXN7L3BQ96GX2 97 aa3.47□□□□□ -1.85
ITGB1-216ENST00000493758 RAB11FIP5Q9BXF6 653 aa3.47□□□□□ -1.85
ITGB1-216ENST00000493758 PKD2L2Q9NZM6 624 aa3.47□□□□□ -1.85
ITGB1-216ENST00000493758 NPHP3Q7Z494 1330 aa3.46□□□□□ -1.85
ITGB1-216ENST00000493758 MYH14Q7Z406 1995 aaKnown RBP3.46□□□□□ -1.86
ITGB1-216ENST00000493758 A0A087WZ39 114 aa3.46□□□□□ -1.86
ITGB1-216ENST00000493758 IGHV3-38A0A0C4DH36 116 aa3.46□□□□□ -1.86
ITGB1-216ENST00000493758 SAP30O75446 220 aa3.46□□□□□ -1.86
ITGB1-216ENST00000493758 HPRP00739 348 aa3.46□□□□□ -1.86
ITGB1-216ENST00000493758 KRT3P12035 628 aa3.46□□□□□ -1.86
ITGB1-216ENST00000493758 PTAFRP25105 342 aa3.46□□□□□ -1.86
ITGB1-216ENST00000493758 PIK3R1P27986 724 aa3.46□□□□□ -1.86
ITGB1-216ENST00000493758 GMPSP49915 693 aaPredicted RBP3.46□□□□□ -1.86
ITGB1-216ENST00000493758 CLDN17P56750 224 aa3.46□□□□□ -1.86
ITGB1-216ENST00000493758 CDO1Q16878 200 aa3.46□□□□□ -1.86
ITGB1-216ENST00000493758 MS4A18Q3C1V0 323 aa3.46□□□□□ -1.86
ITGB1-216ENST00000493758 SPOUT1Q5T280 376 aaKnown RBP3.46□□□□□ -1.86
ITGB1-216ENST00000493758 OR4C11Q6IEV9 310 aa3.46□□□□□ -1.86
ITGB1-216ENST00000493758 PPP1R21Q6ZMI0 780 aa3.46□□□□□ -1.86
ITGB1-216ENST00000493758 C11orf57Q6ZUT1 292 aaPredicted RBP3.46□□□□□ -1.86
ITGB1-216ENST00000493758 NRARPQ7Z6K4 114 aa3.46□□□□□ -1.86
ITGB1-216ENST00000493758 SLC47A2Q86VL8 602 aa3.46□□□□□ -1.86
ITGB1-216ENST00000493758 FAM131BQ86XD5 332 aa3.46□□□□□ -1.86
ITGB1-216ENST00000493758 LMNTD2Q8IXW0 634 aa3.46□□□□□ -1.86
ITGB1-216ENST00000493758 POM121L12Q8N7R1 296 aa3.46□□□□□ -1.86
ITGB1-216ENST00000493758 IQUBQ8NA54 791 aa3.46□□□□□ -1.86
ITGB1-216ENST00000493758 FER1L6-AS2Q96M78 137 aa3.46□□□□□ -1.86
ITGB1-216ENST00000493758 ATF6BQ99941 703 aa3.46□□□□□ -1.86
ITGB1-216ENST00000493758 CENPOQ9BU64 300 aa3.46□□□□□ -1.86
ITGB1-216ENST00000493758 TUBB1Q9H4B7 451 aa3.46□□□□□ -1.86
ITGB1-216ENST00000493758 HACD3Q9P035 362 aa3.46□□□□□ -1.86
ITGB1-216ENST00000493758 NFKBIL1Q9UBC1 381 aaPredicted RBP3.46□□□□□ -1.86
ITGB1-216ENST00000493758 SNX7Q9UNH6 387 aa3.46□□□□□ -1.86
ITGB1-216ENST00000493758 BCL2L11O43521 198 aa3.45□□□□□ -1.86
ITGB1-216ENST00000493758 DKC1O60832 514 aaKnown RBP eCLIP3.45□□□□□ -1.86
ITGB1-216ENST00000493758 SPP1P10451 314 aa3.45□□□□□ -1.86
ITGB1-216ENST00000493758 TCF4P15884 667 aa3.45□□□□□ -1.86
ITGB1-216ENST00000493758 ADRA2CP18825 462 aa3.45□□□□□ -1.86
ITGB1-216ENST00000493758 DUTP33316 252 aaKnown RBP3.45□□□□□ -1.86
ITGB1-216ENST00000493758 RGS19P49795 217 aa3.45□□□□□ -1.86
ITGB1-216ENST00000493758 NDST2P52849 883 aa3.45□□□□□ -1.86
ITGB1-216ENST00000493758 TAZQ16635 292 aa3.45□□□□□ -1.86
ITGB1-216ENST00000493758 UPP1Q16831 310 aa3.45□□□□□ -1.86
ITGB1-216ENST00000493758 FAM106AQ4KMX7 169 aa3.45□□□□□ -1.86
ITGB1-216ENST00000493758 TXNRD3NBQ6F5E7 133 aa3.45□□□□□ -1.86
ITGB1-216ENST00000493758 CYB5D1Q6P9G0 228 aa3.45□□□□□ -1.86
ITGB1-216ENST00000493758 SPAG16Q8N0X2 631 aa3.45□□□□□ -1.86
ITGB1-216ENST00000493758 CCDC89Q8N998 374 aa3.45□□□□□ -1.86
ITGB1-216ENST00000493758 OR4C15Q8NGM1 316 aa3.45□□□□□ -1.86
ITGB1-216ENST00000493758 OR2L2Q8NH16 312 aa3.45□□□□□ -1.86
ITGB1-216ENST00000493758 KIF18AQ8NI77 898 aa3.45□□□□□ -1.86
ITGB1-216ENST00000493758 OCC1Q8TAD7 63 aa3.45□□□□□ -1.86
ITGB1-216ENST00000493758 CNDP2Q96KP4 475 aaKnown RBP3.45□□□□□ -1.86
ITGB1-216ENST00000493758 RNF121Q9H920 327 aa3.45□□□□□ -1.86
ITGB1-216ENST00000493758 LMAN1LQ9HAT1 526 aa3.45□□□□□ -1.86
ITGB1-216ENST00000493758 GNB4Q9HAV0 340 aa3.45□□□□□ -1.86
ITGB1-216ENST00000493758 THAP10Q9P2Z0 257 aaPredicted RBP3.45□□□□□ -1.86
ITGB1-216ENST00000493758 CFDP1Q9UEE9 299 aaPredicted RBP3.45□□□□□ -1.86
ITGB1-216ENST00000493758 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.45□□□□□ -1.86
ITGB1-216ENST00000493758 ZNF510Q9Y2H8 683 aa3.45□□□□□ -1.86
ITGB1-216ENST00000493758 TP53BP1Q12888 1972 aaPredicted RBP3.44□□□□□ -1.86
ITGB1-216ENST00000493758 IGLV4-3A0A075B6K6 122 aa3.44□□□□□ -1.86
ITGB1-216ENST00000493758 IQCMA0A1B0GVH7 501 aa3.44□□□□□ -1.86
ITGB1-216ENST00000493758 MTRF1O75570 445 aaKnown RBP3.44□□□□□ -1.86
ITGB1-216ENST00000493758 C4BPBP20851 252 aa3.44□□□□□ -1.86
ITGB1-216ENST00000493758 IL4RP24394 825 aa3.44□□□□□ -1.86
ITGB1-216ENST00000493758 TIA1P31483 386 aaKnown RBP eCLIP3.44□□□□□ -1.86
ITGB1-216ENST00000493758 KRT20P35900 424 aa3.44□□□□□ -1.86
ITGB1-216ENST00000493758 OR3A3P47888 321 aa3.44□□□□□ -1.86
ITGB1-216ENST00000493758 IL10RBQ08334 325 aa3.44□□□□□ -1.86
ITGB1-216ENST00000493758 CAMK2DQ13557 499 aa3.44□□□□□ -1.86
ITGB1-216ENST00000493758 GRB14Q14449 540 aa3.44□□□□□ -1.86
ITGB1-216ENST00000493758 KCTD2Q14681 263 aa3.44□□□□□ -1.86
ITGB1-216ENST00000493758 TWISTNBQ3B726 338 aaPredicted RBP3.44□□□□□ -1.86
ITGB1-216ENST00000493758 FAM166AQ6J272 317 aa3.44□□□□□ -1.86
ITGB1-216ENST00000493758 ZNF774Q6NX45 483 aa3.44□□□□□ -1.86
ITGB1-216ENST00000493758 TTC27Q6P3X3 843 aa3.44□□□□□ -1.86
ITGB1-216ENST00000493758 FUT10Q6P4F1 479 aa3.44□□□□□ -1.86
ITGB1-216ENST00000493758 PRUNE1Q86TP1 453 aa3.44□□□□□ -1.86
ITGB1-216ENST00000493758 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.44□□□□□ -1.86
ITGB1-216ENST00000493758 RBM41Q96IZ5 413 aaKnown RBP3.44□□□□□ -1.86
ITGB1-216ENST00000493758 C1orf147Q96MC9 270 aaPredicted RBP3.44□□□□□ -1.86
ITGB1-216ENST00000493758 PSMB7Q99436 277 aa3.44□□□□□ -1.86
ITGB1-216ENST00000493758 SOSTQ9BQB4 213 aa3.44□□□□□ -1.86
ITGB1-216ENST00000493758 GTPBP2Q9BX10 602 aaKnown RBP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms