RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 CELF2O95319 508 aaKnown RBP6.65□□□□□ -1.35
VPS13B-205ENST00000493587 ITGB1P05556 798 aa6.65□□□□□ -1.35
VPS13B-205ENST00000493587 MYL3P08590 195 aa6.65□□□□□ -1.35
VPS13B-205ENST00000493587 C6P13671 934 aa6.65□□□□□ -1.35
VPS13B-205ENST00000493587 HLA-EP13747 358 aa6.65□□□□□ -1.35
VPS13B-205ENST00000493587 ARSAP15289 507 aa6.65□□□□□ -1.35
VPS13B-205ENST00000493587 NFKB1P19838 968 aa6.65□□□□□ -1.35
VPS13B-205ENST00000493587 CHRM3P20309 590 aa6.65□□□□□ -1.35
VPS13B-205ENST00000493587 STOMP27105 288 aa6.65□□□□□ -1.35
VPS13B-205ENST00000493587 FRG1Q14331 258 aaKnown RBP6.65□□□□□ -1.35
VPS13B-205ENST00000493587 IRF4Q15306 451 aa6.65□□□□□ -1.35
VPS13B-205ENST00000493587 ZSWIM7Q19AV6 140 aa6.65□□□□□ -1.35
VPS13B-205ENST00000493587 SLC35F1Q5T1Q4 408 aa6.65□□□□□ -1.35
VPS13B-205ENST00000493587 BICRALQ6AI39 1079 aa6.65□□□□□ -1.35
VPS13B-205ENST00000493587 TCEAL6Q6IPX3 200 aa6.65□□□□□ -1.35
VPS13B-205ENST00000493587 DNAJC24Q6P3W2 148 aa6.65□□□□□ -1.35
VPS13B-205ENST00000493587 CUZD1Q86UP6 607 aa6.65□□□□□ -1.35
VPS13B-205ENST00000493587 ATPAF2Q8N5M1 289 aa6.65□□□□□ -1.35
VPS13B-205ENST00000493587 LPCAT1Q8NF37 534 aa6.65□□□□□ -1.35
VPS13B-205ENST00000493587 ELP5Q8TE02 316 aa6.65□□□□□ -1.35
VPS13B-205ENST00000493587 EDARADDQ8WWZ3 215 aa6.65□□□□□ -1.35
VPS13B-205ENST00000493587 PEX11GQ96HA9 241 aa6.65□□□□□ -1.35
VPS13B-205ENST00000493587 MCEEQ96PE7 176 aa6.65□□□□□ -1.35
VPS13B-205ENST00000493587 SLC38A3Q99624 504 aa6.65□□□□□ -1.35
VPS13B-205ENST00000493587 RBM4BQ9BQ04 359 aaKnown RBP6.65□□□□□ -1.35
VPS13B-205ENST00000493587 RBM4Q9BWF3 364 aaKnown RBP6.65□□□□□ -1.35
VPS13B-205ENST00000493587 HDHD2Q9H0R4 259 aa6.65□□□□□ -1.35
VPS13B-205ENST00000493587 REEP4Q9H6H4 257 aa6.65□□□□□ -1.35
VPS13B-205ENST00000493587 DDX31Q9H8H2 851 aaKnown RBP6.65□□□□□ -1.35
VPS13B-205ENST00000493587 AGPAT3Q9NRZ7 376 aa6.65□□□□□ -1.35
VPS13B-205ENST00000493587 RBAKQ9NYW8 714 aaPredicted RBP6.65□□□□□ -1.35
VPS13B-205ENST00000493587 USP22Q9UPT9 525 aa6.65□□□□□ -1.35
VPS13B-205ENST00000493587 BRCA2P51587 3418 aa6.65□□□□□ -1.35
VPS13B-205ENST00000493587 A0A0U1RQS6 177 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 C1orf196B1AJZ1 125 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 HRO43593 1189 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 H2AFYO75367 372 aaKnown RBP6.64□□□□□ -1.35
VPS13B-205ENST00000493587 RGS11O94810 467 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 PRAMEF1O95521 474 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 AGR2O95994 175 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 MOCS2O96007 188 aaPredicted RBP6.64□□□□□ -1.35
VPS13B-205ENST00000493587 LALBAP00709 142 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 F7P08709 466 aaPredicted RBP6.64□□□□□ -1.35
VPS13B-205ENST00000493587 SLC2A2P11168 524 aaPredicted RBP6.64□□□□□ -1.35
VPS13B-205ENST00000493587 ITGB5P18084 799 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 HOXA13P31271 388 aaPredicted RBP6.64□□□□□ -1.35
VPS13B-205ENST00000493587 CARD18P57730 90 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 DSC2Q02487 901 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 LIPEQ05469 1076 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 PTP4A2Q12974 167 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 MICAQ29983 383 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 RNF212Q495C1 297 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 ACER2Q5QJU3 275 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 ANKRD34AQ69YU3 496 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 LCN8Q6JVE9 175 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 ARMC6Q6NXE6 501 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 CLEC2AQ6UVW9 174 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 C16orf54Q6UWD8 224 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 C3P1Q6ZMU1 363 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 OVCH2Q7RTZ1 564 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 TRMT1LQ7Z2T5 733 aaKnown RBP6.64□□□□□ -1.35
VPS13B-205ENST00000493587 FAM71AQ8IYT1 594 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 ENTHD1Q8IYW4 607 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 OR10H5Q8NGA6 315 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 FEZF2Q8TBJ5 459 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 WDR20Q8TBZ3 569 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 OTUB1Q96FW1 271 aaPredicted RBP6.64□□□□□ -1.35
VPS13B-205ENST00000493587 LRCH3Q96II8 777 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 SIGLEC10Q96LC7 697 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 P2RY13Q9BPV8 354 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 AMBRA1Q9C0C7 1298 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 OPN3Q9H1Y3 402 aaPredicted RBP6.64□□□□□ -1.35
VPS13B-205ENST00000493587 POPDC2Q9HBU9 364 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 CASS4Q9NQ75 786 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 ABCC13Q9NSE7 274 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 WASF3Q9UPY6 502 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 SLC6A5Q9Y345 797 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 FAM221BA6H8Z2 402 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 MYO1GB0I1T2 1018 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 GRID2O43424 1007 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 SSNA1O43805 119 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 USP2O75604 605 aaPredicted RBP6.64□□□□□ -1.35
VPS13B-205ENST00000493587 TSPAN12O95859 305 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 MAPTP10636 758 aaKnown RBP6.64□□□□□ -1.35
VPS13B-205ENST00000493587 NPR2P20594 1047 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 LHCGRP22888 699 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 ATP5F1P24539 256 aaPredicted RBP6.64□□□□□ -1.35
VPS13B-205ENST00000493587 PRKCHP24723 683 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 PTGFRP43088 359 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 GSK3BP49841 420 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 TSPAN5P62079 268 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 MEF2AQ02078 507 aaPredicted RBP6.64□□□□□ -1.35
VPS13B-205ENST00000493587 FADDQ13158 208 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 PRKG2Q13237 762 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 ASAH1Q13510 395 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 CUL2Q13617 745 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 GTF2H3Q13889 308 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 SERTAD2Q14140 314 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 GK2Q14410 553 aaPredicted RBP6.64□□□□□ -1.35
VPS13B-205ENST00000493587 GANABQ14697 944 aaKnown RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms