RNA–Protein interactions for RNA: ENST00000491502.1

NUP188-208, Transcript of nucleoporin 188, humanhuman

TSL 3

Gene NUP188, Length 534 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-208ENST00000491502 CCR8P51685 355 aa12.96□□□□□ -0.33
NUP188-208ENST00000491502 ERVK-8P63133 956 aa12.96□□□□□ -0.33
NUP188-208ENST00000491502 E2F2Q14209 437 aa12.96□□□□□ -0.33
NUP188-208ENST00000491502 HERC3Q15034 1050 aa12.96□□□□□ -0.33
NUP188-208ENST00000491502 PLCL1Q15111 1095 aa12.96□□□□□ -0.33
NUP188-208ENST00000491502 NR6A1Q15406 480 aa12.96□□□□□ -0.33
NUP188-208ENST00000491502 AMZ1Q400G9 498 aa12.96□□□□□ -0.33
NUP188-208ENST00000491502 C3orf38Q5JPI3 329 aa12.96□□□□□ -0.33
NUP188-208ENST00000491502 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.96□□□□□ -0.33
NUP188-208ENST00000491502 CACHD1Q5VU97 1274 aa12.96□□□□□ -0.33
NUP188-208ENST00000491502 KLHL35Q6PF15 583 aa12.96□□□□□ -0.33
NUP188-208ENST00000491502 SLCO4C1Q6ZQN7 724 aa12.96□□□□□ -0.33
NUP188-208ENST00000491502 TMPRSS11BQ86T26 416 aa12.96□□□□□ -0.33
NUP188-208ENST00000491502 AMIGO1Q86WK6 493 aa12.96□□□□□ -0.33
NUP188-208ENST00000491502 FNDC5Q8NAU1 212 aa12.96□□□□□ -0.33
NUP188-208ENST00000491502 PPFIBP2Q8ND30 876 aa12.96□□□□□ -0.33
NUP188-208ENST00000491502 SLC37A2Q8TED4 501 aa12.96□□□□□ -0.33
NUP188-208ENST00000491502 SRMSQ9H3Y6 488 aa12.96□□□□□ -0.33
NUP188-208ENST00000491502 BRF2Q9HAW0 419 aa12.96□□□□□ -0.33
NUP188-208ENST00000491502 ATXN7L1Q9ULK2 861 aaPredicted RBP12.96□□□□□ -0.33
NUP188-208ENST00000491502 SLC12A4Q9UP95 1085 aa12.96□□□□□ -0.33
NUP188-208ENST00000491502 TMED5Q9Y3A6 229 aa12.96□□□□□ -0.33
NUP188-208ENST00000491502 IGHV1OR21-1A0A087WYE8 117 aa12.95□□□□□ -0.34
NUP188-208ENST00000491502 CAPN14A8MX76 684 aa12.95□□□□□ -0.34
NUP188-208ENST00000491502 PLD2O14939 933 aa12.95□□□□□ -0.34
NUP188-208ENST00000491502 PEX11AO75192 247 aa12.95□□□□□ -0.34
NUP188-208ENST00000491502 MYO1DO94832 1006 aa12.95□□□□□ -0.34
NUP188-208ENST00000491502 JUNP05412 331 aaKnown RBP12.95□□□□□ -0.34
NUP188-208ENST00000491502 GSTM2P28161 218 aa12.95□□□□□ -0.34
NUP188-208ENST00000491502 CD1CP29017 333 aa12.95□□□□□ -0.34
NUP188-208ENST00000491502 CMPK1P30085 196 aa12.95□□□□□ -0.34
NUP188-208ENST00000491502 EIF2S3P41091 472 aaKnown RBP12.95□□□□□ -0.34
NUP188-208ENST00000491502 PDX1P52945 283 aa12.95□□□□□ -0.34
NUP188-208ENST00000491502 HHEXQ03014 270 aa12.95□□□□□ -0.34
NUP188-208ENST00000491502 EMX2Q04743 252 aa12.95□□□□□ -0.34
NUP188-208ENST00000491502 PRDX1Q06830 199 aaKnown RBP12.95□□□□□ -0.34
NUP188-208ENST00000491502 KLF10Q13118 480 aa12.95□□□□□ -0.34
NUP188-208ENST00000491502 TRA2AQ13595 282 aaKnown RBP eCLIP12.95□□□□□ -0.34
NUP188-208ENST00000491502 KIR2DS3Q14952 304 aa12.95□□□□□ -0.34
NUP188-208ENST00000491502 ABRAXAS2Q15018 415 aa12.95□□□□□ -0.34
NUP188-208ENST00000491502 ZXDCQ2QGD7 858 aaPredicted RBP12.95□□□□□ -0.34
NUP188-208ENST00000491502 DUS1LQ6P1R4 473 aaKnown RBP12.95□□□□□ -0.34
NUP188-208ENST00000491502 SUSD1Q6UWL2 747 aa12.95□□□□□ -0.34
NUP188-208ENST00000491502 USP53Q70EK8 1073 aa12.95□□□□□ -0.34
NUP188-208ENST00000491502 RAB11FIP2Q7L804 512 aa12.95□□□□□ -0.34
NUP188-208ENST00000491502 B3GNT8Q7Z7M8 397 aa12.95□□□□□ -0.34
NUP188-208ENST00000491502 MIER2Q8N344 545 aa12.95□□□□□ -0.34
NUP188-208ENST00000491502 ZNF248Q8NDW4 579 aa12.95□□□□□ -0.34
NUP188-208ENST00000491502 TTLQ8NG68 377 aa12.95□□□□□ -0.34
NUP188-208ENST00000491502 OR10G6Q8NH81 332 aa12.95□□□□□ -0.34
NUP188-208ENST00000491502 RP9Q8TA86 221 aaKnown RBP12.95□□□□□ -0.34
NUP188-208ENST00000491502 NEIL2Q969S2 332 aa12.95□□□□□ -0.34
NUP188-208ENST00000491502 AHCYL2Q96HN2 611 aaKnown RBP12.95□□□□□ -0.34
NUP188-208ENST00000491502 CATSPER2Q96P56 530 aa12.95□□□□□ -0.34
NUP188-208ENST00000491502 IL17FQ96PD4 163 aa12.95□□□□□ -0.34
NUP188-208ENST00000491502 OR4K3Q96R72 315 aa12.95□□□□□ -0.34
NUP188-208ENST00000491502 TUBB1Q9H4B7 451 aa12.95□□□□□ -0.34
NUP188-208ENST00000491502 EPB41L1Q9H4G0 881 aa12.95□□□□□ -0.34
NUP188-208ENST00000491502 NT5DC2Q9H857 520 aa12.95□□□□□ -0.34
NUP188-208ENST00000491502 C1orf109Q9NX04 203 aa12.95□□□□□ -0.34
NUP188-208ENST00000491502 NDE1Q9NXR1 346 aa12.95□□□□□ -0.34
NUP188-208ENST00000491502 NOP53Q9NZM5 478 aaKnown RBP12.95□□□□□ -0.34
NUP188-208ENST00000491502 ARMCX1Q9P291 453 aa12.95□□□□□ -0.34
NUP188-208ENST00000491502 CPNE7Q9UBL6 633 aa12.95□□□□□ -0.34
NUP188-208ENST00000491502 CIDEBQ9UHD4 219 aa12.95□□□□□ -0.34
NUP188-208ENST00000491502 TAC3Q9UHF0 121 aa12.95□□□□□ -0.34
NUP188-208ENST00000491502 PLAGL1Q9UM63 463 aa12.95□□□□□ -0.34
NUP188-208ENST00000491502 TSC22D4Q9Y3Q8 395 aa12.95□□□□□ -0.34
NUP188-208ENST00000491502 COL27A1Q8IZC6 1860 aaPredicted RBP12.95□□□□□ -0.34
NUP188-208ENST00000491502 ASPMQ8IZT6 3477 aa12.94□□□□□ -0.34
NUP188-208ENST00000491502 KCNE1BA0A087WTH5 132 aa12.94□□□□□ -0.34
NUP188-208ENST00000491502 A0A1B0GTL3 188 aa12.94□□□□□ -0.34
NUP188-208ENST00000491502 ATP6AP2A0A1C7CYW4 349 aa12.94□□□□□ -0.34
NUP188-208ENST00000491502 DYTNA2CJ06 578 aa12.94□□□□□ -0.34
NUP188-208ENST00000491502 CFAP73A6NFT4 308 aa12.94□□□□□ -0.34
NUP188-208ENST00000491502 NPIPB8E9PQR5 432 aa12.94□□□□□ -0.34
NUP188-208ENST00000491502 PSMD12O00232 456 aaPredicted RBP12.94□□□□□ -0.34
NUP188-208ENST00000491502 FOXE1O00358 373 aaPredicted RBP12.94□□□□□ -0.34
NUP188-208ENST00000491502 CASC3O15234 703 aaKnown RBP12.94□□□□□ -0.34
NUP188-208ENST00000491502 TLX3O43711 291 aaPredicted RBP12.94□□□□□ -0.34
NUP188-208ENST00000491502 ATP6AP2O75787 350 aa12.94□□□□□ -0.34
NUP188-208ENST00000491502 EML2O95834 649 aa12.94□□□□□ -0.34
NUP188-208ENST00000491502 PRR35P0CG20 571 aa12.94□□□□□ -0.34
NUP188-208ENST00000491502 ACPPP15309 386 aa12.94□□□□□ -0.34
NUP188-208ENST00000491502 PRPH2P23942 346 aa12.94□□□□□ -0.34
NUP188-208ENST00000491502 SLC19A1P41440 591 aa12.94□□□□□ -0.34
NUP188-208ENST00000491502 PIK3CBP42338 1070 aa12.94□□□□□ -0.34
NUP188-208ENST00000491502 SCTRP47872 440 aa12.94□□□□□ -0.34
NUP188-208ENST00000491502 MRPL19P49406 292 aaKnown RBP12.94□□□□□ -0.34
NUP188-208ENST00000491502 EPHA4P54764 986 aa12.94□□□□□ -0.34
NUP188-208ENST00000491502 PCBP4P57723 403 aaKnown RBP12.94□□□□□ -0.34
NUP188-208ENST00000491502 STX5Q13190 355 aa12.94□□□□□ -0.34
NUP188-208ENST00000491502 CYLC2Q14093 348 aaPredicted RBP12.94□□□□□ -0.34
NUP188-208ENST00000491502 UBAP2LQ14157 1087 aaKnown RBP12.94□□□□□ -0.34
NUP188-208ENST00000491502 FASTKQ14296 549 aaKnown RBP12.94□□□□□ -0.34
NUP188-208ENST00000491502 AP5B1Q2VPB7 878 aa12.94□□□□□ -0.34
NUP188-208ENST00000491502 SGO1Q5FBB7 561 aa12.94□□□□□ -0.34
NUP188-208ENST00000491502 C6orf136Q5SQH8 315 aa12.94□□□□□ -0.34
NUP188-208ENST00000491502 ICE2Q659A1 982 aa12.94□□□□□ -0.34
NUP188-208ENST00000491502 ARMC6Q6NXE6 501 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms