RNA–Protein interactions for RNA: ENST00000491288.5

DNMT3A-214, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-214ENST00000491288 CTSBP07858 339 aa12.89□□□□□ -0.35
DNMT3A-214ENST00000491288 SLC35G6P0C7Q6 338 aa12.89□□□□□ -0.35
DNMT3A-214ENST00000491288 ATXN8OSP0DMR3 200 aa12.89□□□□□ -0.35
DNMT3A-214ENST00000491288 MTHFD2P13995 350 aa12.89□□□□□ -0.35
DNMT3A-214ENST00000491288 AGTR2P50052 363 aa12.89□□□□□ -0.35
DNMT3A-214ENST00000491288 MEF2AQ02078 507 aaPredicted RBP12.89□□□□□ -0.35
DNMT3A-214ENST00000491288 DNASE1L3Q13609 305 aa12.89□□□□□ -0.35
DNMT3A-214ENST00000491288 SETDB1Q15047 1291 aa12.89□□□□□ -0.35
DNMT3A-214ENST00000491288 GARNL3Q5VVW2 1013 aa12.89□□□□□ -0.35
DNMT3A-214ENST00000491288 MLIPQ5VWP3 458 aa12.89□□□□□ -0.35
DNMT3A-214ENST00000491288 ATG9BQ674R7 924 aa12.89□□□□□ -0.35
DNMT3A-214ENST00000491288 METTL2BQ6P1Q9 378 aaKnown RBP12.89□□□□□ -0.35
DNMT3A-214ENST00000491288 ATG14Q6ZNE5 492 aa12.89□□□□□ -0.35
DNMT3A-214ENST00000491288 SLCO4C1Q6ZQN7 724 aa12.89□□□□□ -0.35
DNMT3A-214ENST00000491288 PRICKLE2Q7Z3G6 844 aa12.89□□□□□ -0.35
DNMT3A-214ENST00000491288 ASPGQ86U10 573 aa12.89□□□□□ -0.35
DNMT3A-214ENST00000491288 TEX9Q8N6V9 391 aa12.89□□□□□ -0.35
DNMT3A-214ENST00000491288 PTGR2Q8N8N7 351 aaPredicted RBP12.89□□□□□ -0.35
DNMT3A-214ENST00000491288 TRPV3Q8NET8 790 aa12.89□□□□□ -0.35
DNMT3A-214ENST00000491288 TTLQ8NG68 377 aa12.89□□□□□ -0.35
DNMT3A-214ENST00000491288 PPP4R1Q8TF05 950 aa12.89□□□□□ -0.35
DNMT3A-214ENST00000491288 CT55Q8WUE5 264 aa12.89□□□□□ -0.35
DNMT3A-214ENST00000491288 PHF21BQ96EK2 531 aa12.89□□□□□ -0.35
DNMT3A-214ENST00000491288 PITHD1Q9GZP4 211 aaPredicted RBP12.89□□□□□ -0.35
DNMT3A-214ENST00000491288 CHST8Q9H2A9 424 aa12.89□□□□□ -0.35
DNMT3A-214ENST00000491288 EHD1Q9H4M9 534 aa12.89□□□□□ -0.35
DNMT3A-214ENST00000491288 TMEM216Q9P0N5 145 aa12.89□□□□□ -0.35
DNMT3A-214ENST00000491288 IFT80Q9P2H3 777 aaPredicted RBP12.89□□□□□ -0.35
DNMT3A-214ENST00000491288 XPR1Q9UBH6 696 aa12.89□□□□□ -0.35
DNMT3A-214ENST00000491288 TUBD1Q9UJT1 453 aa12.89□□□□□ -0.35
DNMT3A-214ENST00000491288 CROTQ9UKG9 612 aa12.89□□□□□ -0.35
DNMT3A-214ENST00000491288 SH2B3Q9UQQ2 575 aa12.89□□□□□ -0.35
DNMT3A-214ENST00000491288 HEMK1Q9Y5R4 338 aaPredicted RBP12.89□□□□□ -0.35
DNMT3A-214ENST00000491288 RELNP78509 3460 aa12.89□□□□□ -0.35
DNMT3A-214ENST00000491288 SPTBP11277 2137 aa12.88□□□□□ -0.35
DNMT3A-214ENST00000491288 CCDC151A5D8V7 595 aa12.88□□□□□ -0.35
DNMT3A-214ENST00000491288 URADA6NGE7 173 aa12.88□□□□□ -0.35
DNMT3A-214ENST00000491288 ZNF891A8MT65 544 aaPredicted RBP12.88□□□□□ -0.35
DNMT3A-214ENST00000491288 H3BMH7 237 aa12.88□□□□□ -0.35
DNMT3A-214ENST00000491288 KLK8O60259 260 aa12.88□□□□□ -0.35
DNMT3A-214ENST00000491288 LIFP15018 202 aa12.88□□□□□ -0.35
DNMT3A-214ENST00000491288 KRT4P19013 534 aa12.88□□□□□ -0.35
DNMT3A-214ENST00000491288 RORAP35398 523 aa12.88□□□□□ -0.35
DNMT3A-214ENST00000491288 AHRP35869 848 aa12.88□□□□□ -0.35
DNMT3A-214ENST00000491288 ARL1P40616 181 aaPredicted RBP12.88□□□□□ -0.35
DNMT3A-214ENST00000491288 AVPR1BP47901 424 aa12.88□□□□□ -0.35
DNMT3A-214ENST00000491288 RGS1Q08116 209 aa12.88□□□□□ -0.35
DNMT3A-214ENST00000491288 CHIT1Q13231 466 aa12.88□□□□□ -0.35
DNMT3A-214ENST00000491288 PCBP2Q15366 365 aaKnown RBP eCLIP12.88□□□□□ -0.35
DNMT3A-214ENST00000491288 KRT71Q3SY84 523 aa12.88□□□□□ -0.35
DNMT3A-214ENST00000491288 NKAIN1Q4KMZ8 207 aa12.88□□□□□ -0.35
DNMT3A-214ENST00000491288 PRMT9Q6P2P2 845 aa12.88□□□□□ -0.35
DNMT3A-214ENST00000491288 TMIGD1Q6UXZ0 262 aa12.88□□□□□ -0.35
DNMT3A-214ENST00000491288 CYP4X1Q8N118 509 aa12.88□□□□□ -0.35
DNMT3A-214ENST00000491288 CCDC63Q8NA47 563 aa12.88□□□□□ -0.35
DNMT3A-214ENST00000491288 MZB1Q8WU39 189 aa12.88□□□□□ -0.35
DNMT3A-214ENST00000491288 UBTD2Q8WUN7 234 aa12.88□□□□□ -0.35
DNMT3A-214ENST00000491288 UBE2E3Q969T4 207 aa12.88□□□□□ -0.35
DNMT3A-214ENST00000491288 PTCD3Q96EY7 689 aaKnown RBP12.88□□□□□ -0.35
DNMT3A-214ENST00000491288 SLC45A3Q96JT2 553 aa12.88□□□□□ -0.35
DNMT3A-214ENST00000491288 EFCAB11Q9BUY7 163 aa12.88□□□□□ -0.35
DNMT3A-214ENST00000491288 TMEM109Q9BVC6 243 aa12.88□□□□□ -0.35
DNMT3A-214ENST00000491288 SARGQ9BW04 601 aa12.88□□□□□ -0.35
DNMT3A-214ENST00000491288 YIPF2Q9BWQ6 316 aa12.88□□□□□ -0.35
DNMT3A-214ENST00000491288 NT5DC2Q9H857 520 aa12.88□□□□□ -0.35
DNMT3A-214ENST00000491288 ZNF304Q9HCX3 659 aa12.88□□□□□ -0.35
DNMT3A-214ENST00000491288 ENAMQ9NRM1 1142 aa12.88□□□□□ -0.35
DNMT3A-214ENST00000491288 ZFP69BQ9UJL9 534 aa12.88□□□□□ -0.35
DNMT3A-214ENST00000491288 RUVBL1Q9Y265 456 aaKnown RBP12.88□□□□□ -0.35
DNMT3A-214ENST00000491288 PADI2Q9Y2J8 665 aa12.88□□□□□ -0.35
DNMT3A-214ENST00000491288 NAV2Q8IVL1 2488 aa12.88□□□□□ -0.35
DNMT3A-214ENST00000491288 PTPN13Q12923 2485 aa12.87□□□□□ -0.35
DNMT3A-214ENST00000491288 STX16-NPEPL1H3BU86 382 aa12.87□□□□□ -0.35
DNMT3A-214ENST00000491288 STX16O14662 325 aa12.87□□□□□ -0.35
DNMT3A-214ENST00000491288 RGS16O15492 202 aaPredicted RBP12.87□□□□□ -0.35
DNMT3A-214ENST00000491288 RAB40ALP0C0E4 278 aa12.87□□□□□ -0.35
DNMT3A-214ENST00000491288 VARSP26640 1264 aaKnown RBP12.87□□□□□ -0.35
DNMT3A-214ENST00000491288 PTPN4P29074 926 aa12.87□□□□□ -0.35
DNMT3A-214ENST00000491288 EEF1DP29692 281 aaKnown RBP12.87□□□□□ -0.35
DNMT3A-214ENST00000491288 HPDP32754 393 aaPredicted RBP12.87□□□□□ -0.35
DNMT3A-214ENST00000491288 CRHR1P34998 444 aa12.87□□□□□ -0.35
DNMT3A-214ENST00000491288 BCL6P41182 706 aa12.87□□□□□ -0.35
DNMT3A-214ENST00000491288 SKP1P63208 163 aa12.87□□□□□ -0.35
DNMT3A-214ENST00000491288 NFKB2Q00653 900 aa12.87□□□□□ -0.35
DNMT3A-214ENST00000491288 REEP5Q00765 189 aa12.87□□□□□ -0.35
DNMT3A-214ENST00000491288 PWP1Q13610 501 aa12.87□□□□□ -0.35
DNMT3A-214ENST00000491288 GTF2H2Q13888 395 aa12.87□□□□□ -0.35
DNMT3A-214ENST00000491288 FAM53BQ14153 422 aa12.87□□□□□ -0.35
DNMT3A-214ENST00000491288 DOC2AQ14183 400 aa12.87□□□□□ -0.35
DNMT3A-214ENST00000491288 SLBPQ14493 270 aaKnown RBP eCLIP12.87□□□□□ -0.35
DNMT3A-214ENST00000491288 HKDC1Q2TB90 917 aa12.87□□□□□ -0.35
DNMT3A-214ENST00000491288 PRTGQ2VWP7 1150 aa12.87□□□□□ -0.35
DNMT3A-214ENST00000491288 CCDC153Q494R4 210 aa12.87□□□□□ -0.35
DNMT3A-214ENST00000491288 GTF2H2CQ6P1K8 395 aa12.87□□□□□ -0.35
DNMT3A-214ENST00000491288 C16orf46Q6P387 395 aa12.87□□□□□ -0.35
DNMT3A-214ENST00000491288 BORAQ6PGQ7 559 aa12.87□□□□□ -0.35
DNMT3A-214ENST00000491288 MYLK4Q86YV6 388 aaPredicted RBP12.87□□□□□ -0.35
DNMT3A-214ENST00000491288 SLC22A9Q8IVM8 553 aa12.87□□□□□ -0.35
DNMT3A-214ENST00000491288 CCT6BQ92526 530 aa12.87□□□□□ -0.35
DNMT3A-214ENST00000491288 TM4SF19Q96DZ7 209 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms