RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 MNX1P50219 401 aaPredicted RBP15.14■□□□□ 0.01
BRD9-208ENST00000489816 AP1S2P56377 157 aa15.14■□□□□ 0.01
BRD9-208ENST00000489816 GANABQ14697 944 aaKnown RBP15.14■□□□□ 0.01
BRD9-208ENST00000489816 SHQ1Q6PI26 577 aaKnown RBP15.14■□□□□ 0.01
BRD9-208ENST00000489816 LILRA6Q6PI73 481 aa15.14■□□□□ 0.01
BRD9-208ENST00000489816 RAB2BQ8WUD1 216 aa15.14■□□□□ 0.01
BRD9-208ENST00000489816 FAR1Q8WVX9 515 aa15.14■□□□□ 0.01
BRD9-208ENST00000489816 FKBP10Q96AY3 582 aa15.14■□□□□ 0.01
BRD9-208ENST00000489816 TRIM43Q96BQ3 446 aaPredicted RBP15.14■□□□□ 0.01
BRD9-208ENST00000489816 ASIC5Q9NY37 505 aa15.14■□□□□ 0.01
BRD9-208ENST00000489816 ZNF510Q9Y2H8 683 aa15.14■□□□□ 0.01
BRD9-208ENST00000489816 A0A0G2JN53 185 aa15.13■□□□□ 0.01
BRD9-208ENST00000489816 CD6P30203 668 aa15.13■□□□□ 0.01
BRD9-208ENST00000489816 IRS1P35568 1242 aa15.13■□□□□ 0.01
BRD9-208ENST00000489816 MASP1P48740 699 aa15.13■□□□□ 0.01
BRD9-208ENST00000489816 TBPL1P62380 186 aa15.13■□□□□ 0.01
BRD9-208ENST00000489816 RPP38P78345 283 aaKnown RBP15.13■□□□□ 0.01
BRD9-208ENST00000489816 SLBPQ14493 270 aaKnown RBP eCLIP15.13■□□□□ 0.01
BRD9-208ENST00000489816 ZNF829Q3KNS6 432 aaPredicted RBP15.13■□□□□ 0.01
BRD9-208ENST00000489816 HMGN2P46Q86SG4 172 aa15.13■□□□□ 0.01
BRD9-208ENST00000489816 TCAIMQ8N3R3 496 aa15.13■□□□□ 0.01
BRD9-208ENST00000489816 C12orf76Q8N812 135 aaPredicted RBP15.13■□□□□ 0.01
BRD9-208ENST00000489816 PCYT1BQ9Y5K3 369 aaPredicted RBP15.13■□□□□ 0.01
BRD9-208ENST00000489816 MMP20O60882 483 aa15.13■□□□□ 0.01
BRD9-208ENST00000489816 ATG13O75143 517 aa15.13■□□□□ 0.01
BRD9-208ENST00000489816 MOSPD3O75425 235 aa15.13■□□□□ 0.01
BRD9-208ENST00000489816 SLCO2B1O94956 709 aa15.13■□□□□ 0.01
BRD9-208ENST00000489816 KLK1P06870 262 aa15.13■□□□□ 0.01
BRD9-208ENST00000489816 IDUAP35475 653 aa15.13■□□□□ 0.01
BRD9-208ENST00000489816 SLC19A1P41440 591 aa15.13■□□□□ 0.01
BRD9-208ENST00000489816 TMBIM6P55061 237 aa15.13■□□□□ 0.01
BRD9-208ENST00000489816 SRSF11Q05519 484 aaKnown RBP15.13■□□□□ 0.01
BRD9-208ENST00000489816 HENMT1Q5T8I9 393 aaKnown RBP15.13■□□□□ 0.01
BRD9-208ENST00000489816 LIPIQ6XZB0 460 aa15.13■□□□□ 0.01
BRD9-208ENST00000489816 PARS2Q7L3T8 475 aaKnown RBP15.13■□□□□ 0.01
BRD9-208ENST00000489816 ARMCX6Q7L4S7 300 aa15.13■□□□□ 0.01
BRD9-208ENST00000489816 SLCO6A1Q86UG4 719 aa15.13■□□□□ 0.01
BRD9-208ENST00000489816 VN1R2Q8NFZ6 395 aa15.13■□□□□ 0.01
BRD9-208ENST00000489816 UTP15Q8TED0 518 aaKnown RBP15.13■□□□□ 0.01
BRD9-208ENST00000489816 PROX1Q92786 737 aa15.13■□□□□ 0.01
BRD9-208ENST00000489816 RC3H2Q9HBD1 1191 aaKnown RBP15.13■□□□□ 0.01
BRD9-208ENST00000489816 USE1Q9NZ43 259 aa15.13■□□□□ 0.01
BRD9-208ENST00000489816 OGDHLQ9ULD0 1010 aa15.13■□□□□ 0.01
BRD9-208ENST00000489816 SLC6A14Q9UN76 642 aa15.13■□□□□ 0.01
BRD9-208ENST00000489816 RUVBL1Q9Y265 456 aaKnown RBP15.13■□□□□ 0.01
BRD9-208ENST00000489816 ZNF99A8MXY4 864 aaPredicted RBP15.12■□□□□ 0.01
BRD9-208ENST00000489816 PCDHGA12O60330 932 aa15.12■□□□□ 0.01
BRD9-208ENST00000489816 GPX2P18283 190 aa15.12■□□□□ 0.01
BRD9-208ENST00000489816 NFE2L1Q14494 772 aa15.12■□□□□ 0.01
BRD9-208ENST00000489816 MAPK11Q15759 364 aa15.12■□□□□ 0.01
BRD9-208ENST00000489816 LRRC26Q2I0M4 334 aa15.12■□□□□ 0.01
BRD9-208ENST00000489816 ADPRMQ3LIE5 342 aa15.12■□□□□ 0.01
BRD9-208ENST00000489816 PAGE2BQ5JRK9 111 aa15.12■□□□□ 0.01
BRD9-208ENST00000489816 RAET1GQ6H3X3 334 aa15.12■□□□□ 0.01
BRD9-208ENST00000489816 BRAT1Q6PJG6 821 aa15.12■□□□□ 0.01
BRD9-208ENST00000489816 DHRS4L2Q6PKH6 230 aa15.12■□□□□ 0.01
BRD9-208ENST00000489816 IL36AQ9UHA7 158 aa15.12■□□□□ 0.01
BRD9-208ENST00000489816 EXO1Q9UQ84 846 aaKnown RBP15.12■□□□□ 0.01
BRD9-208ENST00000489816 PPIL1Q9Y3C6 166 aa15.12■□□□□ 0.01
BRD9-208ENST00000489816 PCDHGA10Q9Y5H3 936 aa15.12■□□□□ 0.01
BRD9-208ENST00000489816 KCNE2Q9Y6J6 123 aa15.12■□□□□ 0.01
BRD9-208ENST00000489816 ABHD14A-ACY1A0A1B0GW23 586 aa15.12■□□□□ 0.01
BRD9-208ENST00000489816 ZNF701M0R085 212 aaPredicted RBP15.12■□□□□ 0.01
BRD9-208ENST00000489816 SCAMP2O15127 329 aaKnown RBP15.12■□□□□ 0.01
BRD9-208ENST00000489816 CLPXO76031 633 aa15.12■□□□□ 0.01
BRD9-208ENST00000489816 GSTM1P09488 218 aa15.12■□□□□ 0.01
BRD9-208ENST00000489816 CLTBP09497 229 aa15.12■□□□□ 0.01
BRD9-208ENST00000489816 CYP2A6P11509 494 aaPredicted RBP15.12■□□□□ 0.01
BRD9-208ENST00000489816 PCMT1P22061 227 aa15.12■□□□□ 0.01
BRD9-208ENST00000489816 GSTM4Q03013 218 aa15.12■□□□□ 0.01
BRD9-208ENST00000489816 RGNQ15493 299 aa15.12■□□□□ 0.01
BRD9-208ENST00000489816 CYP2A13Q16696 494 aa15.12■□□□□ 0.01
BRD9-208ENST00000489816 GGTA1PQ4G0N0 100 aa15.12■□□□□ 0.01
BRD9-208ENST00000489816 CCDC149Q6ZUS6 474 aa15.12■□□□□ 0.01
BRD9-208ENST00000489816 SERPINA11Q86U17 422 aa15.12■□□□□ 0.01
BRD9-208ENST00000489816 FEVQ99581 238 aa15.12■□□□□ 0.01
BRD9-208ENST00000489816 ROGDIQ9GZN7 287 aa15.12■□□□□ 0.01
BRD9-208ENST00000489816 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.12■□□□□ 0.01
BRD9-208ENST00000489816 GPATCH2Q9NW75 528 aa15.12■□□□□ 0.01
BRD9-208ENST00000489816 PCDHB11Q9Y5F2 797 aa15.12■□□□□ 0.01
BRD9-208ENST00000489816 SPTBN5Q9NRC6 3674 aaKnown RBP15.12■□□□□ 0.01
BRD9-208ENST00000489816 FAM227AF5H4B4 570 aa15.12■□□□□ 0.01
BRD9-208ENST00000489816 M0QX08 132 aa15.12■□□□□ 0.01
BRD9-208ENST00000489816 SUV39H1O43463 412 aa15.12■□□□□ 0.01
BRD9-208ENST00000489816 MPC1LP0DKB6 136 aa15.12■□□□□ 0.01
BRD9-208ENST00000489816 IDSP22304 550 aa15.12■□□□□ 0.01
BRD9-208ENST00000489816 DNAJA1P31689 397 aaKnown RBP15.12■□□□□ 0.01
BRD9-208ENST00000489816 CDH12P55289 794 aa15.12■□□□□ 0.01
BRD9-208ENST00000489816 C2orf80Q0P641 193 aa15.12■□□□□ 0.01
BRD9-208ENST00000489816 GRSF1Q12849 480 aaKnown RBP eCLIP15.12■□□□□ 0.011e-8■■■■□ 23.1
BRD9-208ENST00000489816 CTF1Q16619 201 aa15.12■□□□□ 0.01
BRD9-208ENST00000489816 SMU1Q2TAY7 513 aa15.12■□□□□ 0.01
BRD9-208ENST00000489816 SOWAHCQ53LP3 525 aaPredicted RBP15.12■□□□□ 0.01
BRD9-208ENST00000489816 LIPJQ5W064 366 aa15.12■□□□□ 0.01
BRD9-208ENST00000489816 METTL3Q86U44 580 aaKnown RBP15.12■□□□□ 0.01
BRD9-208ENST00000489816 BORCS5Q969J3 196 aa15.12■□□□□ 0.01
BRD9-208ENST00000489816 TMED5Q9Y3A6 229 aa15.12■□□□□ 0.01
BRD9-208ENST00000489816 M0R3G1 203 aa15.11■□□□□ 0.01
BRD9-208ENST00000489816 OCM2P0CE71 109 aa15.11■□□□□ 0.01
BRD9-208ENST00000489816 OCMP0CE72 109 aaPredicted RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms