RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 SLC13A3Q8WWT9 602 aa10.55□□□□□ -0.72
CPSF7-212ENST00000489728 MAGEB10Q96LZ2 347 aaPredicted RBP10.55□□□□□ -0.72
CPSF7-212ENST00000489728 IP6K3Q96PC2 410 aa10.55□□□□□ -0.72
CPSF7-212ENST00000489728 ACTL8Q9H568 366 aa10.55□□□□□ -0.72
CPSF7-212ENST00000489728 CLK4Q9HAZ1 481 aaKnown RBP10.55□□□□□ -0.72
CPSF7-212ENST00000489728 CPNE5Q9HCH3 593 aa10.55□□□□□ -0.72
CPSF7-212ENST00000489728 ZNF304Q9HCX3 659 aa10.55□□□□□ -0.72
CPSF7-212ENST00000489728 STARD5Q9NSY2 213 aa10.55□□□□□ -0.72
CPSF7-212ENST00000489728 ZNF358Q9NW07 568 aa10.55□□□□□ -0.72
CPSF7-212ENST00000489728 GEMIN8Q9NWZ8 242 aaKnown RBP10.55□□□□□ -0.72
CPSF7-212ENST00000489728 SENP1Q9P0U3 644 aa10.55□□□□□ -0.72
CPSF7-212ENST00000489728 CPSF2Q9P2I0 782 aaKnown RBP10.55□□□□□ -0.72
CPSF7-212ENST00000489728 NDOR1Q9UHB4 597 aa10.55□□□□□ -0.72
CPSF7-212ENST00000489728 ADGRE2Q9UHX3 823 aa10.55□□□□□ -0.72
CPSF7-212ENST00000489728 GRID1Q9ULK0 1009 aa10.55□□□□□ -0.72
CPSF7-212ENST00000489728 TSC22D4Q9Y3Q8 395 aa10.55□□□□□ -0.72
CPSF7-212ENST00000489728 ANGPTL3Q9Y5C1 460 aa10.55□□□□□ -0.72
CPSF7-212ENST00000489728 SPTBP11277 2137 aa10.55□□□□□ -0.72
CPSF7-212ENST00000489728 ITPR1Q14643 2758 aa10.54□□□□□ -0.72
CPSF7-212ENST00000489728 FER1L5A0AVI2 2057 aa10.54□□□□□ -0.72
CPSF7-212ENST00000489728 IGLV3-12A0A075B6K2 115 aa10.54□□□□□ -0.72
CPSF7-212ENST00000489728 FEZF1A0PJY2 475 aa10.54□□□□□ -0.72
CPSF7-212ENST00000489728 E2F3O00716 465 aa10.54□□□□□ -0.72
CPSF7-212ENST00000489728 PCDH17O14917 1159 aa10.54□□□□□ -0.72
CPSF7-212ENST00000489728 NDUFS4O43181 175 aa10.54□□□□□ -0.72
CPSF7-212ENST00000489728 LCMT2O60294 686 aaKnown RBP10.54□□□□□ -0.72
CPSF7-212ENST00000489728 CLEC3AO75596 197 aa10.54□□□□□ -0.72
CPSF7-212ENST00000489728 WFS1O76024 890 aa10.54□□□□□ -0.72
CPSF7-212ENST00000489728 NSA2O95478 260 aaKnown RBP10.54□□□□□ -0.72
CPSF7-212ENST00000489728 SERPINA6P08185 405 aa10.54□□□□□ -0.72
CPSF7-212ENST00000489728 EPORP19235 508 aa10.54□□□□□ -0.72
CPSF7-212ENST00000489728 WT1P19544 449 aaPredicted RBP10.54□□□□□ -0.72
CPSF7-212ENST00000489728 ITGAXP20702 1163 aa10.54□□□□□ -0.72
CPSF7-212ENST00000489728 ALAS2P22557 587 aa10.54□□□□□ -0.72
CPSF7-212ENST00000489728 F8A1P23610 371 aa10.54□□□□□ -0.72
CPSF7-212ENST00000489728 AVPR1BP47901 424 aa10.54□□□□□ -0.72
CPSF7-212ENST00000489728 AGTR2P50052 363 aa10.54□□□□□ -0.72
CPSF7-212ENST00000489728 STXBP1P61764 594 aaKnown RBP10.54□□□□□ -0.72
CPSF7-212ENST00000489728 SLC18A2Q05940 514 aa10.54□□□□□ -0.72
CPSF7-212ENST00000489728 CDC20Q12834 499 aa10.54□□□□□ -0.72
CPSF7-212ENST00000489728 DOC2AQ14183 400 aa10.54□□□□□ -0.72
CPSF7-212ENST00000489728 SLBPQ14493 270 aaKnown RBP eCLIP10.54□□□□□ -0.72
CPSF7-212ENST00000489728 HIST2H2ACQ16777 129 aaPredicted RBP10.54□□□□□ -0.72
CPSF7-212ENST00000489728 UGT8Q16880 541 aa10.54□□□□□ -0.72
CPSF7-212ENST00000489728 CCDC153Q494R4 210 aa10.54□□□□□ -0.72
CPSF7-212ENST00000489728 XKR6Q5GH73 641 aa10.54□□□□□ -0.72
CPSF7-212ENST00000489728 C1orf189Q5VU69 101 aa10.54□□□□□ -0.72
CPSF7-212ENST00000489728 LIPJQ5W064 366 aa10.54□□□□□ -0.72
CPSF7-212ENST00000489728 HIST2H2AA3Q6FI13 130 aa10.54□□□□□ -0.72
CPSF7-212ENST00000489728 GRHL2Q6ISB3 625 aa10.54□□□□□ -0.72
CPSF7-212ENST00000489728 FAM199XQ6PEV8 388 aaPredicted RBP10.54□□□□□ -0.72
CPSF7-212ENST00000489728 ABHD13Q7L211 337 aa10.54□□□□□ -0.72
CPSF7-212ENST00000489728 SLC22A9Q8IVM8 553 aa10.54□□□□□ -0.72
CPSF7-212ENST00000489728 PTGR2Q8N8N7 351 aaPredicted RBP10.54□□□□□ -0.72
CPSF7-212ENST00000489728 ENDOVQ8N8Q3 282 aaKnown RBP10.54□□□□□ -0.72
CPSF7-212ENST00000489728 ANKRD53Q8N9V6 530 aa10.54□□□□□ -0.72
CPSF7-212ENST00000489728 ZNF740Q8NDX6 193 aa10.54□□□□□ -0.72
CPSF7-212ENST00000489728 THAP4Q8WY91 577 aa10.54□□□□□ -0.72
CPSF7-212ENST00000489728 SLC6A16Q9GZN6 736 aa10.54□□□□□ -0.72
CPSF7-212ENST00000489728 SPNS1Q9H2V7 528 aa10.54□□□□□ -0.72
CPSF7-212ENST00000489728 RHBGQ9H310 441 aa10.54□□□□□ -0.72
CPSF7-212ENST00000489728 SYNPO2LQ9H987 977 aa10.54□□□□□ -0.72
CPSF7-212ENST00000489728 AKIRIN1Q9H9L7 192 aaPredicted RBP10.54□□□□□ -0.72
CPSF7-212ENST00000489728 C14orf105Q9NVL8 296 aa10.54□□□□□ -0.72
CPSF7-212ENST00000489728 TMEM216Q9P0N5 145 aa10.54□□□□□ -0.72
CPSF7-212ENST00000489728 IL17BQ9UHF5 180 aa10.54□□□□□ -0.72
CPSF7-212ENST00000489728 MID2Q9UJV3 735 aa10.54□□□□□ -0.72
CPSF7-212ENST00000489728 PCTPQ9UKL6 214 aa10.54□□□□□ -0.72
CPSF7-212ENST00000489728 TCFL5Q9UL49 500 aa10.54□□□□□ -0.72
CPSF7-212ENST00000489728 PLAAQ9Y263 795 aa10.54□□□□□ -0.72
CPSF7-212ENST00000489728 STK38LQ9Y2H1 464 aa10.54□□□□□ -0.72
CPSF7-212ENST00000489728 ASB1Q9Y576 335 aa10.54□□□□□ -0.72
CPSF7-212ENST00000489728 ZFHX4Q86UP3 3567 aa10.54□□□□□ -0.72
CPSF7-212ENST00000489728 A0A1W2PPM1 405 aa10.53□□□□□ -0.72
CPSF7-212ENST00000489728 ANKDD1BA6NHY2 528 aa10.53□□□□□ -0.72
CPSF7-212ENST00000489728 SMIM23A6NLE4 172 aa10.53□□□□□ -0.72
CPSF7-212ENST00000489728 A8MT66 165 aa10.53□□□□□ -0.72
CPSF7-212ENST00000489728 COPEO14579 308 aa10.53□□□□□ -0.72
CPSF7-212ENST00000489728 KLF7O75840 302 aaPredicted RBP10.53□□□□□ -0.72
CPSF7-212ENST00000489728 IGHEP01854 428 aa10.53□□□□□ -0.72
CPSF7-212ENST00000489728 RPS17P08708 135 aaKnown RBP10.53□□□□□ -0.72
CPSF7-212ENST00000489728 SBK3P0C264 359 aa10.53□□□□□ -0.72
CPSF7-212ENST00000489728 KRT4P19013 534 aa10.53□□□□□ -0.72
CPSF7-212ENST00000489728 FBLP22087 321 aaKnown RBP10.53□□□□□ -0.72
CPSF7-212ENST00000489728 IL10P22301 178 aa10.53□□□□□ -0.72
CPSF7-212ENST00000489728 ATP5F1P24539 256 aaPredicted RBP10.53□□□□□ -0.72
CPSF7-212ENST00000489728 VARSP26640 1264 aaKnown RBP10.53□□□□□ -0.72
CPSF7-212ENST00000489728 EEF1DP29692 281 aaKnown RBP10.53□□□□□ -0.72
CPSF7-212ENST00000489728 FOLR3P41439 243 aa10.53□□□□□ -0.72
CPSF7-212ENST00000489728 HERVK_113P63132 956 aa10.53□□□□□ -0.72
CPSF7-212ENST00000489728 MEF2AQ02078 507 aaPredicted RBP10.53□□□□□ -0.72
CPSF7-212ENST00000489728 CHIT1Q13231 466 aa10.53□□□□□ -0.72
CPSF7-212ENST00000489728 SRSF6Q13247 344 aaKnown RBP10.53□□□□□ -0.72
CPSF7-212ENST00000489728 GTF2H2Q13888 395 aa10.53□□□□□ -0.72
CPSF7-212ENST00000489728 RBBP5Q15291 538 aaKnown RBP10.53□□□□□ -0.72
CPSF7-212ENST00000489728 ARHGAP40Q5TG30 622 aa10.53□□□□□ -0.72
CPSF7-212ENST00000489728 LCN10Q6JVE6 187 aa10.53□□□□□ -0.72
CPSF7-212ENST00000489728 GTF2H2CQ6P1K8 395 aa10.53□□□□□ -0.72
CPSF7-212ENST00000489728 MED27Q6P2C8 311 aa10.53□□□□□ -0.72
CPSF7-212ENST00000489728 LRIG3Q6UXM1 1119 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms