RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 XKR6Q5GH73 641 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 SPANXN4Q5MJ08 99 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 LCE2AQ5TA79 106 aaPredicted RBP8.16□□□□□ -1.1
VTI1A-207ENST00000489357 ANXA8L1Q5VT79 327 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 ACSM2BQ68CK6 577 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 NOXRED1Q6NXP6 359 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 MED27Q6P2C8 311 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 SUSD1Q6UWL2 747 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 SERPINA13PQ6UXR4 307 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 RFLNAQ6ZTI6 216 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 DET1Q7L5Y6 550 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 IFNEQ86WN2 208 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 LAS2Q8IYD9 372 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 MICU2Q8IYU8 434 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 GALNT4Q8N4A0 578 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 DTWD1Q8N5C7 304 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 NATD1Q8N6N6 113 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 DTWD2Q8NBA8 298 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 OR2L2Q8NH16 312 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 PNPT1Q8TCS8 783 aaKnown RBP8.16□□□□□ -1.1
VTI1A-207ENST00000489357 NCSTNQ92542 709 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 SDCCAG3Q96C92 435 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 BIRC7Q96CA5 298 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 DGCR14Q96DF8 476 aaKnown RBP8.16□□□□□ -1.1
VTI1A-207ENST00000489357 MTERF3Q96E29 417 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 PPM1MQ96MI6 270 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 TMEM74Q96NL1 305 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 CPPED1Q9BRF8 314 aaPredicted RBP8.16□□□□□ -1.1
VTI1A-207ENST00000489357 THUMPD3Q9BV44 507 aaKnown RBP8.16□□□□□ -1.1
VTI1A-207ENST00000489357 CHID1Q9BWS9 393 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 SGPP1Q9BX95 441 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 PAIP1Q9H074 479 aaKnown RBP8.16□□□□□ -1.1
VTI1A-207ENST00000489357 FBRSQ9HAH7 460 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 LMAN1LQ9HAT1 526 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 CLK4Q9HAZ1 481 aaKnown RBP8.16□□□□□ -1.1
VTI1A-207ENST00000489357 BRD7Q9NPI1 651 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 SERHLQ9NQF3 203 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 FARSBQ9NSD9 589 aaKnown RBP8.16□□□□□ -1.1
VTI1A-207ENST00000489357 SMPD3Q9NY59 655 aaPredicted RBP8.16□□□□□ -1.1
VTI1A-207ENST00000489357 VAPAQ9P0L0 249 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 DNAJB9Q9UBS3 223 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.16□□□□□ -1.1
VTI1A-207ENST00000489357 CD84Q9UIB8 345 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 BTNL2Q9UIR0 455 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 SAMD4AQ9UPU9 718 aaKnown RBP8.16□□□□□ -1.1
VTI1A-207ENST00000489357 INVSQ9Y283 1065 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 MYRFQ9Y2G1 1151 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 PLXND1Q9Y4D7 1925 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 NEUROG3Q9Y4Z2 214 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 COMMD3-BMI1R4GMX3 469 aa8.16□□□□□ -1.1
VTI1A-207ENST00000489357 FAM186AA6NE01 2351 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 GON4LQ3T8J9 2241 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 ABCA7Q8IZY2 2146 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 WDFY4Q6ZS81 3184 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 C7orf72A4D263 438 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 ANTXRLA6NF34 631 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 MGAT4DA6NG13 374 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 TRIM64CA6NLI5 447 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 C9JVG2 144 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 H3BNH8 94 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 RFXANKO14593 260 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 DPM1O60762 260 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 LILRB5O75023 590 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 KAT7O95251 611 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 CCNDBP1O95273 360 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 SLC16A8O95907 504 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 SOD1P00441 154 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 EGFP01133 1207 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 DCNP07585 359 aaKnown RBP8.15□□□□□ -1.1
VTI1A-207ENST00000489357 SMIM18P0DKX4 95 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 C6P13671 934 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 GPX2P18283 190 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 IMPA1P29218 277 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 OXTRP30559 389 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 HPCAL1P37235 193 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 GRIA2P42262 883 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 GPR1P46091 355 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 DGKQP52824 942 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 OR4D2P58180 307 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 MYBPC1Q00872 1141 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 CTBSQ01459 385 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 GRSF1Q12849 480 aaKnown RBP eCLIP8.15□□□□□ -1.1
VTI1A-207ENST00000489357 MERTKQ12866 999 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 VEZF1Q14119 521 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 DOC2AQ14183 400 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 ZNF234Q14588 700 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 UBXN2BQ14CS0 331 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 HIST2H2ACQ16777 129 aaPredicted RBP8.15□□□□□ -1.1
VTI1A-207ENST00000489357 DUOXA1Q1HG43 343 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 RFX4Q33E94 735 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 SLC36A3Q495N2 470 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.15□□□□□ -1.1
VTI1A-207ENST00000489357 RNFT1Q5M7Z0 435 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 C6orf52Q5T4I8 152 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 HIST2H2AA3Q6FI13 130 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 TMEM220Q6QAJ8 160 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 MBOAT1Q6ZNC8 495 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 SLCO4C1Q6ZQN7 724 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 IKBIPQ70UQ0 350 aa8.15□□□□□ -1.1
VTI1A-207ENST00000489357 R3HCC1LQ7Z5L2 792 aaKnown RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms