RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 ACOD1A6NK06 481 aa2.93□□□□□ -1.94
RFC4-213ENST00000489028 TBX10O75333 385 aa2.93□□□□□ -1.94
RFC4-213ENST00000489028 GGPS1O95749 300 aa2.93□□□□□ -1.94
RFC4-213ENST00000489028 HPRP00739 348 aa2.93□□□□□ -1.94
RFC4-213ENST00000489028 APOA4P06727 396 aa2.93□□□□□ -1.94
RFC4-213ENST00000489028 HOXD4P09016 255 aaPredicted RBP2.93□□□□□ -1.94
RFC4-213ENST00000489028 FOLR2P14207 255 aa2.93□□□□□ -1.94
RFC4-213ENST00000489028 AADACP22760 399 aa2.93□□□□□ -1.94
RFC4-213ENST00000489028 IL4RP24394 825 aa2.93□□□□□ -1.94
RFC4-213ENST00000489028 EDNRAP25101 427 aa2.93□□□□□ -1.94
RFC4-213ENST00000489028 CACNG1Q06432 222 aa2.93□□□□□ -1.94
RFC4-213ENST00000489028 ZFP36L1Q07352 338 aaKnown RBP2.93□□□□□ -1.94
RFC4-213ENST00000489028 ZNF177Q13360 481 aaPredicted RBP2.93□□□□□ -1.94
RFC4-213ENST00000489028 PRPF4BQ13523 1007 aaKnown RBP2.93□□□□□ -1.94
RFC4-213ENST00000489028 RASA2Q15283 850 aa2.93□□□□□ -1.94
RFC4-213ENST00000489028 DUSP5Q16690 384 aa2.93□□□□□ -1.94
RFC4-213ENST00000489028 KRBOX4Q5JUW0 171 aa2.93□□□□□ -1.94
RFC4-213ENST00000489028 SPECC1Q5M775 1068 aa2.93□□□□□ -1.94
RFC4-213ENST00000489028 C5orf24Q7Z6I8 188 aa2.93□□□□□ -1.94
RFC4-213ENST00000489028 ANKRD23Q86SG2 305 aa2.93□□□□□ -1.94
RFC4-213ENST00000489028 MFN1Q8IWA4 741 aa2.93□□□□□ -1.94
RFC4-213ENST00000489028 APCDD1Q8J025 514 aa2.93□□□□□ -1.94
RFC4-213ENST00000489028 FBXL16Q8N461 479 aa2.93□□□□□ -1.94
RFC4-213ENST00000489028 GBP7Q8N8V2 638 aaPredicted RBP2.93□□□□□ -1.94
RFC4-213ENST00000489028 CAMKVQ8NCB2 501 aa2.93□□□□□ -1.94
RFC4-213ENST00000489028 CCDC191Q8NCU4 936 aa2.93□□□□□ -1.94
RFC4-213ENST00000489028 UBE2Q2Q8WVN8 375 aa2.93□□□□□ -1.94
RFC4-213ENST00000489028 MRPS27Q92552 414 aaKnown RBP2.93□□□□□ -1.94
RFC4-213ENST00000489028 RBM41Q96IZ5 413 aaKnown RBP2.93□□□□□ -1.94
RFC4-213ENST00000489028 KATNB1Q9BVA0 655 aa2.93□□□□□ -1.94
RFC4-213ENST00000489028 RIMS4Q9H426 269 aaPredicted RBP2.93□□□□□ -1.94
RFC4-213ENST00000489028 PRR34Q9NV39 138 aa2.93□□□□□ -1.94
RFC4-213ENST00000489028 BAIAP2L1Q9UHR4 511 aa2.93□□□□□ -1.94
RFC4-213ENST00000489028 PILRBQ9UKJ0 227 aa2.93□□□□□ -1.94
RFC4-213ENST00000489028 NOL7Q9UMY1 257 aaKnown RBP2.93□□□□□ -1.94
RFC4-213ENST00000489028 PA2G4Q9UQ80 394 aaKnown RBP2.93□□□□□ -1.94
RFC4-213ENST00000489028 LIPGQ9Y5X9 500 aa2.93□□□□□ -1.94
RFC4-213ENST00000489028 A0A087WZ39 114 aa2.92□□□□□ -1.94
RFC4-213ENST00000489028 IGHV3-38A0A0C4DH36 116 aa2.92□□□□□ -1.94
RFC4-213ENST00000489028 A8MXE2 369 aa2.92□□□□□ -1.94
RFC4-213ENST00000489028 SHISA9B4DS77 424 aa2.92□□□□□ -1.94
RFC4-213ENST00000489028 SLC1A7O00341 560 aa2.92□□□□□ -1.94
RFC4-213ENST00000489028 BCL2L11O43521 198 aa2.92□□□□□ -1.94
RFC4-213ENST00000489028 CYTIPO60759 359 aa2.92□□□□□ -1.94
RFC4-213ENST00000489028 PRAF2O60831 178 aa2.92□□□□□ -1.94
RFC4-213ENST00000489028 LRCH4O75427 683 aa2.92□□□□□ -1.94
RFC4-213ENST00000489028 SAP30O75446 220 aa2.92□□□□□ -1.94
RFC4-213ENST00000489028 STAG3L1P0CL83 205 aa2.92□□□□□ -1.94
RFC4-213ENST00000489028 BCL3P20749 454 aa2.92□□□□□ -1.94
RFC4-213ENST00000489028 HSPA4P34932 840 aa2.92□□□□□ -1.94
RFC4-213ENST00000489028 COPB2P35606 906 aa2.92□□□□□ -1.94
RFC4-213ENST00000489028 HSD17B3P37058 310 aa2.92□□□□□ -1.94
RFC4-213ENST00000489028 CETN2P41208 172 aa2.92□□□□□ -1.94
RFC4-213ENST00000489028 CAMK2DQ13557 499 aa2.92□□□□□ -1.94
RFC4-213ENST00000489028 TAZQ16635 292 aa2.92□□□□□ -1.94
RFC4-213ENST00000489028 ALDH1L2Q3SY69 923 aa2.92□□□□□ -1.94
RFC4-213ENST00000489028 KRT80Q6KB66 452 aa2.92□□□□□ -1.94
RFC4-213ENST00000489028 PPP1R21Q6ZMI0 780 aa2.92□□□□□ -1.94
RFC4-213ENST00000489028 C3P1Q6ZMU1 363 aa2.92□□□□□ -1.94
RFC4-213ENST00000489028 PIGWQ7Z7B1 504 aa2.92□□□□□ -1.94
RFC4-213ENST00000489028 HPS6Q86YV9 775 aa2.92□□□□□ -1.94
RFC4-213ENST00000489028 CCDC60Q8IWA6 550 aaPredicted RBP2.92□□□□□ -1.94
RFC4-213ENST00000489028 FAM9BQ8IZU0 186 aa2.92□□□□□ -1.94
RFC4-213ENST00000489028 OR4C15Q8NGM1 316 aa2.92□□□□□ -1.94
RFC4-213ENST00000489028 OR10G7Q8NGN6 311 aa2.92□□□□□ -1.94
RFC4-213ENST00000489028 SEPT1Q8WYJ6 367 aa2.92□□□□□ -1.94
RFC4-213ENST00000489028 CNDP2Q96KP4 475 aaKnown RBP2.92□□□□□ -1.94
RFC4-213ENST00000489028 NAA11Q9BSU3 229 aaPredicted RBP2.92□□□□□ -1.94
RFC4-213ENST00000489028 PUS3Q9BZE2 481 aaKnown RBP2.92□□□□□ -1.94
RFC4-213ENST00000489028 FN3KQ9H479 309 aa2.92□□□□□ -1.94
RFC4-213ENST00000489028 HCFC1P51610 2035 aa2.92□□□□□ -1.94
RFC4-213ENST00000489028 ADAMTS9Q9P2N4 1935 aa2.91□□□□□ -1.94
RFC4-213ENST00000489028 FAM170AA1A519 330 aa2.91□□□□□ -1.94
RFC4-213ENST00000489028 F8VVB4 439 aa2.91□□□□□ -1.94
RFC4-213ENST00000489028 F8VWA3 439 aa2.91□□□□□ -1.94
RFC4-213ENST00000489028 H3BMM5 538 aa2.91□□□□□ -1.94
RFC4-213ENST00000489028 MAGEB2O15479 319 aa2.91□□□□□ -1.94
RFC4-213ENST00000489028 POP4O95707 220 aaKnown RBP2.91□□□□□ -1.94
RFC4-213ENST00000489028 RPN1P04843 607 aaKnown RBP2.91□□□□□ -1.94
RFC4-213ENST00000489028 AOC1P19801 751 aa2.91□□□□□ -1.94
RFC4-213ENST00000489028 ITIH1P19827 911 aa2.91□□□□□ -1.94
RFC4-213ENST00000489028 ACAT1P24752 427 aaKnown RBP2.91□□□□□ -1.94
RFC4-213ENST00000489028 OXTRP30559 389 aa2.91□□□□□ -1.94
RFC4-213ENST00000489028 SFTPDP35247 375 aa2.91□□□□□ -1.94
RFC4-213ENST00000489028 CAPGP40121 348 aa2.91□□□□□ -1.94
RFC4-213ENST00000489028 PTGER3P43115 390 aa2.91□□□□□ -1.94
RFC4-213ENST00000489028 GMPSP49915 693 aaPredicted RBP2.91□□□□□ -1.94
RFC4-213ENST00000489028 COG2Q14746 738 aa2.91□□□□□ -1.94
RFC4-213ENST00000489028 HYAL4Q2M3T9 481 aa2.91□□□□□ -1.94
RFC4-213ENST00000489028 ATP1A1-AS1Q5TC04 95 aa2.91□□□□□ -1.94
RFC4-213ENST00000489028 ZNF841Q6ZN19 808 aa2.91□□□□□ -1.94
RFC4-213ENST00000489028 OR4D10Q8NGI6 311 aa2.91□□□□□ -1.94
RFC4-213ENST00000489028 NPRL2Q8WTW4 380 aa2.91□□□□□ -1.94
RFC4-213ENST00000489028 P2RX5Q93086 422 aa2.91□□□□□ -1.94
RFC4-213ENST00000489028 VPS33AQ96AX1 596 aa2.91□□□□□ -1.94
RFC4-213ENST00000489028 RMDN1Q96DB5 314 aa2.91□□□□□ -1.94
RFC4-213ENST00000489028 NXPE2Q96DL1 559 aa2.91□□□□□ -1.94
RFC4-213ENST00000489028 PGM2Q96G03 612 aa2.91□□□□□ -1.94
RFC4-213ENST00000489028 RADILQ96JH8 1075 aa2.91□□□□□ -1.94
RFC4-213ENST00000489028 ZNF597Q96LX8 424 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms