RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 DCBLD1Q8N8Z6 715 aa18.59■□□□□ 0.57
CCM2-216ENST00000488727 RCBTB1Q8NDN9 531 aa18.59■□□□□ 0.57
CCM2-216ENST00000488727 SMPDL3AQ92484 453 aa18.59■□□□□ 0.57
CCM2-216ENST00000488727 RHBDF1Q96CC6 855 aa18.59■□□□□ 0.57
CCM2-216ENST00000488727 ZDHHC12Q96GR4 267 aa18.59■□□□□ 0.57
CCM2-216ENST00000488727 CCDC74BQ96LY2 380 aa18.59■□□□□ 0.57
CCM2-216ENST00000488727 MAP3K3Q99759 626 aa18.59■□□□□ 0.57
CCM2-216ENST00000488727 EGFL8Q99944 293 aa18.59■□□□□ 0.57
CCM2-216ENST00000488727 MRPL1Q9BYD6 325 aaKnown RBP18.59■□□□□ 0.57
CCM2-216ENST00000488727 VCX3BQ9H321 246 aa18.59■□□□□ 0.57
CCM2-216ENST00000488727 MID1IP1Q9NPA3 183 aa18.59■□□□□ 0.57
CCM2-216ENST00000488727 CD274Q9NZQ7 290 aa18.59■□□□□ 0.57
CCM2-216ENST00000488727 FAM149AA5PLN7 773 aa18.58■□□□□ 0.57
CCM2-216ENST00000488727 H3BNX3 289 aa18.58■□□□□ 0.57
CCM2-216ENST00000488727 CASQ2O14958 399 aaPredicted RBP18.58■□□□□ 0.57
CCM2-216ENST00000488727 CSO75390 466 aaKnown RBP18.58■□□□□ 0.57
CCM2-216ENST00000488727 CDH13P55290 713 aa18.58■□□□□ 0.57
CCM2-216ENST00000488727 NAE1Q13564 534 aa18.58■□□□□ 0.57
CCM2-216ENST00000488727 FBXO48Q5FWF7 155 aa18.58■□□□□ 0.57
CCM2-216ENST00000488727 HACD2Q6Y1H2 254 aa18.58■□□□□ 0.57
CCM2-216ENST00000488727 RNF111Q6ZNA4 994 aa18.58■□□□□ 0.57
CCM2-216ENST00000488727 TRIM73Q86UV7 250 aa18.58■□□□□ 0.57
CCM2-216ENST00000488727 FAM20CQ8IXL6 584 aa18.58■□□□□ 0.57
CCM2-216ENST00000488727 PDPRQ8NCN5 879 aa18.58■□□□□ 0.57
CCM2-216ENST00000488727 OR2A1Q8NGT9 310 aa18.58■□□□□ 0.57
CCM2-216ENST00000488727 PYCR2Q96C36 320 aa18.58■□□□□ 0.57
CCM2-216ENST00000488727 SLC25A23Q9BV35 468 aa18.58■□□□□ 0.57
CCM2-216ENST00000488727 DNAJC15Q9Y5T4 150 aa18.58■□□□□ 0.57
CCM2-216ENST00000488727 TLCD2A6NGC4 264 aa18.57■□□□□ 0.56
CCM2-216ENST00000488727 ZNF839A8K0R7 811 aa18.57■□□□□ 0.56
CCM2-216ENST00000488727 A8MU76 341 aa18.57■□□□□ 0.56
CCM2-216ENST00000488727 TAPBPO15533 448 aa18.57■□□□□ 0.56
CCM2-216ENST00000488727 TSPAN8P19075 237 aa18.57■□□□□ 0.56
CCM2-216ENST00000488727 ME2P23368 584 aa18.57■□□□□ 0.56
CCM2-216ENST00000488727 EEF1DP29692 281 aaKnown RBP18.57■□□□□ 0.56
CCM2-216ENST00000488727 YBX1P67809 324 aaKnown RBP18.57■□□□□ 0.56
CCM2-216ENST00000488727 MRPS35P82673 323 aaKnown RBP18.57■□□□□ 0.56
CCM2-216ENST00000488727 CLCQ05315 142 aa18.57■□□□□ 0.56
CCM2-216ENST00000488727 TSTA3Q13630 321 aaPredicted RBP18.57■□□□□ 0.56
CCM2-216ENST00000488727 CEACAM7Q14002 265 aa18.57■□□□□ 0.56
CCM2-216ENST00000488727 PHF19Q5T6S3 580 aa18.57■□□□□ 0.56
CCM2-216ENST00000488727 REP15Q6BDI9 236 aa18.57■□□□□ 0.56
CCM2-216ENST00000488727 DGLUCYQ7Z3D6 616 aa18.57■□□□□ 0.56
CCM2-216ENST00000488727 ARHGAP22Q7Z5H3 698 aa18.57■□□□□ 0.56
CCM2-216ENST00000488727 TMPRSS12Q86WS5 348 aa18.57■□□□□ 0.56
CCM2-216ENST00000488727 OR56A3Q8NH54 315 aa18.57■□□□□ 0.56
CCM2-216ENST00000488727 ZNF483Q8TF39 744 aaPredicted RBP18.57■□□□□ 0.56
CCM2-216ENST00000488727 TWIST2Q8WVJ9 160 aa18.57■□□□□ 0.56
CCM2-216ENST00000488727 ATL1Q8WXF7 558 aa18.57■□□□□ 0.56
CCM2-216ENST00000488727 MED8Q96G25 268 aa18.57■□□□□ 0.56
CCM2-216ENST00000488727 DEPDC7Q96QD5 511 aa18.57■□□□□ 0.56
CCM2-216ENST00000488727 NPAS2Q99743 824 aa18.57■□□□□ 0.56
CCM2-216ENST00000488727 ECSITQ9BQ95 431 aa18.57■□□□□ 0.56
CCM2-216ENST00000488727 TMEM79Q9BSE2 394 aa18.57■□□□□ 0.56
CCM2-216ENST00000488727 ACAT2Q9BWD1 397 aa18.57■□□□□ 0.56
CCM2-216ENST00000488727 NUDT4Q9NZJ9 180 aa18.57■□□□□ 0.56
CCM2-216ENST00000488727 KNTC1P50748 2209 aa18.57■□□□□ 0.56
CCM2-216ENST00000488727 IGHV5-51A0A0C4DH38 117 aa18.57■□□□□ 0.56
CCM2-216ENST00000488727 LRRC14BA6NHZ5 514 aa18.57■□□□□ 0.56
CCM2-216ENST00000488727 VPS4BO75351 444 aa18.57■□□□□ 0.56
CCM2-216ENST00000488727 SNRPB2P08579 225 aaKnown RBP18.57■□□□□ 0.56
CCM2-216ENST00000488727 PVRP15151 417 aa18.57■□□□□ 0.56
CCM2-216ENST00000488727 CCKBRP32239 447 aa18.57■□□□□ 0.56
CCM2-216ENST00000488727 ERFP50548 548 aa18.57■□□□□ 0.56
CCM2-216ENST00000488727 KLC1Q07866 573 aa18.57■□□□□ 0.56
CCM2-216ENST00000488727 GSTA3Q16772 222 aa18.57■□□□□ 0.56
CCM2-216ENST00000488727 PTCHD3Q3KNS1 767 aa18.57■□□□□ 0.56
CCM2-216ENST00000488727 AGKQ53H12 422 aa18.57■□□□□ 0.56
CCM2-216ENST00000488727 CDKL4Q5MAI5 379 aa18.57■□□□□ 0.56
CCM2-216ENST00000488727 CACHD1Q5VU97 1274 aa18.57■□□□□ 0.56
CCM2-216ENST00000488727 ZFP1Q6P2D0 407 aa18.57■□□□□ 0.56
CCM2-216ENST00000488727 TMPRSS7Q7RTY8 843 aa18.57■□□□□ 0.56
CCM2-216ENST00000488727 PRSS42Q7Z5A4 293 aa18.57■□□□□ 0.56
CCM2-216ENST00000488727 ESAMQ96AP7 390 aa18.57■□□□□ 0.56
CCM2-216ENST00000488727 SLC22A18Q96BI1 424 aa18.57■□□□□ 0.56
CCM2-216ENST00000488727 C3orf30Q96M34 536 aa18.57■□□□□ 0.56
CCM2-216ENST00000488727 TMEM74Q96NL1 305 aa18.57■□□□□ 0.56
CCM2-216ENST00000488727 CD180Q99467 661 aa18.57■□□□□ 0.56
CCM2-216ENST00000488727 SGPP1Q9BX95 441 aa18.57■□□□□ 0.56
CCM2-216ENST00000488727 CCDC177Q9NQR7 707 aaPredicted RBP18.57■□□□□ 0.56
CCM2-216ENST00000488727 INTS7Q9NVH2 962 aaKnown RBP18.57■□□□□ 0.56
CCM2-216ENST00000488727 SEMA5BQ9P283 1151 aa18.57■□□□□ 0.56
CCM2-216ENST00000488727 TAC3Q9UHF0 121 aa18.57■□□□□ 0.56
CCM2-216ENST00000488727 AGRPO00253 132 aa18.56■□□□□ 0.56
CCM2-216ENST00000488727 HYAL3O43820 417 aaPredicted RBP18.56■□□□□ 0.56
CCM2-216ENST00000488727 JUPP14923 745 aa18.56■□□□□ 0.56
CCM2-216ENST00000488727 CDH3P22223 829 aa18.56■□□□□ 0.56
CCM2-216ENST00000488727 MRPL19P49406 292 aaKnown RBP18.56■□□□□ 0.56
CCM2-216ENST00000488727 HNMTP50135 292 aa18.56■□□□□ 0.56
CCM2-216ENST00000488727 STX1BP61266 288 aa18.56■□□□□ 0.56
CCM2-216ENST00000488727 TARDBPQ13148 414 aaKnown RBP eCLIP18.56■□□□□ 0.56
CCM2-216ENST00000488727 C16orf72Q14CZ0 275 aa18.56■□□□□ 0.56
CCM2-216ENST00000488727 SULT1C3Q6IMI6 304 aa18.56■□□□□ 0.56
CCM2-216ENST00000488727 IZUMO2Q6UXV1 221 aa18.56■□□□□ 0.56
CCM2-216ENST00000488727 TRPC4APQ8TEL6 797 aa18.56■□□□□ 0.56
CCM2-216ENST00000488727 NSUN5Q96P11 429 aaKnown RBP18.56■□□□□ 0.56
CCM2-216ENST00000488727 KLHL25Q9H0H3 589 aa18.56■□□□□ 0.56
CCM2-216ENST00000488727 AKTIPQ9H8T0 292 aa18.56■□□□□ 0.56
CCM2-216ENST00000488727 C1GALT1Q9NS00 363 aa18.56■□□□□ 0.56
CCM2-216ENST00000488727 PTBP2Q9UKA9 531 aaKnown RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms