RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 NSUN5Q96P11 429 aaKnown RBP9.85□□□□□ -0.83
SKA1-204ENST00000488454 TEFMQ96QE5 360 aaKnown RBP9.85□□□□□ -0.83
SKA1-204ENST00000488454 TRMOQ9BU70 441 aa9.85□□□□□ -0.83
SKA1-204ENST00000488454 MECRQ9BV79 373 aa9.85□□□□□ -0.83
SKA1-204ENST00000488454 NTMT1Q9BV86 223 aa9.85□□□□□ -0.83
SKA1-204ENST00000488454 SCNM1Q9BWG6 230 aa9.85□□□□□ -0.83
SKA1-204ENST00000488454 GATA5Q9BWX5 397 aaPredicted RBP9.85□□□□□ -0.83
SKA1-204ENST00000488454 NRSN2Q9GZP1 204 aa9.85□□□□□ -0.83
SKA1-204ENST00000488454 NT5DC2Q9H857 520 aa9.85□□□□□ -0.83
SKA1-204ENST00000488454 ACSS2Q9NR19 701 aa9.85□□□□□ -0.83
SKA1-204ENST00000488454 GEMIN8Q9NWZ8 242 aaKnown RBP9.85□□□□□ -0.83
SKA1-204ENST00000488454 PILRAQ9UKJ1 303 aa9.85□□□□□ -0.83
SKA1-204ENST00000488454 PCDHGA8Q9Y5G5 932 aa9.85□□□□□ -0.83
SKA1-204ENST00000488454 PCDHGA11Q9Y5H2 935 aa9.85□□□□□ -0.83
SKA1-204ENST00000488454 CNOT1A5YKK6 2376 aaKnown RBP9.85□□□□□ -0.83
SKA1-204ENST00000488454 KCNE1BA0A087WTH5 132 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 TRABD2BA6NFA1 517 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 H0YGG7 62 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 OR7A17O14581 309 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 LCMT2O60294 686 aaKnown RBP9.84□□□□□ -0.83
SKA1-204ENST00000488454 NPHS1O60500 1241 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 HBQ1P09105 142 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 DHRS4L1P0CG22 281 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 PCNAP12004 261 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 FGF5P12034 268 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 ITIH1P19827 911 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 NR1D1P20393 614 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 GRK2P25098 689 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 GSTM2P28161 218 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 AHRP35869 848 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 SERPINB5P36952 375 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 RNF144AP50876 292 aaPredicted RBP9.84□□□□□ -0.83
SKA1-204ENST00000488454 ARF3P61204 181 aaPredicted RBP9.84□□□□□ -0.83
SKA1-204ENST00000488454 PHEXP78562 749 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 REEP5Q00765 189 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 RGS1Q08116 209 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 GRM7Q14831 915 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 CHI3L2Q15782 390 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 CPSF6Q16630 551 aaKnown RBP eCLIP9.84□□□□□ -0.83
SKA1-204ENST00000488454 FAM214AQ32MH5 1076 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 OXLD1Q5BKU9 147 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 WASHC2DQ5SRD0 308 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 MANEAQ5SRI9 462 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 ATG16L1Q676U5 607 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 GRHL2Q6ISB3 625 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 TLDC1Q6P9B6 456 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 FRMD7Q6ZUT3 714 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 GPRIN3Q6ZVF9 776 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 RPS27LQ71UM5 84 aaKnown RBP9.84□□□□□ -0.83
SKA1-204ENST00000488454 ASPGQ86U10 573 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 TMEM126BQ8IUX1 230 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 HOMEZQ8IX15 550 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 CSNK1A1LQ8N752 337 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 BMPERQ8N8U9 685 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 L3MBTL4Q8NA19 623 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 TTC29Q8NA56 475 aaPredicted RBP9.84□□□□□ -0.83
SKA1-204ENST00000488454 PLPP7Q8NBV4 271 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 ZNF740Q8NDX6 193 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 TRPV3Q8NET8 790 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 OR4F6Q8NGB9 312 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 OR52B6Q8NGF0 335 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 MDM1Q8TC05 714 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 SLC13A3Q8WWT9 602 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 CCT6BQ92526 530 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 ZNF501Q96CX3 271 aaPredicted RBP9.84□□□□□ -0.83
SKA1-204ENST00000488454 MOCOSQ96EN8 888 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 SEC16BQ96JE7 1060 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 FCRL4Q96PJ5 515 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 OR2A5Q96R48 311 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 ZNF382Q96SR6 550 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 CTRCQ99895 268 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 NDC1Q9BTX1 674 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 DDA1Q9BW61 102 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 ZBTB26Q9HCK0 441 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 MID1IP1Q9NPA3 183 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 INTS9Q9NV88 658 aaKnown RBP9.84□□□□□ -0.83
SKA1-204ENST00000488454 SIDT1Q9NXL6 827 aaKnown RBP9.84□□□□□ -0.83
SKA1-204ENST00000488454 ADGRE2Q9UHX3 823 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 ZFP69BQ9UJL9 534 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 KLK13Q9UKR3 277 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 SNX6Q9UNH7 406 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 RNF11Q9Y3C5 154 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 NEUROG3Q9Y4Z2 214 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 AP1M2Q9Y6Q5 423 aa9.84□□□□□ -0.83
SKA1-204ENST00000488454 LOC105369274A0A096LPK9 316 aa9.83□□□□□ -0.84
SKA1-204ENST00000488454 LOC102723532A0A0G2JNH3 316 aa9.83□□□□□ -0.84
SKA1-204ENST00000488454 URADA6NGE7 173 aa9.83□□□□□ -0.84
SKA1-204ENST00000488454 ZSCAN9O15535 394 aaPredicted RBP9.83□□□□□ -0.84
SKA1-204ENST00000488454 NRP2O60462 931 aa9.83□□□□□ -0.84
SKA1-204ENST00000488454 SCRG1O75711 98 aa9.83□□□□□ -0.84
SKA1-204ENST00000488454 SNUPNO95149 360 aaKnown RBP9.83□□□□□ -0.84
SKA1-204ENST00000488454 ESRRBO95718 433 aa9.83□□□□□ -0.84
SKA1-204ENST00000488454 SERPINE1P05121 402 aa9.83□□□□□ -0.84
SKA1-204ENST00000488454 ADRB1P08588 477 aa9.83□□□□□ -0.84
SKA1-204ENST00000488454 SLC35G6P0C7Q6 338 aa9.83□□□□□ -0.84
SKA1-204ENST00000488454 SPINK2P20155 84 aa9.83□□□□□ -0.84
SKA1-204ENST00000488454 SERPINB1P30740 379 aa9.83□□□□□ -0.84
SKA1-204ENST00000488454 ETV5P41161 510 aa9.83□□□□□ -0.84
SKA1-204ENST00000488454 BCL6P41182 706 aa9.83□□□□□ -0.84
SKA1-204ENST00000488454 ARSFP54793 590 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms