RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 BAG3O95817 575 aa3.44□□□□□ -1.86
LINC00888-204ENST00000487386 GSRP00390 522 aa3.44□□□□□ -1.86
LINC00888-204ENST00000487386 IGHEP01854 428 aa3.44□□□□□ -1.86
LINC00888-204ENST00000487386 BDNFP23560 247 aa3.44□□□□□ -1.86
LINC00888-204ENST00000487386 AZGP1P25311 298 aaKnown RBP3.44□□□□□ -1.86
LINC00888-204ENST00000487386 OR3A2P47893 321 aa3.44□□□□□ -1.86
LINC00888-204ENST00000487386 LBX1P52954 281 aa3.44□□□□□ -1.86
LINC00888-204ENST00000487386 TMEM50BP56557 158 aa3.44□□□□□ -1.86
LINC00888-204ENST00000487386 DLK1P80370 383 aa3.44□□□□□ -1.86
LINC00888-204ENST00000487386 SRSF9Q13242 221 aaKnown RBP eCLIP3.44□□□□□ -1.86
LINC00888-204ENST00000487386 PRPF4BQ13523 1007 aaKnown RBP3.44□□□□□ -1.86
LINC00888-204ENST00000487386 TRA2AQ13595 282 aaKnown RBP eCLIP3.44□□□□□ -1.86
LINC00888-204ENST00000487386 ENPP2Q13822 863 aa3.44□□□□□ -1.86
LINC00888-204ENST00000487386 TRIM29Q14134 588 aa3.44□□□□□ -1.86
LINC00888-204ENST00000487386 TOMM20Q15388 145 aa3.44□□□□□ -1.86
LINC00888-204ENST00000487386 MTHFSDQ2M296 383 aaKnown RBP3.44□□□□□ -1.86
LINC00888-204ENST00000487386 MOGAT2Q3SYC2 334 aa3.44□□□□□ -1.86
LINC00888-204ENST00000487386 MFSD4BQ5TF39 518 aa3.44□□□□□ -1.86
LINC00888-204ENST00000487386 KRT39Q6A163 491 aa3.44□□□□□ -1.86
LINC00888-204ENST00000487386 RPUSD3Q6P087 351 aaKnown RBP3.44□□□□□ -1.86
LINC00888-204ENST00000487386 ZNF343Q6P1L6 599 aa3.44□□□□□ -1.86
LINC00888-204ENST00000487386 KIF6Q6ZMV9 814 aa3.44□□□□□ -1.86
LINC00888-204ENST00000487386 FRRS1Q6ZNA5 592 aa3.44□□□□□ -1.86
LINC00888-204ENST00000487386 LYG1Q8N1E2 194 aa3.44□□□□□ -1.86
LINC00888-204ENST00000487386 RYBPQ8N488 228 aaPredicted RBP3.44□□□□□ -1.86
LINC00888-204ENST00000487386 KCNE4Q8WWG9 221 aa3.44□□□□□ -1.86
LINC00888-204ENST00000487386 CDCA3Q99618 268 aaPredicted RBP3.44□□□□□ -1.86
LINC00888-204ENST00000487386 OVOL2Q9BRP0 275 aa3.44□□□□□ -1.86
LINC00888-204ENST00000487386 CENPOQ9BU64 300 aa3.44□□□□□ -1.86
LINC00888-204ENST00000487386 LRRC61Q9BV99 259 aa3.44□□□□□ -1.86
LINC00888-204ENST00000487386 ACTL8Q9H568 366 aa3.44□□□□□ -1.86
LINC00888-204ENST00000487386 TXNDC16Q9P2K2 825 aa3.44□□□□□ -1.86
LINC00888-204ENST00000487386 PRDM4Q9UKN5 801 aa3.44□□□□□ -1.86
LINC00888-204ENST00000487386 SMAD5-AS1Q9Y6J3 95 aa3.44□□□□□ -1.86
LINC00888-204ENST00000487386 PPLO60437 1756 aa3.43□□□□□ -1.86
LINC00888-204ENST00000487386 C3P01024 1663 aa3.43□□□□□ -1.86
LINC00888-204ENST00000487386 IQGAP1P46940 1657 aa3.43□□□□□ -1.86
LINC00888-204ENST00000487386 ZNF142P52746 1687 aaPredicted RBP3.43□□□□□ -1.86
LINC00888-204ENST00000487386 SPATA31D1Q6ZQQ2 1576 aa3.43□□□□□ -1.86
LINC00888-204ENST00000487386 ERVK-7P63135 1459 aa3.43□□□□□ -1.86
LINC00888-204ENST00000487386 RALGAPBQ86X10 1494 aa3.43□□□□□ -1.86
LINC00888-204ENST00000487386 MYO5BQ9ULV0 1848 aa3.43□□□□□ -1.86
LINC00888-204ENST00000487386 KRTAP9-6A8MVA2 160 aa3.43□□□□□ -1.86
LINC00888-204ENST00000487386 CCL24O00175 119 aa3.43□□□□□ -1.86
LINC00888-204ENST00000487386 TBX10O75333 385 aa3.43□□□□□ -1.86
LINC00888-204ENST00000487386 RPS6KA5O75582 802 aa3.43□□□□□ -1.86
LINC00888-204ENST00000487386 ELAVL4P26378 380 aaKnown RBP3.43□□□□□ -1.86
LINC00888-204ENST00000487386 RBMS1P29558 406 aaKnown RBP3.43□□□□□ -1.86
LINC00888-204ENST00000487386 TLX1P31314 330 aaPredicted RBP3.43□□□□□ -1.86
LINC00888-204ENST00000487386 TSFMP43897 325 aaKnown RBP3.43□□□□□ -1.86
LINC00888-204ENST00000487386 CDH18Q13634 790 aa3.43□□□□□ -1.86
LINC00888-204ENST00000487386 TMEM132DQ14C87 1099 aa3.43□□□□□ -1.86
LINC00888-204ENST00000487386 SUSD4Q5VX71 490 aa3.43□□□□□ -1.86
LINC00888-204ENST00000487386 KRT80Q6KB66 452 aa3.43□□□□□ -1.86
LINC00888-204ENST00000487386 PAQR6Q6TCH4 344 aa3.43□□□□□ -1.86
LINC00888-204ENST00000487386 ANKRD33Q7Z3H0 272 aa3.43□□□□□ -1.86
LINC00888-204ENST00000487386 RCOR2Q8IZ40 523 aa3.43□□□□□ -1.86
LINC00888-204ENST00000487386 Q8NBF4 154 aa3.43□□□□□ -1.86
LINC00888-204ENST00000487386 EXT2Q93063 718 aa3.43□□□□□ -1.86
LINC00888-204ENST00000487386 C2orf48Q96LS8 159 aa3.43□□□□□ -1.86
LINC00888-204ENST00000487386 GPATCH1Q9BRR8 931 aaKnown RBP3.43□□□□□ -1.86
LINC00888-204ENST00000487386 TDRD1Q9BXT4 1180 aaKnown RBP3.43□□□□□ -1.86
LINC00888-204ENST00000487386 ANKRD2Q9GZV1 360 aa3.43□□□□□ -1.86
LINC00888-204ENST00000487386 HOXD1Q9GZZ0 328 aa3.43□□□□□ -1.86
LINC00888-204ENST00000487386 FZD8Q9H461 694 aa3.43□□□□□ -1.86
LINC00888-204ENST00000487386 NDE1Q9NXR1 346 aa3.43□□□□□ -1.86
LINC00888-204ENST00000487386 ELF5Q9UKW6 265 aaPredicted RBP3.43□□□□□ -1.86
LINC00888-204ENST00000487386 CCL27Q9Y4X3 112 aa3.43□□□□□ -1.86
LINC00888-204ENST00000487386 NPATQ14207 1427 aa3.43□□□□□ -1.86
LINC00888-204ENST00000487386 IGSF1Q8N6C5 1336 aa3.43□□□□□ -1.86
LINC00888-204ENST00000487386 MYOM2P54296 1465 aa3.42□□□□□ -1.86
LINC00888-204ENST00000487386 HEG1Q9ULI3 1381 aa3.42□□□□□ -1.86
LINC00888-204ENST00000487386 LOC105371242A0A075B767 164 aa3.42□□□□□ -1.86
LINC00888-204ENST00000487386 MTMR11A4FU01 709 aa3.42□□□□□ -1.86
LINC00888-204ENST00000487386 PRKAR1AP10644 381 aa3.42□□□□□ -1.86
LINC00888-204ENST00000487386 ZNF10P21506 573 aaPredicted RBP3.42□□□□□ -1.86
LINC00888-204ENST00000487386 GATA2P23769 480 aaPredicted RBP3.42□□□□□ -1.86
LINC00888-204ENST00000487386 ALDH1B1P30837 517 aa3.42□□□□□ -1.86
LINC00888-204ENST00000487386 IRX6P78412 446 aaPredicted RBP3.42□□□□□ -1.86
LINC00888-204ENST00000487386 IRX4P78413 519 aa3.42□□□□□ -1.86
LINC00888-204ENST00000487386 ILF2Q12905 390 aaKnown RBP3.42□□□□□ -1.86
LINC00888-204ENST00000487386 SGCGQ13326 291 aa3.42□□□□□ -1.86
LINC00888-204ENST00000487386 OPCMLQ14982 345 aa3.42□□□□□ -1.86
LINC00888-204ENST00000487386 NONOQ15233 471 aaKnown RBP eCLIP3.42□□□□□ -1.86
LINC00888-204ENST00000487386 RASA2Q15283 850 aa3.42□□□□□ -1.86
LINC00888-204ENST00000487386 PTGISQ16647 500 aa3.42□□□□□ -1.86
LINC00888-204ENST00000487386 LACTB2Q53H82 288 aaPredicted RBP3.42□□□□□ -1.86
LINC00888-204ENST00000487386 TCP11X2Q5H9J9 407 aa3.42□□□□□ -1.86
LINC00888-204ENST00000487386 SLC30A6Q6NXT4 461 aa3.42□□□□□ -1.86
LINC00888-204ENST00000487386 NOTUMQ6P988 496 aa3.42□□□□□ -1.86
LINC00888-204ENST00000487386 FCRLAQ7L513 359 aa3.42□□□□□ -1.86
LINC00888-204ENST00000487386 MFN1Q8IWA4 741 aa3.42□□□□□ -1.86
LINC00888-204ENST00000487386 OR5T2Q8NGG2 359 aa3.42□□□□□ -1.86
LINC00888-204ENST00000487386 C11orf45Q8TAV5 145 aa3.42□□□□□ -1.86
LINC00888-204ENST00000487386 KLHL5Q96PQ7 755 aa3.42□□□□□ -1.86
LINC00888-204ENST00000487386 SLC25A23Q9BV35 468 aa3.42□□□□□ -1.86
LINC00888-204ENST00000487386 NYXQ9GZU5 481 aa3.42□□□□□ -1.86
LINC00888-204ENST00000487386 SDCBP2Q9H190 292 aa3.42□□□□□ -1.86
LINC00888-204ENST00000487386 ST6GALNAC4Q9H4F1 302 aa3.42□□□□□ -1.86
LINC00888-204ENST00000487386 EGLN3Q9H6Z9 239 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms