RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 SOX13Q9UN79 622 aa18.31■□□□□ 0.52
SMPDL3A-202ENST00000487215 KCNE1BA0A087WTH5 132 aa18.3■□□□□ 0.52
SMPDL3A-202ENST00000487215 KIF5CO60282 957 aa18.3■□□□□ 0.52
SMPDL3A-202ENST00000487215 SP1P08047 785 aa18.3■□□□□ 0.52
SMPDL3A-202ENST00000487215 IMPA1P29218 277 aa18.3■□□□□ 0.52
SMPDL3A-202ENST00000487215 RPS15AP62244 130 aaKnown RBP18.3■□□□□ 0.52
SMPDL3A-202ENST00000487215 CSNK1G2P78368 415 aa18.3■□□□□ 0.52
SMPDL3A-202ENST00000487215 CUL1Q13616 776 aa18.3■□□□□ 0.52
SMPDL3A-202ENST00000487215 TTLL9Q3SXZ7 439 aa18.3■□□□□ 0.52
SMPDL3A-202ENST00000487215 SFT2D3Q587I9 215 aa18.3■□□□□ 0.52
SMPDL3A-202ENST00000487215 KIAA0930Q6ICG6 404 aaPredicted RBP18.3■□□□□ 0.52
SMPDL3A-202ENST00000487215 SLC25A25Q6KCM7 469 aa18.3■□□□□ 0.52
SMPDL3A-202ENST00000487215 C3P1Q6ZMU1 363 aa18.3■□□□□ 0.52
SMPDL3A-202ENST00000487215 PDSS2Q86YH6 399 aa18.3■□□□□ 0.52
SMPDL3A-202ENST00000487215 HORMAD2Q8N7B1 307 aa18.3■□□□□ 0.52
SMPDL3A-202ENST00000487215 ZCCHC10Q8TBK6 192 aa18.3■□□□□ 0.52
SMPDL3A-202ENST00000487215 ASB11Q8WXH4 323 aa18.3■□□□□ 0.52
SMPDL3A-202ENST00000487215 DMRTA2Q96SC8 542 aa18.3■□□□□ 0.52
SMPDL3A-202ENST00000487215 LPAR4Q99677 370 aa18.3■□□□□ 0.52
SMPDL3A-202ENST00000487215 DESI2Q9BSY9 194 aa18.3■□□□□ 0.52
SMPDL3A-202ENST00000487215 RBCK1Q9BYM8 510 aa18.3■□□□□ 0.52
SMPDL3A-202ENST00000487215 SCN2AQ99250 2005 aa18.3■□□□□ 0.52
SMPDL3A-202ENST00000487215 E9PLN8 166 aa18.29■□□□□ 0.52
SMPDL3A-202ENST00000487215 ADAM10O14672 748 aa18.29■□□□□ 0.52
SMPDL3A-202ENST00000487215 RDH16O75452 317 aa18.29■□□□□ 0.52
SMPDL3A-202ENST00000487215 F7P08709 466 aaPredicted RBP18.29■□□□□ 0.52
SMPDL3A-202ENST00000487215 SKIV2L2P42285 1042 aaKnown RBP18.29■□□□□ 0.52
SMPDL3A-202ENST00000487215 RHAGQ02094 409 aa18.29■□□□□ 0.52
SMPDL3A-202ENST00000487215 USP10Q14694 798 aaKnown RBP18.29■□□□□ 0.52
SMPDL3A-202ENST00000487215 ABRAXAS2Q15018 415 aa18.29■□□□□ 0.52
SMPDL3A-202ENST00000487215 SIX1Q15475 284 aaPredicted RBP18.29■□□□□ 0.52
SMPDL3A-202ENST00000487215 MEI1Q5TIA1 1274 aa18.29■□□□□ 0.52
SMPDL3A-202ENST00000487215 ZNF468Q5VIY5 522 aaPredicted RBP18.29■□□□□ 0.52
SMPDL3A-202ENST00000487215 MEX3BQ6ZN04 569 aaKnown RBP18.29■□□□□ 0.52
SMPDL3A-202ENST00000487215 FGD2Q7Z6J4 655 aa18.29■□□□□ 0.52
SMPDL3A-202ENST00000487215 CILP2Q8IUL8 1156 aa18.29■□□□□ 0.52
SMPDL3A-202ENST00000487215 LGI4Q8N135 537 aa18.29■□□□□ 0.52
SMPDL3A-202ENST00000487215 PRELID2Q8N945 189 aa18.29■□□□□ 0.52
SMPDL3A-202ENST00000487215 TSLPQ969D9 159 aa18.29■□□□□ 0.52
SMPDL3A-202ENST00000487215 TREX2Q9BQ50 279 aaPredicted RBP18.29■□□□□ 0.52
SMPDL3A-202ENST00000487215 VKORC1Q9BQB6 163 aa18.29■□□□□ 0.52
SMPDL3A-202ENST00000487215 ANKHQ9HCJ1 492 aa18.29■□□□□ 0.52
SMPDL3A-202ENST00000487215 LRFN1Q9P244 771 aa18.29■□□□□ 0.52
SMPDL3A-202ENST00000487215 MED16Q9Y2X0 877 aa18.29■□□□□ 0.52
SMPDL3A-202ENST00000487215 ASB1Q9Y576 335 aa18.29■□□□□ 0.52
SMPDL3A-202ENST00000487215 SETD2Q9BYW2 2564 aaPredicted RBP18.29■□□□□ 0.52
SMPDL3A-202ENST00000487215 CACNA1CQ13936 2221 aa18.29■□□□□ 0.52
SMPDL3A-202ENST00000487215 ZFHX3Q15911 3703 aa18.28■□□□□ 0.52
SMPDL3A-202ENST00000487215 GFYI3L273 518 aa18.28■□□□□ 0.52
SMPDL3A-202ENST00000487215 CDC123O75794 336 aaPredicted RBP18.28■□□□□ 0.52
SMPDL3A-202ENST00000487215 TSPAN12O95859 305 aa18.28■□□□□ 0.52
SMPDL3A-202ENST00000487215 MPC1LP0DKB6 136 aa18.28■□□□□ 0.52
SMPDL3A-202ENST00000487215 ZNF24P17028 368 aa18.28■□□□□ 0.52
SMPDL3A-202ENST00000487215 HRH2P25021 359 aa18.28■□□□□ 0.52
SMPDL3A-202ENST00000487215 SLC26A5P58743 744 aa18.28■□□□□ 0.52
SMPDL3A-202ENST00000487215 TAS2R50P59544 299 aa18.28■□□□□ 0.52
SMPDL3A-202ENST00000487215 ACTN3Q08043 901 aaPredicted RBP18.28■□□□□ 0.52
SMPDL3A-202ENST00000487215 NSDHLQ15738 373 aa18.28■□□□□ 0.52
SMPDL3A-202ENST00000487215 MAPKAPK3Q16644 382 aa18.28■□□□□ 0.52
SMPDL3A-202ENST00000487215 RNFT1Q5M7Z0 435 aa18.28■□□□□ 0.52
SMPDL3A-202ENST00000487215 NEPROQ6NW34 567 aa18.28■□□□□ 0.52
SMPDL3A-202ENST00000487215 KCT2Q8NC54 265 aa18.28■□□□□ 0.52
SMPDL3A-202ENST00000487215 CAMKVQ8NCB2 501 aa18.28■□□□□ 0.52
SMPDL3A-202ENST00000487215 PLPP5Q8NEB5 264 aa18.28■□□□□ 0.52
SMPDL3A-202ENST00000487215 CA5BP1Q8WTZ4 195 aa18.28■□□□□ 0.52
SMPDL3A-202ENST00000487215 SDCCAG3Q96C92 435 aa18.28■□□□□ 0.52
SMPDL3A-202ENST00000487215 TM4SF19Q96DZ7 209 aa18.28■□□□□ 0.52
SMPDL3A-202ENST00000487215 THAP11Q96EK4 314 aa18.28■□□□□ 0.52
SMPDL3A-202ENST00000487215 PEX11GQ96HA9 241 aa18.28■□□□□ 0.52
SMPDL3A-202ENST00000487215 CCDC138Q96M89 665 aa18.28■□□□□ 0.52
SMPDL3A-202ENST00000487215 CDCP1Q9H5V8 836 aa18.28■□□□□ 0.52
SMPDL3A-202ENST00000487215 CCDC177Q9NQR7 707 aaPredicted RBP18.28■□□□□ 0.52
SMPDL3A-202ENST00000487215 LANCL2Q9NS86 450 aa18.28■□□□□ 0.52
SMPDL3A-202ENST00000487215 INTS10Q9NVR2 710 aaKnown RBP18.28■□□□□ 0.52
SMPDL3A-202ENST00000487215 KLHL42Q9P2K6 505 aa18.28■□□□□ 0.52
SMPDL3A-202ENST00000487215 PPT2Q9UMR5 302 aa18.28■□□□□ 0.52
SMPDL3A-202ENST00000487215 VPS9D1Q9Y2B5 631 aa18.28■□□□□ 0.52
SMPDL3A-202ENST00000487215 NF1P21359 2839 aa18.27■□□□□ 0.52
SMPDL3A-202ENST00000487215 TCRBV7S3A2A0A539 114 aa18.27■□□□□ 0.52
SMPDL3A-202ENST00000487215 PRRG2O14669 202 aa18.27■□□□□ 0.52
SMPDL3A-202ENST00000487215 NDC80O14777 642 aa18.27■□□□□ 0.52
SMPDL3A-202ENST00000487215 ZBTB14O43829 449 aa18.27■□□□□ 0.52
SMPDL3A-202ENST00000487215 NME2P1O60361 137 aa18.27■□□□□ 0.52
SMPDL3A-202ENST00000487215 SLC25A12O75746 678 aa18.27■□□□□ 0.52
SMPDL3A-202ENST00000487215 NME2P22392 152 aa18.27■□□□□ 0.52
SMPDL3A-202ENST00000487215 COILP38432 576 aaPredicted RBP18.27■□□□□ 0.52
SMPDL3A-202ENST00000487215 TBPL1P62380 186 aa18.27■□□□□ 0.52
SMPDL3A-202ENST00000487215 RPS6KA1Q15418 735 aa18.27■□□□□ 0.52
SMPDL3A-202ENST00000487215 CCNG2Q16589 344 aa18.27■□□□□ 0.52
SMPDL3A-202ENST00000487215 KCTD19Q17RG1 926 aaPredicted RBP18.27■□□□□ 0.52
SMPDL3A-202ENST00000487215 C4orf22Q6V702 233 aa18.27■□□□□ 0.52
SMPDL3A-202ENST00000487215 CYHR1Q6ZMK1 362 aa18.27■□□□□ 0.52
SMPDL3A-202ENST00000487215 ASPGQ86U10 573 aa18.27■□□□□ 0.52
SMPDL3A-202ENST00000487215 TMEM139Q8IV31 216 aa18.27■□□□□ 0.52
SMPDL3A-202ENST00000487215 CPSF7Q8N684 471 aaKnown RBP18.27■□□□□ 0.52
SMPDL3A-202ENST00000487215 OLFM1Q99784 485 aa18.27■□□□□ 0.52
SMPDL3A-202ENST00000487215 RBSNQ9H1K0 784 aa18.27■□□□□ 0.52
SMPDL3A-202ENST00000487215 SH2B3Q9UQQ2 575 aa18.27■□□□□ 0.52
SMPDL3A-202ENST00000487215 NAALAD2Q9Y3Q0 740 aa18.27■□□□□ 0.52
SMPDL3A-202ENST00000487215 NEU2Q9Y3R4 380 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms