RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 YTHDC2Q9H6S0 1430 aaKnown RBP4.5□□□□□ -1.69
PRPF38A-203ENST00000487160 P2RY10O00398 339 aa4.5□□□□□ -1.69
PRPF38A-203ENST00000487160 SLC33A1O00400 549 aaPredicted RBP4.5□□□□□ -1.69
PRPF38A-203ENST00000487160 NME6O75414 186 aaPredicted RBP4.5□□□□□ -1.69
PRPF38A-203ENST00000487160 CAVIN2O95810 425 aa4.5□□□□□ -1.69
PRPF38A-203ENST00000487160 APOHP02749 345 aaPredicted RBP4.5□□□□□ -1.69
PRPF38A-203ENST00000487160 EEF2P13639 858 aaKnown RBP4.5□□□□□ -1.69
PRPF38A-203ENST00000487160 DARSP14868 501 aaKnown RBP4.5□□□□□ -1.69
PRPF38A-203ENST00000487160 ITIH1P19827 911 aa4.5□□□□□ -1.69
PRPF38A-203ENST00000487160 CA6P23280 308 aa4.5□□□□□ -1.69
PRPF38A-203ENST00000487160 ALDH1B1P30837 517 aa4.5□□□□□ -1.69
PRPF38A-203ENST00000487160 CEACAM8P31997 349 aaPredicted RBP4.5□□□□□ -1.69
PRPF38A-203ENST00000487160 DLX5P56178 289 aa4.5□□□□□ -1.69
PRPF38A-203ENST00000487160 ASIC1P78348 528 aa4.5□□□□□ -1.69
PRPF38A-203ENST00000487160 FOLH1Q04609 750 aa4.5□□□□□ -1.69
PRPF38A-203ENST00000487160 CACNG1Q06432 222 aa4.5□□□□□ -1.69
PRPF38A-203ENST00000487160 TAF13Q15543 124 aa4.5□□□□□ -1.69
PRPF38A-203ENST00000487160 ZRSR1Q15695 479 aaKnown RBP4.5□□□□□ -1.69
PRPF38A-203ENST00000487160 SMU1Q2TAY7 513 aa4.5□□□□□ -1.69
PRPF38A-203ENST00000487160 ODF2Q5BJF6 829 aa4.5□□□□□ -1.69
PRPF38A-203ENST00000487160 FAM76BQ5HYJ3 339 aa4.5□□□□□ -1.69
PRPF38A-203ENST00000487160 SLC35D3Q5M8T2 416 aa4.5□□□□□ -1.69
PRPF38A-203ENST00000487160 C20orf194Q5TEA3 1177 aa4.5□□□□□ -1.69
PRPF38A-203ENST00000487160 LYSMD4Q5XG99 296 aa4.5□□□□□ -1.69
PRPF38A-203ENST00000487160 C19orf48Q6RUI8 117 aa4.5□□□□□ -1.69
PRPF38A-203ENST00000487160 RBMS3Q6XE24 437 aaKnown RBP4.5□□□□□ -1.69
PRPF38A-203ENST00000487160 SLC26A9Q7LBE3 791 aa4.5□□□□□ -1.69
PRPF38A-203ENST00000487160 CREBRFQ8IUR6 639 aa4.5□□□□□ -1.69
PRPF38A-203ENST00000487160 UNC45BQ8IWX7 931 aa4.5□□□□□ -1.69
PRPF38A-203ENST00000487160 CARNMT1Q8N4J0 409 aa4.5□□□□□ -1.69
PRPF38A-203ENST00000487160 STPG4Q8N801 248 aa4.5□□□□□ -1.69
PRPF38A-203ENST00000487160 SEPT1Q8WYJ6 367 aa4.5□□□□□ -1.69
PRPF38A-203ENST00000487160 TM9SF4Q92544 642 aa4.5□□□□□ -1.69
PRPF38A-203ENST00000487160 TEKT1Q969V4 418 aa4.5□□□□□ -1.69
PRPF38A-203ENST00000487160 GDAP1L1Q96MZ0 367 aa4.5□□□□□ -1.69
PRPF38A-203ENST00000487160 NDNQ99608 321 aa4.5□□□□□ -1.69
PRPF38A-203ENST00000487160 MAP3K3Q99759 626 aa4.5□□□□□ -1.69
PRPF38A-203ENST00000487160 LSG1Q9H089 658 aaKnown RBP4.5□□□□□ -1.69
PRPF38A-203ENST00000487160 ACTL8Q9H568 366 aa4.5□□□□□ -1.69
PRPF38A-203ENST00000487160 PHPT1Q9NRX4 125 aaPredicted RBP4.5□□□□□ -1.69
PRPF38A-203ENST00000487160 PKD2L2Q9NZM6 624 aa4.5□□□□□ -1.69
PRPF38A-203ENST00000487160 CNIH4Q9P003 139 aa4.5□□□□□ -1.69
PRPF38A-203ENST00000487160 CHKBQ9Y259 395 aa4.5□□□□□ -1.69
PRPF38A-203ENST00000487160 KIAA0232Q92628 1395 aa4.5□□□□□ -1.69
PRPF38A-203ENST00000487160 ABCC11Q96J66 1382 aa4.5□□□□□ -1.69
PRPF38A-203ENST00000487160 BTAF1O14981 1849 aa4.49□□□□□ -1.69
PRPF38A-203ENST00000487160 OVOS2A0A0G2JMS6 1433 aa4.49□□□□□ -1.69
PRPF38A-203ENST00000487160 OVOS2A0A0J9YW53 1432 aa4.49□□□□□ -1.69
PRPF38A-203ENST00000487160 PIK3C2GO75747 1445 aa4.49□□□□□ -1.69
PRPF38A-203ENST00000487160 OVOS2Q6IE36 1432 aa4.49□□□□□ -1.69
PRPF38A-203ENST00000487160 SSH2Q76I76 1423 aa4.49□□□□□ -1.69
PRPF38A-203ENST00000487160 ANKARQ7Z5J8 1434 aa4.49□□□□□ -1.69
PRPF38A-203ENST00000487160 NHSQ6T4R5 1651 aa4.49□□□□□ -1.69
PRPF38A-203ENST00000487160 PRSS46E5RG02 174 aa4.49□□□□□ -1.69
PRPF38A-203ENST00000487160 CCL24O00175 119 aa4.49□□□□□ -1.69
PRPF38A-203ENST00000487160 BMPR1BO00238 502 aa4.49□□□□□ -1.69
PRPF38A-203ENST00000487160 CTDSPLO15194 276 aa4.49□□□□□ -1.69
PRPF38A-203ENST00000487160 LMX1BO60663 402 aa4.49□□□□□ -1.69
PRPF38A-203ENST00000487160 NGFP01138 241 aa4.49□□□□□ -1.69
PRPF38A-203ENST00000487160 C9P02748 559 aa4.49□□□□□ -1.69
PRPF38A-203ENST00000487160 ATP6V1B1P15313 513 aa4.49□□□□□ -1.69
PRPF38A-203ENST00000487160 CCND3P30281 292 aaPredicted RBP4.49□□□□□ -1.69
PRPF38A-203ENST00000487160 ST8SIA6P61647 398 aa4.49□□□□□ -1.69
PRPF38A-203ENST00000487160 SULT2A1Q06520 285 aa4.49□□□□□ -1.69
PRPF38A-203ENST00000487160 TRAP1Q12931 704 aaKnown RBP4.49□□□□□ -1.69
PRPF38A-203ENST00000487160 PPP2R5CQ13362 524 aa4.49□□□□□ -1.69
PRPF38A-203ENST00000487160 RBBP7Q16576 425 aa4.49□□□□□ -1.69
PRPF38A-203ENST00000487160 SLC25A53Q5H9E4 307 aa4.49□□□□□ -1.69
PRPF38A-203ENST00000487160 PRSS55Q6UWB4 352 aaPredicted RBP4.49□□□□□ -1.69
PRPF38A-203ENST00000487160 PIGWQ7Z7B1 504 aa4.49□□□□□ -1.69
PRPF38A-203ENST00000487160 TRPT1Q86TN4 253 aaKnown RBP4.49□□□□□ -1.69
PRPF38A-203ENST00000487160 C10orf53Q8N6V4 93 aa4.49□□□□□ -1.69
PRPF38A-203ENST00000487160 KLHDC1Q8N7A1 406 aa4.49□□□□□ -1.69
PRPF38A-203ENST00000487160 CCDC63Q8NA47 563 aa4.49□□□□□ -1.69
PRPF38A-203ENST00000487160 TSACCQ96A04 125 aaPredicted RBP4.49□□□□□ -1.69
PRPF38A-203ENST00000487160 SENP5Q96HI0 755 aaPredicted RBP4.49□□□□□ -1.69
PRPF38A-203ENST00000487160 LMLNQ96KR4 655 aa4.49□□□□□ -1.69
PRPF38A-203ENST00000487160 AK8Q96MA6 479 aa4.49□□□□□ -1.69
PRPF38A-203ENST00000487160 CDK19Q9BWU1 502 aa4.49□□□□□ -1.69
PRPF38A-203ENST00000487160 ZNF350Q9GZX5 532 aa4.49□□□□□ -1.69
PRPF38A-203ENST00000487160 CPVLQ9H3G5 476 aa4.49□□□□□ -1.69
PRPF38A-203ENST00000487160 RIMS4Q9H426 269 aaPredicted RBP4.49□□□□□ -1.69
PRPF38A-203ENST00000487160 ZNF334Q9HCZ1 680 aaPredicted RBP4.49□□□□□ -1.69
PRPF38A-203ENST00000487160 CHST11Q9NPF2 352 aa4.49□□□□□ -1.69
PRPF38A-203ENST00000487160 FLRT3Q9NZU0 649 aa4.49□□□□□ -1.69
PRPF38A-203ENST00000487160 KCNG2Q9UJ96 466 aa4.49□□□□□ -1.69
PRPF38A-203ENST00000487160 GMEB2Q9UKD1 530 aa4.49□□□□□ -1.69
PRPF38A-203ENST00000487160 TNNQ9UQP3 1299 aa4.49□□□□□ -1.69
PRPF38A-203ENST00000487160 RUVBL2Q9Y230 463 aaKnown RBP4.49□□□□□ -1.69
PRPF38A-203ENST00000487160 SNX5Q9Y5X3 404 aa4.49□□□□□ -1.69
PRPF38A-203ENST00000487160 SCN5AQ14524 2016 aa4.49□□□□□ -1.69
PRPF38A-203ENST00000487160 ARHGEF28Q8N1W1 1705 aaKnown RBP4.49□□□□□ -1.69
PRPF38A-203ENST00000487160 ATP7BP35670 1465 aa4.49□□□□□ -1.69
PRPF38A-203ENST00000487160 RPGRIP1LQ68CZ1 1315 aa4.48□□□□□ -1.69
PRPF38A-203ENST00000487160 TULP4Q9NRJ4 1543 aa4.48□□□□□ -1.69
PRPF38A-203ENST00000487160 IGHV4-61A0A0C4DH41 118 aa4.48□□□□□ -1.69
PRPF38A-203ENST00000487160 LRRD1A4D1F6 860 aa4.48□□□□□ -1.69
PRPF38A-203ENST00000487160 FAM172BPA6NC97 362 aa4.48□□□□□ -1.69
PRPF38A-203ENST00000487160 SDR42E2A6NKP2 422 aa4.48□□□□□ -1.69
PRPF38A-203ENST00000487160 C17orf105B2RV13 164 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms