RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 CCDC163A0A0D9SF12 145 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 FAM221BA6H8Z2 402 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 H7BY64 318 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 TLR4O00206 839 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 NDUFB5O43674 189 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 OR1F1O43749 312 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 PRICKLE3O43900 615 aaPredicted RBP6.76□□□□□ -1.33
SF3A3-206ENST00000487062 PCDH7O60245 1069 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 DNAJA2O60884 412 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 ERN1O75460 977 aaKnown RBP6.76□□□□□ -1.33
SF3A3-206ENST00000487062 CLEC3AO75596 197 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 FKBP9O95302 570 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 TGFB1P01137 390 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 PGRP06401 933 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 DCNP07585 359 aaKnown RBP6.76□□□□□ -1.33
SF3A3-206ENST00000487062 CHRM5P08912 532 aaPredicted RBP6.76□□□□□ -1.33
SF3A3-206ENST00000487062 DDX5P17844 614 aaKnown RBP6.76□□□□□ -1.33
SF3A3-206ENST00000487062 PSMB5P28074 263 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 HPCAL1P37235 193 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 DPP6P42658 865 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 GSTM5P46439 218 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 DGKQP52824 942 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 EEFSECP57772 596 aaKnown RBP6.76□□□□□ -1.33
SF3A3-206ENST00000487062 C21orf58P58505 322 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 CSNK1G2P78368 415 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 ZXDAP98168 799 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 LRRC74AQ0VAA2 488 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 BNIP2Q12982 314 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 MAP7Q14244 749 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 TRIM25Q14258 630 aaKnown RBP6.76□□□□□ -1.33
SF3A3-206ENST00000487062 TCEA2Q15560 299 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 PGS1Q32NB8 556 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 PRRT3Q5FWE3 981 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 PAGE3Q5JUK9 113 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 SPANXN4Q5MJ08 99 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 WDR45BQ5MNZ6 344 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 C6orf10Q5SRN2 563 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 DEPDC1Q5TB30 811 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 GALNT18Q6P9A2 607 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 SLC2A7Q6PXP3 512 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 R3HCC1LQ7Z5L2 792 aaKnown RBP6.76□□□□□ -1.33
SF3A3-206ENST00000487062 SLC9B2Q86UD5 537 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 GKN2Q86XP6 184 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.76□□□□□ -1.33
SF3A3-206ENST00000487062 METTL4Q8N3J2 472 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 SDR16C5Q8N3Y7 309 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 DEFB119Q8N690 84 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 KRTCAP2Q8N6L1 136 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 ENDOVQ8N8Q3 282 aaKnown RBP6.76□□□□□ -1.33
SF3A3-206ENST00000487062 ZNF740Q8NDX6 193 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 TRPV3Q8NET8 790 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 VPS37AQ8NEZ2 397 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 GPR156Q8NFN8 814 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 OR2L3Q8NG85 312 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 OR4E2Q8NGC2 313 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 CLHC1Q8NHS4 586 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 CDC26Q8NHZ8 85 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 NELL1Q92832 810 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 ASB9Q96DX5 294 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 ITCHQ96J02 903 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 LRGUKQ96M69 825 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 HSPA12BQ96MM6 686 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 PRAP1Q96NZ9 151 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 ORAI3Q9BRQ5 295 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 GPATCH1Q9BRR8 931 aaKnown RBP6.76□□□□□ -1.33
SF3A3-206ENST00000487062 EBPLQ9BY08 206 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 MS4A8Q9BY19 250 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 TRIM15Q9C019 465 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 MIR1-1HGQ9H1L0 117 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 SPNS1Q9H2V7 528 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 OR51B5Q9H339 312 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 MUC13Q9H3R2 512 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 FAM120CQ9NX05 1096 aaKnown RBP6.76□□□□□ -1.33
SF3A3-206ENST00000487062 STOML1Q9UBI4 398 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 ABCD2Q9UBJ2 740 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 SPASTQ9UBP0 616 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 MUTYHQ9UIF7 546 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 MCM8Q9UJA3 840 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 PNMA8BQ9ULN7 279 aaPredicted RBP6.76□□□□□ -1.33
SF3A3-206ENST00000487062 INVSQ9Y283 1065 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 WBP11Q9Y2W2 641 aaKnown RBP6.76□□□□□ -1.33
SF3A3-206ENST00000487062 ENTPD2Q9Y5L3 495 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 CROCCQ5TZA2 2017 aa6.76□□□□□ -1.33
SF3A3-206ENST00000487062 ARHGEF17Q96PE2 2063 aaPredicted RBP6.75□□□□□ -1.33
SF3A3-206ENST00000487062 THADAQ6YHU6 1953 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 A0A1W2PR77 199 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 ARHGAP10A1A4S6 786 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 ASPDHA6ND91 283 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 TMEM229AB2RXF0 380 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 H0Y3Z8 333 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 K7ESF4 209 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 FXYD1O00168 92 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 NME4O00746 187 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 SCAMP2O15127 329 aaKnown RBP6.75□□□□□ -1.33
SF3A3-206ENST00000487062 ZW10O43264 779 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 AKAP10O43572 662 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 SH3BGRLO75368 114 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 BCAS2O75934 225 aaPredicted RBP6.75□□□□□ -1.33
SF3A3-206ENST00000487062 KRT36O76013 467 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 LRATO95237 230 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms