RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 CDK5R2Q13319 367 aa17.31■□□□□ 0.36
PDLIM7-207ENST00000486828 KEAP1Q14145 624 aa17.31■□□□□ 0.36
PDLIM7-207ENST00000486828 C10orf62Q5T681 223 aaPredicted RBP17.31■□□□□ 0.36
PDLIM7-207ENST00000486828 ZNF765Q7L2R6 523 aa17.31■□□□□ 0.36
PDLIM7-207ENST00000486828 PIWIL3Q7Z3Z3 882 aaKnown RBP17.31■□□□□ 0.36
PDLIM7-207ENST00000486828 TRIM74Q86UV6 250 aa17.31■□□□□ 0.36
PDLIM7-207ENST00000486828 ZFP90Q8TF47 636 aa17.31■□□□□ 0.36
PDLIM7-207ENST00000486828 RAB2BQ8WUD1 216 aa17.31■□□□□ 0.36
PDLIM7-207ENST00000486828 NUS1Q96E22 293 aa17.31■□□□□ 0.36
PDLIM7-207ENST00000486828 OR2AG1Q9H205 316 aa17.31■□□□□ 0.36
PDLIM7-207ENST00000486828 SIRT5Q9NXA8 310 aa17.31■□□□□ 0.36
PDLIM7-207ENST00000486828 ATP6V1HQ9UI12 483 aa17.31■□□□□ 0.36
PDLIM7-207ENST00000486828 DYRK1BQ9Y463 629 aa17.31■□□□□ 0.36
PDLIM7-207ENST00000486828 AP1M2Q9Y6Q5 423 aa17.31■□□□□ 0.36
PDLIM7-207ENST00000486828 FOXE1O00358 373 aaPredicted RBP17.31■□□□□ 0.36
PDLIM7-207ENST00000486828 RNASET2O00584 256 aaKnown RBP17.31■□□□□ 0.36
PDLIM7-207ENST00000486828 ADH1CP00326 375 aa17.31■□□□□ 0.36
PDLIM7-207ENST00000486828 ABCB1P08183 1280 aaPredicted RBP17.31■□□□□ 0.36
PDLIM7-207ENST00000486828 CCNA2P20248 432 aa17.31■□□□□ 0.36
PDLIM7-207ENST00000486828 ITGB7P26010 798 aa17.31■□□□□ 0.36
PDLIM7-207ENST00000486828 IRS1P35568 1242 aa17.31■□□□□ 0.36
PDLIM7-207ENST00000486828 ENTPD1P49961 510 aa17.31■□□□□ 0.36
PDLIM7-207ENST00000486828 ITGA1P56199 1179 aa17.31■□□□□ 0.36
PDLIM7-207ENST00000486828 IL5RAQ01344 420 aa17.31■□□□□ 0.36
PDLIM7-207ENST00000486828 NFATC3Q12968 1075 aa17.31■□□□□ 0.36
PDLIM7-207ENST00000486828 GAB1Q13480 694 aa17.31■□□□□ 0.36
PDLIM7-207ENST00000486828 LAPTM4AQ15012 233 aa17.31■□□□□ 0.36
PDLIM7-207ENST00000486828 RGNQ15493 299 aa17.31■□□□□ 0.36
PDLIM7-207ENST00000486828 CATSPEREQ5SY80 951 aa17.31■□□□□ 0.36
PDLIM7-207ENST00000486828 TRAPPC5Q8IUR0 188 aa17.31■□□□□ 0.36
PDLIM7-207ENST00000486828 CROCCP3Q8IVE0 287 aa17.31■□□□□ 0.36
PDLIM7-207ENST00000486828 ARRDC3Q96B67 414 aa17.31■□□□□ 0.36
PDLIM7-207ENST00000486828 SAMD11Q96NU1 681 aa17.31■□□□□ 0.36
PDLIM7-207ENST00000486828 EFCAB11Q9BUY7 163 aa17.31■□□□□ 0.36
PDLIM7-207ENST00000486828 SGPP1Q9BX95 441 aa17.31■□□□□ 0.36
PDLIM7-207ENST00000486828 RIBC2Q9H4K1 309 aa17.31■□□□□ 0.36
PDLIM7-207ENST00000486828 EXD2Q9NVH0 621 aa17.31■□□□□ 0.36
PDLIM7-207ENST00000486828 ZNF282Q9UDV7 671 aaPredicted RBP17.31■□□□□ 0.36
PDLIM7-207ENST00000486828 VPS4AQ9UN37 437 aa17.31■□□□□ 0.36
PDLIM7-207ENST00000486828 EXO1Q9UQ84 846 aaKnown RBP17.31■□□□□ 0.36
PDLIM7-207ENST00000486828 MRPS23Q9Y3D9 190 aaKnown RBP17.31■□□□□ 0.36
PDLIM7-207ENST00000486828 SNX5Q9Y5X3 404 aa17.31■□□□□ 0.36
PDLIM7-207ENST00000486828 HSPE1-MOB4S4R3N1 261 aa17.31■□□□□ 0.36
PDLIM7-207ENST00000486828 DIRAS1O95057 198 aa17.3■□□□□ 0.36
PDLIM7-207ENST00000486828 NUDT7P0C024 238 aa17.3■□□□□ 0.36
PDLIM7-207ENST00000486828 C1GALT1C1LP0DN25 315 aa17.3■□□□□ 0.36
PDLIM7-207ENST00000486828 ELP6Q0PNE2 266 aa17.3■□□□□ 0.36
PDLIM7-207ENST00000486828 SLBPQ14493 270 aaKnown RBP eCLIP17.3■□□□□ 0.36
PDLIM7-207ENST00000486828 C9orf50Q5SZB4 431 aa17.3■□□□□ 0.36
PDLIM7-207ENST00000486828 PDE12Q6L8Q7 609 aaKnown RBP17.3■□□□□ 0.36
PDLIM7-207ENST00000486828 XKR5Q6UX68 686 aa17.3■□□□□ 0.36
PDLIM7-207ENST00000486828 LAS2Q8IYD9 372 aa17.3■□□□□ 0.36
PDLIM7-207ENST00000486828 TMIEQ8NEW7 156 aa17.3■□□□□ 0.36
PDLIM7-207ENST00000486828 BPIFB6Q8NFQ5 453 aa17.3■□□□□ 0.36
PDLIM7-207ENST00000486828 OR4A15Q8NGL6 344 aa17.3■□□□□ 0.36
PDLIM7-207ENST00000486828 OR9A1PQ8NGU1 263 aa17.3■□□□□ 0.36
PDLIM7-207ENST00000486828 B4GALNT2Q8NHY0 566 aa17.3■□□□□ 0.36
PDLIM7-207ENST00000486828 MUL1Q969V5 352 aa17.3■□□□□ 0.36
PDLIM7-207ENST00000486828 NXPE3Q969Y0 559 aa17.3■□□□□ 0.36
PDLIM7-207ENST00000486828 NODALQ96S42 347 aa17.3■□□□□ 0.36
PDLIM7-207ENST00000486828 BHLHE41Q9C0J9 482 aaPredicted RBP17.3■□□□□ 0.36
PDLIM7-207ENST00000486828 MTIF3Q9H2K0 278 aaKnown RBP17.3■□□□□ 0.36
PDLIM7-207ENST00000486828 GPN2Q9H9Y4 310 aaPredicted RBP17.3■□□□□ 0.36
PDLIM7-207ENST00000486828 PAK1IP1Q9NWT1 392 aaPredicted RBP17.3■□□□□ 0.36
PDLIM7-207ENST00000486828 SH3BP4Q9P0V3 963 aa17.3■□□□□ 0.36
PDLIM7-207ENST00000486828 FAF1Q9UNN5 650 aaPredicted RBP17.3■□□□□ 0.36
PDLIM7-207ENST00000486828 SH2B3Q9UQQ2 575 aa17.3■□□□□ 0.36
PDLIM7-207ENST00000486828 SAMHD1Q9Y3Z3 626 aaKnown RBP17.3■□□□□ 0.36
PDLIM7-207ENST00000486828 PRRC2BQ5JSZ5 2229 aaKnown RBP17.3■□□□□ 0.36
PDLIM7-207ENST00000486828 K7ESM1 405 aa17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 M0QX08 132 aa17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 DPM1O60762 260 aa17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 JRKO75564 520 aa17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 DNAJB5O75953 348 aa17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 ITIH1P19827 911 aa17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 CD247P20963 164 aa17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 PCGF2P35227 344 aa17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 GPR1P46091 355 aa17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 PLA2G16P53816 162 aa17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 PIGFQ07326 219 aa17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 ZNF763Q0D2J5 394 aa17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 STARD3Q14849 445 aa17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 ZNF385BQ569K4 471 aa17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 PAGE2BQ5JRK9 111 aa17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 RAET1GQ6H3X3 334 aa17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 CNIH3Q8TBE1 160 aa17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 TBC1D15Q8TC07 691 aa17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 EZH1Q92800 747 aaPredicted RBP17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 ZNF707Q96C28 371 aaPredicted RBP17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 EHD1Q9H4M9 534 aa17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 REEP4Q9H6H4 257 aa17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 REEP1Q9H902 201 aa17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 DMRT3Q9NQL9 472 aa17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 ITM2CQ9NQX7 267 aa17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 PDP1Q9P0J1 537 aaPredicted RBP17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 PRRT4C9JH25 899 aa17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 TLL1O43897 1013 aa17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 ANGPTL1O95841 491 aa17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 C6P13671 934 aa17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 ZNF8P17098 575 aaPredicted RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms