RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 GADD45GO95257 159 aa12.77□□□□□ -0.37
HMGN1-216ENST00000486741 SDC1P18827 310 aa12.77□□□□□ -0.37
HMGN1-216ENST00000486741 RXRGP48443 463 aa12.77□□□□□ -0.37
HMGN1-216ENST00000486741 NCBP2P52298 156 aaKnown RBP eCLIP12.77□□□□□ -0.37
HMGN1-216ENST00000486741 PNLIPRP1P54315 467 aa12.77□□□□□ -0.37
HMGN1-216ENST00000486741 CDK6Q00534 326 aa12.77□□□□□ -0.37
HMGN1-216ENST00000486741 SP140Q13342 867 aa12.77□□□□□ -0.37
HMGN1-216ENST00000486741 CCSMST1Q4G0I0 132 aa12.77□□□□□ -0.37
HMGN1-216ENST00000486741 LCN8Q6JVE9 175 aa12.77□□□□□ -0.37
HMGN1-216ENST00000486741 ADGRG5Q8IZF4 528 aa12.77□□□□□ -0.37
HMGN1-216ENST00000486741 SVOPLQ8N434 492 aa12.77□□□□□ -0.37
HMGN1-216ENST00000486741 OR7G3Q8NG95 312 aa12.77□□□□□ -0.37
HMGN1-216ENST00000486741 NEIL2Q969S2 332 aa12.77□□□□□ -0.37
HMGN1-216ENST00000486741 MAELQ96JY0 434 aaKnown RBP12.77□□□□□ -0.37
HMGN1-216ENST00000486741 MACROD1Q9BQ69 325 aa12.77□□□□□ -0.37
HMGN1-216ENST00000486741 IL21Q9HBE4 155 aa12.77□□□□□ -0.37
HMGN1-216ENST00000486741 GULP1Q9UBP9 304 aa12.77□□□□□ -0.37
HMGN1-216ENST00000486741 ASCC3Q8N3C0 2202 aaKnown RBP12.77□□□□□ -0.37
HMGN1-216ENST00000486741 H3BNX3 289 aa12.77□□□□□ -0.37
HMGN1-216ENST00000486741 MYL12BO14950 172 aa12.77□□□□□ -0.37
HMGN1-216ENST00000486741 B4GAT1O43505 415 aa12.77□□□□□ -0.37
HMGN1-216ENST00000486741 RGS10O43665 173 aa12.77□□□□□ -0.37
HMGN1-216ENST00000486741 CYP17A1P05093 508 aa12.77□□□□□ -0.37
HMGN1-216ENST00000486741 IL3P08700 152 aa12.77□□□□□ -0.37
HMGN1-216ENST00000486741 HNRNPA1P09651 372 aaKnown RBP eCLIP12.77□□□□□ -0.37
HMGN1-216ENST00000486741 C1GALT1C1LP0DN25 315 aa12.77□□□□□ -0.37
HMGN1-216ENST00000486741 ALOX12P18054 663 aa12.77□□□□□ -0.37
HMGN1-216ENST00000486741 UGT2B15P54855 530 aa12.77□□□□□ -0.37
HMGN1-216ENST00000486741 MC1RQ01726 317 aa12.77□□□□□ -0.37
HMGN1-216ENST00000486741 ZNF763Q0D2J5 394 aa12.77□□□□□ -0.37
HMGN1-216ENST00000486741 PRR23CQ6ZRP0 262 aa12.77□□□□□ -0.37
HMGN1-216ENST00000486741 ANKRD33Q7Z3H0 272 aa12.77□□□□□ -0.37
HMGN1-216ENST00000486741 SLC34A3Q8N130 599 aa12.77□□□□□ -0.37
HMGN1-216ENST00000486741 PELI3Q8N2H9 469 aa12.77□□□□□ -0.37
HMGN1-216ENST00000486741 RASGEF1AQ8N9B8 481 aa12.77□□□□□ -0.37
HMGN1-216ENST00000486741 SMPDL3AQ92484 453 aa12.77□□□□□ -0.37
HMGN1-216ENST00000486741 CLN6Q9NWW5 311 aa12.77□□□□□ -0.37
HMGN1-216ENST00000486741 TEKT2Q9UIF3 430 aa12.77□□□□□ -0.37
HMGN1-216ENST00000486741 TBX21Q9UL17 535 aa12.77□□□□□ -0.37
HMGN1-216ENST00000486741 TET1Q8NFU7 2136 aa12.77□□□□□ -0.37
HMGN1-216ENST00000486741 LOC100130705A0A1B0GUX0 176 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 C7orf72A4D263 438 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 TMEM202A6NGA9 273 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 H3BNC9 293 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 VNN2O95498 520 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 AOAHP28039 575 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 SERPINB1P30740 379 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 CDK9P50750 372 aaKnown RBP12.76□□□□□ -0.37
HMGN1-216ENST00000486741 GRIK2Q13002 908 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 DGUOKQ16854 277 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 ZNF542PQ5EBM4 170 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 LIPJQ5W064 366 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 NEK5Q6P3R8 708 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 CCDC80Q76M96 950 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 TRIM69Q86WT6 500 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 ZNF683Q8IZ20 524 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 OR8J3Q8NGG0 315 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 HM13Q8TCT9 377 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 TRIM39Q9HCM9 518 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 CD320Q9NPF0 282 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 ZNF232Q9UNY5 417 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 SATB2Q9UPW6 733 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 PLXNB2O15031 1838 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 A0A1W2PPW3 197 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 HNRNPCL2B2RXH8 293 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 MITFO75030 526 aaPredicted RBP12.76□□□□□ -0.37
HMGN1-216ENST00000486741 UGT2B17O75795 530 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 ETFAP13804 333 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 PTX3P26022 381 aaPredicted RBP12.76□□□□□ -0.37
HMGN1-216ENST00000486741 RYKP34925 604 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 TAS2R41P59536 307 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 ILF3Q12906 894 aaKnown RBP eCLIP12.76□□□□□ -0.37
HMGN1-216ENST00000486741 BNIP3Q12983 259 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 RUNX3Q13761 415 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 NR1D2Q14995 579 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 ATP6AP1Q15904 470 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 BHLHB9Q6PI77 547 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 SLCO6A1Q86UG4 719 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 GPR65Q8IYL9 337 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 DEFB119Q8N690 84 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 PDPRQ8NCN5 879 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 CNIH3Q8TBE1 160 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 FRS2Q8WU20 508 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 ADAP2Q9NPF8 381 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 THUMPD1Q9NXG2 353 aaKnown RBP12.76□□□□□ -0.37
HMGN1-216ENST00000486741 AASSQ9UDR5 926 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 HS3ST2Q9Y278 367 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 ADAMDEC1O15204 470 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 CCNYL3P0C7X3 344 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 MPC1LP0DKB6 136 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 KDELR2P33947 212 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 ACVR1Q04771 509 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 NCF4Q15080 339 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 TEAD4Q15561 434 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 VMACQ2NL98 169 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 CYBRD1Q53TN4 286 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 GALNT18Q6P9A2 607 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 DCUN1D3Q8IWE4 304 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 LGI4Q8N135 537 aa12.76□□□□□ -0.37
HMGN1-216ENST00000486741 OR10G2Q8NGC3 310 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms